BLASTX nr result
ID: Coptis24_contig00009264
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00009264
(504 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002523488.1| conserved hypothetical protein [Ricinus comm... 48 1e-11
ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|2... 52 5e-10
emb|CBI27491.3| unnamed protein product [Vitis vinifera] 45 6e-10
ref|XP_002269567.2| PREDICTED: uncharacterized protein LOC100251... 45 6e-10
ref|XP_003631315.1| PREDICTED: uncharacterized protein LOC100265... 46 1e-09
>ref|XP_002523488.1| conserved hypothetical protein [Ricinus communis]
gi|223537316|gb|EEF38947.1| conserved hypothetical
protein [Ricinus communis]
Length = 1335
Score = 47.8 bits (112), Expect(2) = 1e-11
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = +2
Query: 2 WKKLGVVKLGELDFSFGSGMVDFCKLEEWNLRGQKFFNKGNYEAALLCFKRSGD 163
W KL +V + ELD F + EEW RG KFF++ NY+ A CF+R+G+
Sbjct: 615 WLKLQLVHVRELDDKFLEEIQVTSSQEEWKARGIKFFHQMNYDQARFCFERAGE 668
Score = 46.6 bits (109), Expect(2) = 1e-11
Identities = 25/68 (36%), Positives = 35/68 (51%)
Frame = +1
Query: 139 FVLQKIWRRLRSKWAQAASLQMEGENKRHKDFEMAATCLSNAAELYEEIGKFESSVACFL 318
F ++ KWA AA + +N R D +A L+ A ++E IGK ES+V CF
Sbjct: 661 FCFERAGESYWEKWAVAAGHRCTADNLRVSDPIIARVHLTQGAHMFESIGKNESAVQCFF 720
Query: 319 KAGNYEKA 342
+ YEKA
Sbjct: 721 ELKEYEKA 728
>ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|222851386|gb|EEE88933.1|
predicted protein [Populus trichocarpa]
Length = 1950
Score = 52.4 bits (124), Expect(2) = 5e-10
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Frame = +2
Query: 2 WKKLGVVKLGELDFSFGSGMVDFCKLEEWNLRGQKFFNKGNYEAALLCFKRSGD-----V 166
W K G+V++ +LD S M EEW +G K +GNYE A +CF+R+GD +
Sbjct: 1509 WTKKGLVQVRKLDDSLAQAMQVSSSPEEWKSQGYKLLREGNYEMATMCFERAGDEHGEKL 1568
Query: 167 SARNGHR 187
S GH+
Sbjct: 1569 SKAAGHK 1575
Score = 36.2 bits (82), Expect(2) = 5e-10
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1
Query: 175 KWAQAASLQMEGENKRHKDFEMAATCLSNAAELYEEIGKFESSVACFLKAGNYEKA 342
K ++AA + + + EMA+ AAE++E IGK E + CF Y++A
Sbjct: 1567 KLSKAAGHKAAADRMHSSNPEMASVARRQAAEIFESIGKAEYAAECFYMLKEYDRA 1622
>emb|CBI27491.3| unnamed protein product [Vitis vinifera]
Length = 6100
Score = 45.4 bits (106), Expect(2) = 6e-10
Identities = 20/55 (36%), Positives = 34/55 (61%)
Frame = +2
Query: 2 WKKLGVVKLGELDFSFGSGMVDFCKLEEWNLRGQKFFNKGNYEAALLCFKRSGDV 166
W+KL ++++ L GM + +EW +G K F++ NYE A LCF+++GD+
Sbjct: 882 WEKLSLIQVRCLHDLVAQGMQVASRPDEWRSQGFKLFHEHNYEMARLCFEKAGDM 936
Score = 42.7 bits (99), Expect(2) = 6e-10
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +1
Query: 175 KWAQAASLQMEGENKRHKDFEMAATCLSNAAELYEEIGKFESSVACFLKAGNYEKA 342
K+A+AASLQ + +MA LS AA+++E IGK E + CF + +YE+A
Sbjct: 940 KFARAASLQALAISISSSSPQMAKNYLSEAADMFEGIGKAEYAAKCFFEMRSYERA 995
Score = 43.1 bits (100), Expect(2) = 2e-08
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +2
Query: 2 WKKLGVVKLGELDFSFGSGMVDFCKLEEWNLRGQKFFNKGNYEAALLCFKRSGD 163
WKKL V++ +LD S + M+ +EW G K + +YE A CF+R+ D
Sbjct: 5054 WKKLCCVQVTQLDESLANAMLVASTPDEWKAMGMKLLREHHYEMATRCFERAED 5107
Score = 40.0 bits (92), Expect(2) = 2e-08
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = +1
Query: 157 WRRLRSKWAQAASLQMEGENKRHKDFEMAATCLSNAAELYEEIGKFESSVACFLKAGNYE 336
W RL A+A L+ E KR + + A L AAE++EEIG+ + C+ + YE
Sbjct: 5110 WARL----AKAHGLKAAAEQKRDLNPDAAHVDLRKAAEIFEEIGQAHPAAKCYFELNEYE 5165
Query: 337 KA 342
+A
Sbjct: 5166 RA 5167
Score = 45.4 bits (106), Expect(2) = 3e-07
Identities = 20/55 (36%), Positives = 34/55 (61%)
Frame = +2
Query: 2 WKKLGVVKLGELDFSFGSGMVDFCKLEEWNLRGQKFFNKGNYEAALLCFKRSGDV 166
W+KL ++++ L GM + +EW +G K F++ NYE A LCF+++GD+
Sbjct: 2500 WEKLCLIQVRCLHDLVAQGMQVASRRDEWRSQGFKLFHENNYEMARLCFEKAGDM 2554
Score = 33.5 bits (75), Expect(2) = 3e-07
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 175 KWAQAASLQMEGENKRHKDFEMAATCLSNAAELYEEIGKFESSVACFL-KAG 327
K+A+AASLQ + +MA LS AA+++E IGK E + L KAG
Sbjct: 2558 KFARAASLQALANSISSSSPQMAKNYLSEAADMFEGIGKAEYAANSMLDKAG 2609
>ref|XP_002269567.2| PREDICTED: uncharacterized protein LOC100251075 [Vitis vinifera]
Length = 2818
Score = 45.4 bits (106), Expect(2) = 6e-10
Identities = 20/55 (36%), Positives = 34/55 (61%)
Frame = +2
Query: 2 WKKLGVVKLGELDFSFGSGMVDFCKLEEWNLRGQKFFNKGNYEAALLCFKRSGDV 166
W+KL ++++ L GM + +EW +G K F++ NYE A LCF+++GD+
Sbjct: 1752 WEKLSLIQVRCLHDLVAQGMQVASRPDEWRSQGFKLFHEHNYEMARLCFEKAGDM 1806
Score = 42.7 bits (99), Expect(2) = 6e-10
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +1
Query: 175 KWAQAASLQMEGENKRHKDFEMAATCLSNAAELYEEIGKFESSVACFLKAGNYEKA 342
K+A+AASLQ + +MA LS AA+++E IGK E + CF + +YE+A
Sbjct: 1810 KFARAASLQALAISISSSSPQMAKNYLSEAADMFEGIGKAEYAAKCFFEMRSYERA 1865
>ref|XP_003631315.1| PREDICTED: uncharacterized protein LOC100265010 [Vitis vinifera]
Length = 2792
Score = 45.8 bits (107), Expect(2) = 1e-09
Identities = 25/62 (40%), Positives = 34/62 (54%)
Frame = +1
Query: 157 WRRLRSKWAQAASLQMEGENKRHKDFEMAATCLSNAAELYEEIGKFESSVACFLKAGNYE 336
W RL A+A L+ E KRH + E A L AAE++EEIG+ + CF + YE
Sbjct: 1711 WARL----AKAHGLKAAAEQKRHLNPEAAHVDLRKAAEIFEEIGEARPAAKCFFQLNEYE 1766
Query: 337 KA 342
+A
Sbjct: 1767 RA 1768
Score = 41.6 bits (96), Expect(2) = 1e-09
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +2
Query: 2 WKKLGVVKLGELDFSFGSGMVDFCKLEEWNLRGQKFFNKGNYEAALLCFKRSGD 163
WKKL +V++ +LD S + M EEW G K + +YE A CF+R+ D
Sbjct: 1655 WKKLCLVQVTQLDESLANEMRVASTPEEWKATGIKLLREHHYEMATRCFERAED 1708