BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009261
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   139   2e-31
ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   133   1e-29
ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
ref|XP_002532829.1| dead box ATP-dependent RNA helicase, putativ...   128   6e-28
ref|XP_002870205.1| hypothetical protein ARALYDRAFT_493299 [Arab...   122   3e-26

>ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Vitis vinifera]
           gi|297740757|emb|CBI30939.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score =  139 bits (350), Expect = 2e-31
 Identities = 63/80 (78%), Positives = 70/80 (87%)
 Frame = +1

Query: 82  KKQNRVAVLPWMRSPVDVSLIEECSLKLVPCLDPRLEEALERMGFSSLFPIQVAAWQETI 261
           K++  V VLPWMRSP+DVSL EEC L L PCLDPRLE AL+ MGFSSLFP+QVA WQET+
Sbjct: 5   KQKKNVPVLPWMRSPIDVSLFEECPLHLFPCLDPRLEVALKNMGFSSLFPVQVAVWQETV 64

Query: 262 GPGAFDRDLCINSPTGSGKT 321
           GPGAF+RDLCINSPTGSGKT
Sbjct: 65  GPGAFERDLCINSPTGSGKT 84


>ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus] gi|449490565|ref|XP_004158642.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus]
          Length = 517

 Score =  133 bits (335), Expect = 1e-29
 Identities = 63/84 (75%), Positives = 73/84 (86%), Gaps = 1/84 (1%)
 Frame = +1

Query: 73  MADK-KQNRVAVLPWMRSPVDVSLIEECSLKLVPCLDPRLEEALERMGFSSLFPIQVAAW 249
           MADK K+ R+ VLPWMRSPVDVSLIEEC L+++P LD RL+ AL+ MG SSLFP+Q+A W
Sbjct: 1   MADKQKRKRIPVLPWMRSPVDVSLIEECPLEILPMLDHRLKAALQNMGISSLFPVQLAVW 60

Query: 250 QETIGPGAFDRDLCINSPTGSGKT 321
           QE IGPG+FDRDLCINSPTGSGKT
Sbjct: 61  QEAIGPGSFDRDLCINSPTGSGKT 84


>ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|222848405|gb|EEE85952.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  129 bits (323), Expect = 3e-28
 Identities = 60/80 (75%), Positives = 69/80 (86%), Gaps = 1/80 (1%)
 Frame = +1

Query: 85  KQNR-VAVLPWMRSPVDVSLIEECSLKLVPCLDPRLEEALERMGFSSLFPIQVAAWQETI 261
           KQN+ V VLPWMRSPVDVS  EE  L ++PCLDPRL+ AL+ MGF +LFP+Q+A WQETI
Sbjct: 8   KQNKNVPVLPWMRSPVDVSKFEEYPLDILPCLDPRLKMALQNMGFKTLFPVQIAVWQETI 67

Query: 262 GPGAFDRDLCINSPTGSGKT 321
           GPGAF+RDLCINSPTGSGKT
Sbjct: 68  GPGAFERDLCINSPTGSGKT 87


>ref|XP_002532829.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223527420|gb|EEF29559.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 469

 Score =  128 bits (321), Expect = 6e-28
 Identities = 58/79 (73%), Positives = 66/79 (83%)
 Frame = +1

Query: 85  KQNRVAVLPWMRSPVDVSLIEECSLKLVPCLDPRLEEALERMGFSSLFPIQVAAWQETIG 264
           ++  V VLPWMR PVD+   EECSL LVPCLDPRL+ ALE MGF+SLF +QVA WQETIG
Sbjct: 7   EKKNVPVLPWMRCPVDIKQFEECSLDLVPCLDPRLKVALENMGFTSLFAVQVAVWQETIG 66

Query: 265 PGAFDRDLCINSPTGSGKT 321
           PG F+RDLCIN+PTGSGKT
Sbjct: 67  PGNFERDLCINAPTGSGKT 85


>ref|XP_002870205.1| hypothetical protein ARALYDRAFT_493299 [Arabidopsis lyrata subsp.
           lyrata] gi|297316041|gb|EFH46464.1| hypothetical protein
           ARALYDRAFT_493299 [Arabidopsis lyrata subsp. lyrata]
          Length = 522

 Score =  122 bits (306), Expect = 3e-26
 Identities = 51/74 (68%), Positives = 66/74 (89%)
 Frame = +1

Query: 100 AVLPWMRSPVDVSLIEECSLKLVPCLDPRLEEALERMGFSSLFPIQVAAWQETIGPGAFD 279
           +V+PWMR+PVDVS +E C+L+ +PCL+P+L++ALE MG SSLFP+QVA W ETIGPG F+
Sbjct: 13  SVVPWMRAPVDVSNVENCALETLPCLNPKLKKALENMGISSLFPVQVAVWHETIGPGGFE 72

Query: 280 RDLCINSPTGSGKT 321
           RD+C+NSPTGSGKT
Sbjct: 73  RDICVNSPTGSGKT 86