BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009260
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   131   5e-29
ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   125   3e-27
ref|XP_002532829.1| dead box ATP-dependent RNA helicase, putativ...   123   1e-26
ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|2...   123   1e-26
ref|XP_002870205.1| hypothetical protein ARALYDRAFT_493299 [Arab...   115   3e-24

>ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Vitis vinifera]
           gi|297740757|emb|CBI30939.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score =  131 bits (330), Expect = 5e-29
 Identities = 60/77 (77%), Positives = 67/77 (87%)
 Frame = -2

Query: 231 KSVAVLPWMRSPVDVSLIEECSLKLLPFLDPRLEEALERMGFTSLFPIQVAAWQETIGPA 52
           K+V VLPWMRSP+DVSL EEC L L P LDPRLE AL+ MGF+SLFP+QVA WQET+GP 
Sbjct: 8   KNVPVLPWMRSPIDVSLFEECPLHLFPCLDPRLEVALKNMGFSSLFPVQVAVWQETVGPG 67

Query: 51  AFDRDLCINSPTGSGKT 1
           AF+RDLCINSPTGSGKT
Sbjct: 68  AFERDLCINSPTGSGKT 84


>ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus] gi|449490565|ref|XP_004158642.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus]
          Length = 517

 Score =  125 bits (315), Expect = 3e-27
 Identities = 57/77 (74%), Positives = 66/77 (85%)
 Frame = -2

Query: 231 KSVAVLPWMRSPVDVSLIEECSLKLLPFLDPRLEEALERMGFTSLFPIQVAAWQETIGPA 52
           K + VLPWMRSPVDVSLIEEC L++LP LD RL+ AL+ MG +SLFP+Q+A WQE IGP 
Sbjct: 8   KRIPVLPWMRSPVDVSLIEECPLEILPMLDHRLKAALQNMGISSLFPVQLAVWQEAIGPG 67

Query: 51  AFDRDLCINSPTGSGKT 1
           +FDRDLCINSPTGSGKT
Sbjct: 68  SFDRDLCINSPTGSGKT 84


>ref|XP_002532829.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223527420|gb|EEF29559.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 469

 Score =  123 bits (309), Expect = 1e-26
 Identities = 57/77 (74%), Positives = 64/77 (83%)
 Frame = -2

Query: 231 KSVAVLPWMRSPVDVSLIEECSLKLLPFLDPRLEEALERMGFTSLFPIQVAAWQETIGPA 52
           K+V VLPWMR PVD+   EECSL L+P LDPRL+ ALE MGFTSLF +QVA WQETIGP 
Sbjct: 9   KNVPVLPWMRCPVDIKQFEECSLDLVPCLDPRLKVALENMGFTSLFAVQVAVWQETIGPG 68

Query: 51  AFDRDLCINSPTGSGKT 1
            F+RDLCIN+PTGSGKT
Sbjct: 69  NFERDLCINAPTGSGKT 85


>ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|222848405|gb|EEE85952.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  123 bits (309), Expect = 1e-26
 Identities = 57/78 (73%), Positives = 66/78 (84%)
 Frame = -2

Query: 234 DKSVAVLPWMRSPVDVSLIEECSLKLLPFLDPRLEEALERMGFTSLFPIQVAAWQETIGP 55
           +K+V VLPWMRSPVDVS  EE  L +LP LDPRL+ AL+ MGF +LFP+Q+A WQETIGP
Sbjct: 10  NKNVPVLPWMRSPVDVSKFEEYPLDILPCLDPRLKMALQNMGFKTLFPVQIAVWQETIGP 69

Query: 54  AAFDRDLCINSPTGSGKT 1
            AF+RDLCINSPTGSGKT
Sbjct: 70  GAFERDLCINSPTGSGKT 87


>ref|XP_002870205.1| hypothetical protein ARALYDRAFT_493299 [Arabidopsis lyrata subsp.
           lyrata] gi|297316041|gb|EFH46464.1| hypothetical protein
           ARALYDRAFT_493299 [Arabidopsis lyrata subsp. lyrata]
          Length = 522

 Score =  115 bits (289), Expect = 3e-24
 Identities = 49/74 (66%), Positives = 64/74 (86%)
 Frame = -2

Query: 222 AVLPWMRSPVDVSLIEECSLKLLPFLDPRLEEALERMGFTSLFPIQVAAWQETIGPAAFD 43
           +V+PWMR+PVDVS +E C+L+ LP L+P+L++ALE MG +SLFP+QVA W ETIGP  F+
Sbjct: 13  SVVPWMRAPVDVSNVENCALETLPCLNPKLKKALENMGISSLFPVQVAVWHETIGPGGFE 72

Query: 42  RDLCINSPTGSGKT 1
           RD+C+NSPTGSGKT
Sbjct: 73  RDICVNSPTGSGKT 86