BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009255
         (978 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276719.1| PREDICTED: 50S ribosomal protein L9 [Vitis v...   228   1e-57
ref|XP_002332160.1| predicted protein [Populus trichocarpa] gi|2...   224   2e-56
ref|XP_003527412.1| PREDICTED: 50S ribosomal protein L9-like iso...   223   5e-56
gb|AFK34975.1| unknown [Lotus japonicus]                              222   9e-56
gb|ACU17789.1| unknown [Glycine max]                                  222   9e-56

>ref|XP_002276719.1| PREDICTED: 50S ribosomal protein L9 [Vitis vinifera]
           gi|302143920|emb|CBI23025.3| unnamed protein product
           [Vitis vinifera]
          Length = 217

 Score =  228 bits (582), Expect = 1e-57
 Identities = 121/221 (54%), Positives = 161/221 (72%), Gaps = 7/221 (3%)
 Frame = -2

Query: 872 MANLKTGTRNVLRQLIKTHNNIQTQDSITHPFYNLGQGLRYKHKKLEVILTTSIDKLGKA 693
           MA ++ G RN+LR ++K   + Q  D + +P   + QG+RY+  KLEVILTT+IDKLGKA
Sbjct: 1   MAYMQYG-RNILRHIVKDVGS-QCSDRVVNPLLYVCQGVRYR--KLEVILTTNIDKLGKA 56

Query: 692 GETVKVAPGYFRNYLMPNILAVPNIAKYDFIMREQRKLYQREEVEVVKEVPQAKQDTIKE 513
           GETVKVAPGYFRN+LMP +LAVPNI K+ +++ EQRKLYQ EEVE VKEV + ++D +KE
Sbjct: 57  GETVKVAPGYFRNHLMPKLLAVPNIEKFAYLISEQRKLYQPEEVEEVKEVVETEEDKMKE 116

Query: 512 FEQAANRLEKANLVLRRMVK-------SSSDLNELRSPVTKEELVAEVSRQLCVNIGPEN 354
           +  AA RLE   +  RR +K          +  ELRSP+TK++LVAEV+RQL V + PE+
Sbjct: 117 YHTAAKRLETTRVAFRRFIKFEKGQPVRKGEPLELRSPITKDDLVAEVARQLSVQVEPES 176

Query: 353 LHLPSSISSFGQYDIQLLFPKAIRLPEGKVKWTLNVKIRRK 231
           LHLPS ++  G++++ L  PK+I LPEGKV+WTL VKIR K
Sbjct: 177 LHLPSPLTHVGEFEVPLRLPKSIPLPEGKVRWTLKVKIRCK 217


>ref|XP_002332160.1| predicted protein [Populus trichocarpa] gi|222875210|gb|EEF12341.1|
           predicted protein [Populus trichocarpa]
          Length = 219

 Score =  224 bits (571), Expect = 2e-56
 Identities = 116/215 (53%), Positives = 154/215 (71%), Gaps = 8/215 (3%)
 Frame = -2

Query: 851 TRNVLRQLIKTHNNIQTQDSITHPFYNLGQGLRYKHKKLEVILTTSIDKLGKAGETVKVA 672
           +RN LR+++    N+++ D   HP     QG+RYK  KLEVILTTSI+KLGKAG+TVKVA
Sbjct: 7   SRNALRRIVAKETNLKSSDGAIHPLLYACQGVRYK--KLEVILTTSIEKLGKAGQTVKVA 64

Query: 671 PGYFRNYLMPNILAVPNIAKYDFIMREQRKLYQREEVEVVKEVPQAKQDTIKEFEQAANR 492
           PG+FRN+LMP +LAVPNI K+  ++REQRK+YQ EE E VK V +  +D +KE+E AA R
Sbjct: 65  PGHFRNHLMPKLLAVPNIEKFAHLIREQRKIYQPEEEEEVKVVKETMEDKMKEYETAAKR 124

Query: 491 LEKANLVLR--------RMVKSSSDLNELRSPVTKEELVAEVSRQLCVNIGPENLHLPSS 336
           L KA L  R        R  +S  D  E+ SPVTK++++ EV+RQ  V I P+N+HLPS 
Sbjct: 125 LVKAQLAFRVGINTAKFRARESKDDPIEILSPVTKDDILKEVTRQFNVQIEPDNVHLPSP 184

Query: 335 ISSFGQYDIQLLFPKAIRLPEGKVKWTLNVKIRRK 231
           +++ G++++ L FPK+I LPEGKVKWTL VKIR K
Sbjct: 185 LTALGEFEVPLRFPKSIPLPEGKVKWTLKVKIRGK 219


>ref|XP_003527412.1| PREDICTED: 50S ribosomal protein L9-like isoform 1 [Glycine max]
           gi|356517476|ref|XP_003527413.1| PREDICTED: 50S
           ribosomal protein L9-like isoform 2 [Glycine max]
          Length = 222

 Score =  223 bits (568), Expect = 5e-56
 Identities = 119/219 (54%), Positives = 158/219 (72%), Gaps = 11/219 (5%)
 Frame = -2

Query: 854 GTRNVLRQLIKTHNNIQTQDSITHPFYNLGQGLRYKHKKLEVILTTSIDKLGKAGETVKV 675
           G R VLR    + +N+     + +P     QGLRYK +KL+VILTT IDKLGKAG+TVKV
Sbjct: 10  GVRQVLRFRDASCDNV-----VVNPLLYASQGLRYK-RKLQVILTTDIDKLGKAGDTVKV 63

Query: 674 APGYFRNYLMPNILAVPNIAKYDFIMREQRKLYQ---REEVEVVKEVPQAKQDTIKEFEQ 504
           APGYFRN+LMP +LA PNI K+ +++ EQRK+YQ    E+ E V  V ++K+D +KE+E+
Sbjct: 64  APGYFRNHLMPKLLAFPNIDKFAYLLNEQRKIYQPTEEEKQEDVTLVKESKEDMMKEYEK 123

Query: 503 AANRLEKANLVLRRMV--------KSSSDLNELRSPVTKEELVAEVSRQLCVNIGPENLH 348
           AA RL+KA LVLRR++        +S  D  ELR PVTK+ LVAEV+RQLCVN+ P+NLH
Sbjct: 124 AALRLDKAQLVLRRLINVQKAKSRESKEDPLELRYPVTKDTLVAEVARQLCVNVAPDNLH 183

Query: 347 LPSSISSFGQYDIQLLFPKAIRLPEGKVKWTLNVKIRRK 231
           LPS +S+ G+Y++ L  P++I LPEGKV W+L VK+R K
Sbjct: 184 LPSPLSTLGEYEVPLRIPRSIPLPEGKVNWSLKVKVRSK 222


>gb|AFK34975.1| unknown [Lotus japonicus]
          Length = 222

 Score =  222 bits (566), Expect = 9e-56
 Identities = 119/217 (54%), Positives = 160/217 (73%), Gaps = 14/217 (6%)
 Frame = -2

Query: 839 LRQLIKTHNNIQTQDSITHPFYNLGQGLRYKHKKLEVILTTSIDKLGKAGETVKVAPGYF 660
           +RQ+I+  ++  +  ++ +P     QGLRY ++KL+VILTT IDKLGKAG+TVKVAPGYF
Sbjct: 11  VRQIIRFRDS-SSNSAVVNPLLYASQGLRY-NRKLQVILTTDIDKLGKAGDTVKVAPGYF 68

Query: 659 RNYLMPNILAVPNIAKYDFIMREQRKLYQ------REEVEVVKEVPQAKQDTIKEFEQAA 498
           RN+LMP +LAVPNI K+ +++ EQRK+YQ      +E+V VVKE   +K+D +KE+E AA
Sbjct: 69  RNHLMPKLLAVPNIDKFAYLLTEQRKIYQPTEEEKQEDVTVVKE---SKEDLMKEYEAAA 125

Query: 497 NRLEKANLVLRRMVK--------SSSDLNELRSPVTKEELVAEVSRQLCVNIGPENLHLP 342
            RL+KA LVLRR++         S  +  E+R PVTKE LVAEV+RQLCVNI PENLHLP
Sbjct: 126 LRLDKAKLVLRRLIDVKKAKARASKDEPLEIRLPVTKEVLVAEVARQLCVNIAPENLHLP 185

Query: 341 SSISSFGQYDIQLLFPKAIRLPEGKVKWTLNVKIRRK 231
           S +S+ G+Y++ L  P++I LPEGKV W+L VK+R K
Sbjct: 186 SPLSTVGEYEVPLRLPRSIPLPEGKVNWSLQVKVRSK 222


>gb|ACU17789.1| unknown [Glycine max]
          Length = 222

 Score =  222 bits (566), Expect = 9e-56
 Identities = 116/217 (53%), Positives = 159/217 (73%), Gaps = 11/217 (5%)
 Frame = -2

Query: 848 RNVLRQLIKTHNNIQTQDSITHPFYNLGQGLRYKHKKLEVILTTSIDKLGKAGETVKVAP 669
           R+ +RQ+++   +    + + +P     QGLRYK +KL+VILTT IDKLGKAG+TVKVAP
Sbjct: 8   RHSVRQVLR-FRDASCDNVVVNPLLYASQGLRYK-RKLQVILTTDIDKLGKAGDTVKVAP 65

Query: 668 GYFRNYLMPNILAVPNIAKYDFIMREQRKLYQ---REEVEVVKEVPQAKQDTIKEFEQAA 498
           GYFRN+LMP +LA PNI K+ +++ EQRK+YQ    E+ E V  V ++K+D +KE+E+AA
Sbjct: 66  GYFRNHLMPKLLAFPNIDKFAYLLNEQRKIYQPTEEEKQEDVTLVKESKEDMMKEYEKAA 125

Query: 497 NRLEKANLVLRRMV--------KSSSDLNELRSPVTKEELVAEVSRQLCVNIGPENLHLP 342
            RL+KA LVLRR++        +S  D  ELR PVTK+ LVAEV+RQLCVN+ P+NLHLP
Sbjct: 126 LRLDKAQLVLRRLINVQKAKSRESKEDPLELRYPVTKDTLVAEVARQLCVNVAPDNLHLP 185

Query: 341 SSISSFGQYDIQLLFPKAIRLPEGKVKWTLNVKIRRK 231
           S +S+ G+Y++ L  P++I LPEGKV W+L VK+R K
Sbjct: 186 SPLSTLGEYEVPLRIPRSIPLPEGKVNWSLKVKVRSK 222