BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009247
         (1199 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCG20383.1| Ran GTPase activating protein 2 [Solanum vernei]      352   1e-94
emb|CCG20366.1| Ran GTPase activating protein 2 [Solanum tuberosum]   352   1e-94
emb|CCG20358.1| Ran GTPase activating protein 2 [Solanum tuberos...   352   1e-94
emb|CCG20357.1| Ran GTPase activating protein 2 [Solanum tuberosum]   352   1e-94
emb|CCG20319.1| Ran GTPase activating protein 2 [Solanum phureja]     352   1e-94

>emb|CCG20383.1| Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score =  352 bits (902), Expect = 1e-94
 Identities = 191/304 (62%), Positives = 222/304 (73%), Gaps = 6/304 (1%)
 Frame = -1

Query: 1199 QGSLEELHLENNGISEEAAQAVYELIPSTEKLKVLHFHNNMTGDEGAIPISEVVKRSPAL 1020
            Q +LEEL L N+GIS+EAA AV EL+PSTEKLKVLHFHNNMTGDEGA+ I+E+VKRSP L
Sbjct: 241  QTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLL 300

Query: 1019 EDFRCSSTRVGSKGGLTLIEALRTCTNLKKLDLKDNMFDVGAGVALSKALSSHVGLVEIY 840
            EDFRCSSTRVGS+GG  L EAL  C++LKKLDL+DNMF    G+ L KALS H  L EIY
Sbjct: 301  EDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIY 360

Query: 839  LSYLNFEDNGAIAIANALQEFAPSLKVLDMAGNEITXXXXXXXXXXXASKQSLTKLNLSD 660
            LSYLN ED GAIAIANAL++ APSL VL+MAGN+IT           A+KQ L KL+L +
Sbjct: 361  LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGE 420

Query: 659  NELKDKGAILICKALEGHNQLKEVDMSANKIRRAGARVMGQTVIHKPEFKLLEINGNFIS 480
            NELKD+GAI I KALEGHN L EVDMS+N +RRAGARV+ QTV+HK EFKLL +NGNFIS
Sbjct: 421  NELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFIS 480

Query: 479  DEGIDELNEMFKKNPEMLGRL------XXXXXXXXXXXXXXXXXXXXXXXELGSKLQNLE 318
            +EG+DEL E+FKK+PEML  L                             EL SKL+NL+
Sbjct: 481  EEGVDELKEIFKKSPEMLASLEDNDPEGEDKDDEEDEEKESGDEGKDVEDELESKLKNLD 540

Query: 317  VSQE 306
            V QE
Sbjct: 541  VKQE 544


>emb|CCG20366.1| Ran GTPase activating protein 2 [Solanum tuberosum]
          Length = 553

 Score =  352 bits (902), Expect = 1e-94
 Identities = 191/304 (62%), Positives = 222/304 (73%), Gaps = 6/304 (1%)
 Frame = -1

Query: 1199 QGSLEELHLENNGISEEAAQAVYELIPSTEKLKVLHFHNNMTGDEGAIPISEVVKRSPAL 1020
            Q +LEEL L N+GIS+EAA AV EL+PSTEKLKVLHFHNNMTGDEGA+ I+E+VKRSP L
Sbjct: 241  QTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLL 300

Query: 1019 EDFRCSSTRVGSKGGLTLIEALRTCTNLKKLDLKDNMFDVGAGVALSKALSSHVGLVEIY 840
            EDFRCSSTRVGS+GG  L EAL  C++LKKLDL+DNMF    G+ L KALS H  L EIY
Sbjct: 301  EDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIY 360

Query: 839  LSYLNFEDNGAIAIANALQEFAPSLKVLDMAGNEITXXXXXXXXXXXASKQSLTKLNLSD 660
            LSYLN ED GAIAIANAL++ APSL VL+MAGN+IT           A+KQ L KL+L +
Sbjct: 361  LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGE 420

Query: 659  NELKDKGAILICKALEGHNQLKEVDMSANKIRRAGARVMGQTVIHKPEFKLLEINGNFIS 480
            NELKD+GAI I KALEGHN L EVDMS+N +RRAGARV+ QTV+HK EFKLL +NGNFIS
Sbjct: 421  NELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFIS 480

Query: 479  DEGIDELNEMFKKNPEMLGRL------XXXXXXXXXXXXXXXXXXXXXXXELGSKLQNLE 318
            +EG+DEL E+FKK+PEML  L                             EL SKL+NL+
Sbjct: 481  EEGVDELKEIFKKSPEMLASLEDNDPEGEDEDDEEDEEKESGDEGKDVEDELESKLKNLD 540

Query: 317  VSQE 306
            V QE
Sbjct: 541  VKQE 544


>emb|CCG20358.1| Ran GTPase activating protein 2 [Solanum tuberosum]
            gi|399498088|emb|CCG20372.1| Ran GTPase activating
            protein 2 [Solanum tuberosum]
            gi|399498108|emb|CCG20382.1| Ran GTPase activating
            protein 2 [Solanum vernei] gi|399498118|emb|CCG20387.1|
            Ran GTPase activating protein 2 [Solanum vernei]
          Length = 553

 Score =  352 bits (902), Expect = 1e-94
 Identities = 191/304 (62%), Positives = 222/304 (73%), Gaps = 6/304 (1%)
 Frame = -1

Query: 1199 QGSLEELHLENNGISEEAAQAVYELIPSTEKLKVLHFHNNMTGDEGAIPISEVVKRSPAL 1020
            Q +LEEL L N+GIS+EAA AV EL+PSTEKLKVLHFHNNMTGDEGA+ I+E+VKRSP L
Sbjct: 241  QTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLL 300

Query: 1019 EDFRCSSTRVGSKGGLTLIEALRTCTNLKKLDLKDNMFDVGAGVALSKALSSHVGLVEIY 840
            EDFRCSSTRVGS+GG  L EAL  C++LKKLDL+DNMF    G+ L KALS H  L EIY
Sbjct: 301  EDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIY 360

Query: 839  LSYLNFEDNGAIAIANALQEFAPSLKVLDMAGNEITXXXXXXXXXXXASKQSLTKLNLSD 660
            LSYLN ED GAIAIANAL++ APSL VL+MAGN+IT           A+KQ L KL+L +
Sbjct: 361  LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGE 420

Query: 659  NELKDKGAILICKALEGHNQLKEVDMSANKIRRAGARVMGQTVIHKPEFKLLEINGNFIS 480
            NELKD+GAI I KALEGHN L EVDMS+N +RRAGARV+ QTV+HK EFKLL +NGNFIS
Sbjct: 421  NELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFIS 480

Query: 479  DEGIDELNEMFKKNPEMLGRL------XXXXXXXXXXXXXXXXXXXXXXXELGSKLQNLE 318
            +EG+DEL E+FKK+PEML  L                             EL SKL+NL+
Sbjct: 481  EEGVDELKEIFKKSPEMLASLEDNDPEGEDKDDEEDEEKESGDEGKDVEDELESKLKNLD 540

Query: 317  VSQE 306
            V QE
Sbjct: 541  VKQE 544


>emb|CCG20357.1| Ran GTPase activating protein 2 [Solanum tuberosum]
          Length = 553

 Score =  352 bits (902), Expect = 1e-94
 Identities = 191/304 (62%), Positives = 222/304 (73%), Gaps = 6/304 (1%)
 Frame = -1

Query: 1199 QGSLEELHLENNGISEEAAQAVYELIPSTEKLKVLHFHNNMTGDEGAIPISEVVKRSPAL 1020
            Q +LEEL L N+GIS+EAA AV EL+PSTEKLKVLHFHNNMTGDEGA+ I+E+VKRSP L
Sbjct: 241  QTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLL 300

Query: 1019 EDFRCSSTRVGSKGGLTLIEALRTCTNLKKLDLKDNMFDVGAGVALSKALSSHVGLVEIY 840
            EDFRCSSTRVGS+GG  L EAL  C++LKKLDL+DNMF    G+ L KALS H  L EIY
Sbjct: 301  EDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIY 360

Query: 839  LSYLNFEDNGAIAIANALQEFAPSLKVLDMAGNEITXXXXXXXXXXXASKQSLTKLNLSD 660
            LSYLN ED GAIAIANAL++ APSL VL+MAGN+IT           A+KQ L KL+L +
Sbjct: 361  LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGE 420

Query: 659  NELKDKGAILICKALEGHNQLKEVDMSANKIRRAGARVMGQTVIHKPEFKLLEINGNFIS 480
            NELKD+GAI I KALEGHN L EVDMS+N +RRAGARV+ QTV+HK EFKLL +NGNFIS
Sbjct: 421  NELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFIS 480

Query: 479  DEGIDELNEMFKKNPEMLGRL------XXXXXXXXXXXXXXXXXXXXXXXELGSKLQNLE 318
            +EG+DEL E+FKK+PEML  L                             EL SKL+NL+
Sbjct: 481  EEGVDELKEIFKKSPEMLASLEDNDPEGEDEDDEEDEEKESGDEGKDVEDELESKLKNLD 540

Query: 317  VSQE 306
            V QE
Sbjct: 541  VEQE 544


>emb|CCG20319.1| Ran GTPase activating protein 2 [Solanum phureja]
          Length = 553

 Score =  352 bits (902), Expect = 1e-94
 Identities = 191/304 (62%), Positives = 222/304 (73%), Gaps = 6/304 (1%)
 Frame = -1

Query: 1199 QGSLEELHLENNGISEEAAQAVYELIPSTEKLKVLHFHNNMTGDEGAIPISEVVKRSPAL 1020
            Q +LEEL L N+GIS+EAA AV EL+PSTEKLKVLHFHNNMTGDEGA+ I+E+VKRSP L
Sbjct: 241  QTNLEELFLMNDGISQEAANAVSELVPSTEKLKVLHFHNNMTGDEGAVAIAEIVKRSPLL 300

Query: 1019 EDFRCSSTRVGSKGGLTLIEALRTCTNLKKLDLKDNMFDVGAGVALSKALSSHVGLVEIY 840
            EDFRCSSTRVGS+GG  L EAL  C++LKKLDL+DNMF    G+ L KALS H  L EIY
Sbjct: 301  EDFRCSSTRVGSEGGSVLCEALGMCSHLKKLDLRDNMFGPEVGLVLCKALSKHENLTEIY 360

Query: 839  LSYLNFEDNGAIAIANALQEFAPSLKVLDMAGNEITXXXXXXXXXXXASKQSLTKLNLSD 660
            LSYLN ED GAIAIANAL++ APSL VL+MAGN+IT           A+KQ L KL+L +
Sbjct: 361  LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAAPAIASCIAAKQLLAKLSLGE 420

Query: 659  NELKDKGAILICKALEGHNQLKEVDMSANKIRRAGARVMGQTVIHKPEFKLLEINGNFIS 480
            NELKD+GAI I KALEGHN L EVDMS+N +RRAGARV+ QTV+HK EFKLL +NGNFIS
Sbjct: 421  NELKDEGAIQIAKALEGHNHLIEVDMSSNALRRAGARVLAQTVLHKDEFKLLNVNGNFIS 480

Query: 479  DEGIDELNEMFKKNPEMLGRL------XXXXXXXXXXXXXXXXXXXXXXXELGSKLQNLE 318
            +EG+DEL E+FKK+PEML  L                             EL SKL+NL+
Sbjct: 481  EEGVDELKEIFKKSPEMLASLEDNDPEGEDEDDEEDEEKESGDEGKDVEDELESKLKNLD 540

Query: 317  VSQE 306
            V QE
Sbjct: 541  VKQE 544