BLASTX nr result

ID: Coptis24_contig00009246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009246
         (753 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279066.1| PREDICTED: calmodulin-like [Vitis vinifera]       199   7e-49
emb|CAN67470.1| hypothetical protein VITISV_037818 [Vitis vinifera]   199   7e-49
ref|XP_002312322.1| predicted protein [Populus trichocarpa] gi|2...   179   4e-43
ref|XP_002314958.1| predicted protein [Populus trichocarpa] gi|2...   171   2e-40
ref|NP_199759.1| Ca2+-binding protein 1 [Arabidopsis thaliana] g...   169   7e-40

>ref|XP_002279066.1| PREDICTED: calmodulin-like [Vitis vinifera]
          Length = 163

 Score =  199 bits (505), Expect = 7e-49
 Identities = 106/162 (65%), Positives = 125/162 (77%), Gaps = 8/162 (4%)
 Frame = -2

Query: 698 MCPSGIVTPTTTP---DFRSAFDILDIDHDGKISRDDLKTFYSCFSGSNEVTNDED-IGS 531
           MCP+G   P  T    +FR AFD+LD D DGKISR+DL++FY+ F G   V+ DE+ IGS
Sbjct: 1   MCPTGSSLPQATAVRSEFRPAFDVLDADRDGKISREDLRSFYAGFPGG--VSGDEEAIGS 58

Query: 530 MIFIADSNKDGFVEFDEFKQVLDCSKTSPVVSG----GVMEDVFKVMDRDGDGKVSFDDL 363
           M+ +ADSNKDGFVE+DEF++VL C + SP   G    GVMEDVFKVMDRDGDGKV  +DL
Sbjct: 59  MMSVADSNKDGFVEYDEFERVLGCRR-SPRNKGHGVAGVMEDVFKVMDRDGDGKVGLEDL 117

Query: 362 KSYMNWAGFSTGDEDIKTMIKLGGGDDKSGVCYEGLLKILAV 237
           KSYMNWAGFS  +EDIK MIKLGGGD+ SGV Y+GLLKILAV
Sbjct: 118 KSYMNWAGFSATEEDIKAMIKLGGGDEDSGVSYDGLLKILAV 159


>emb|CAN67470.1| hypothetical protein VITISV_037818 [Vitis vinifera]
          Length = 163

 Score =  199 bits (505), Expect = 7e-49
 Identities = 106/162 (65%), Positives = 125/162 (77%), Gaps = 8/162 (4%)
 Frame = -2

Query: 698 MCPSGIVTPTTTP---DFRSAFDILDIDHDGKISRDDLKTFYSCFSGSNEVTNDED-IGS 531
           MCP+G   P  T    +FR AFD+LD D DGKISR+DL++FY+ F G   V+ DE+ IGS
Sbjct: 1   MCPTGSSLPQATAVRSEFRPAFDVLDADRDGKISREDLRSFYAGFPGG--VSGDEEAIGS 58

Query: 530 MIFIADSNKDGFVEFDEFKQVLDCSKTSPVVSG----GVMEDVFKVMDRDGDGKVSFDDL 363
           M+ +ADSNKDGFVE+DEF++VL C + SP   G    GVMEDVFKVMDRDGDGKV  +DL
Sbjct: 59  MMSVADSNKDGFVEYDEFERVLGCRR-SPRNKGHXVAGVMEDVFKVMDRDGDGKVGLEDL 117

Query: 362 KSYMNWAGFSTGDEDIKTMIKLGGGDDKSGVCYEGLLKILAV 237
           KSYMNWAGFS  +EDIK MIKLGGGD+ SGV Y+GLLKILAV
Sbjct: 118 KSYMNWAGFSATEEDIKAMIKLGGGDEDSGVSYDGLLKILAV 159


>ref|XP_002312322.1| predicted protein [Populus trichocarpa] gi|222852142|gb|EEE89689.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score =  179 bits (455), Expect = 4e-43
 Identities = 98/169 (57%), Positives = 116/169 (68%), Gaps = 15/169 (8%)
 Frame = -2

Query: 698 MCPSGIVTPTTTP------DFRSAFDILDIDHDGKISRDDLKTFYSCFSGSNEVTNDEDI 537
           MCP G      T       DFR AFD+LD DHDGKIS+DDL+ FY+ FS +    +D+ I
Sbjct: 1   MCPYGTSLAAGTKRGGARSDFRPAFDVLDADHDGKISKDDLRMFYAGFSSNG--ADDDFI 58

Query: 536 GSMIFIADSNKDGFVEFDEFKQVLDC------SKTSPVVSGGVMEDVFKVMDRDGDGKVS 375
           GSM+ +AD NKDGFVE+DEF++VLD       S +S   S GVMEDVFKVMD+DGDGK+S
Sbjct: 59  GSMMSVADFNKDGFVEYDEFERVLDGASEKKKSSSSTRSSSGVMEDVFKVMDKDGDGKLS 118

Query: 374 FDDLKSYMNWAGFSTGDEDIKTMIKL---GGGDDKSGVCYEGLLKILAV 237
            DDLKSYM WAGF   D+DIK MIKL    GG DK GV Y+  LKILA+
Sbjct: 119 VDDLKSYMQWAGFDASDDDIKAMIKLACYSGGGDKDGVTYDDFLKILAL 167


>ref|XP_002314958.1| predicted protein [Populus trichocarpa] gi|222863998|gb|EEF01129.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score =  171 bits (433), Expect = 2e-40
 Identities = 90/150 (60%), Positives = 111/150 (74%), Gaps = 9/150 (6%)
 Frame = -2

Query: 659 DFRSAFDILDIDHDGKISRDDLKTFYSCFSGSNEVTNDEDIGSMIFIADSNKDGFVEFDE 480
           DFR AFD+LD DHDGKIS+DDL+ FY+ FS ++   +D+ IGSM+ +AD NKDGFVE+DE
Sbjct: 20  DFRPAFDVLDADHDGKISKDDLRMFYAGFSRND--ADDDVIGSMMSVADFNKDGFVEYDE 77

Query: 479 FKQVLDCSKTSPVVS------GGVMEDVFKVMDRDGDGKVSFDDLKSYMNWAGFSTGDED 318
           F++VLD    +   S       GVMEDVFKVMD+DGDGK+S +DLKSYM WAGF   D+D
Sbjct: 78  FERVLDGFSENKETSISTRSTSGVMEDVFKVMDKDGDGKLSVEDLKSYMQWAGFDAPDDD 137

Query: 317 IKTMIKL---GGGDDKSGVCYEGLLKILAV 237
           IK MIKL    GG D+  V Y+GLLKILA+
Sbjct: 138 IKAMIKLAGCAGGGDEDVVTYDGLLKILAL 167


>ref|NP_199759.1| Ca2+-binding protein 1 [Arabidopsis thaliana]
           gi|11762204|gb|AAG40380.1|AF325028_1 AT5g49480
           [Arabidopsis thaliana]
           gi|14190413|gb|AAK55687.1|AF378884_1 AT5g49480/K6M13_2
           [Arabidopsis thaliana] gi|10177614|dbj|BAB10761.1|
           NaCl-inducible Ca2+-binding protein-like;
           calmodulin-like [Arabidopsis thaliana]
           gi|15450553|gb|AAK96454.1| AT5g49480/K6M13_2
           [Arabidopsis thaliana] gi|332008436|gb|AED95819.1|
           Ca2+-binding protein 1 [Arabidopsis thaliana]
          Length = 160

 Score =  169 bits (427), Expect = 7e-40
 Identities = 91/160 (56%), Positives = 119/160 (74%), Gaps = 9/160 (5%)
 Frame = -2

Query: 698 MCPSGIV----TPTTTPDFRSAFDILDIDHDGKISRDDLKTFYSCF-SGSNEVTNDED-I 537
           MCPSG +    T T  P+FR AF+I+D DHDGKIS DDL+ FY+   SG N   NDE  I
Sbjct: 1   MCPSGRIAIPITTTANPNFRPAFEIIDTDHDGKISSDDLRAFYAGIPSGEN---NDETMI 57

Query: 536 GSMIFIADSNKDGFVEFDEFKQVLDCSKTSPVVSGG---VMEDVFKVMDRDGDGKVSFDD 366
           G+MI +AD+NKDGFVEFDEF++VL+ +  S   +GG   +M+DVFKVMD+DGDG++S+ D
Sbjct: 58  GTMISVADANKDGFVEFDEFEKVLETTPFSRSGNGGDDGLMKDVFKVMDKDGDGRLSYGD 117

Query: 365 LKSYMNWAGFSTGDEDIKTMIKLGGGDDKSGVCYEGLLKI 246
           LKSYM+ AG +  D++IK+MI+L GGD   GV ++GLLKI
Sbjct: 118 LKSYMDSAGLAVTDDEIKSMIRLAGGDLNDGVSFDGLLKI 157


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