BLASTX nr result

ID: Coptis24_contig00009245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009245
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554802.1| PREDICTED: ion channel CASTOR [Glycine max]       171   7e-41
ref|NP_001051865.1| Os03g0843600 [Oryza sativa Japonica Group] g...   170   1e-40
gb|ABF99841.1| Ion channel DMI1-like, chloroplast precursor, put...   170   1e-40
gb|ABF99840.1| Ion channel DMI1-like, chloroplast precursor, put...   170   1e-40
sp|Q5H8A6.1|CASTO_LOTJA RecName: Full=Ion channel CASTOR gi|5843...   169   3e-40

>ref|XP_003554802.1| PREDICTED: ion channel CASTOR [Glycine max]
          Length = 846

 Score =  171 bits (432), Expect = 7e-41
 Identities = 79/90 (87%), Positives = 83/90 (92%)
 Frame = -1

Query: 272 QIWEDILGFENCEFYIKRWRQLEGMHFEDVLISFPDAIPCGVKVSSYGGKIILNPDDSYV 93
           QIWEDILGFENCEFYIKRW QLEGM FEDVLISFP AIPCG+KV+SYGGKIILNPDDSYV
Sbjct: 474 QIWEDILGFENCEFYIKRWPQLEGMQFEDVLISFPAAIPCGIKVASYGGKIILNPDDSYV 533

Query: 92  LQEGDEVLVIAEDDNTYAPMPLPMVWRGHL 3
           LQEGDE+LVIAEDD+TYAP  LP VWRG L
Sbjct: 534 LQEGDEILVIAEDDDTYAPASLPTVWRGSL 563


>ref|NP_001051865.1| Os03g0843600 [Oryza sativa Japonica Group]
           gi|62286620|sp|Q75LD5.1|CASTO_ORYSJ RecName:
           Full=Probable ion channel CASTOR; Short=OsCASTOR;
           AltName: Full=Probable ion channel DMI1-like
           gi|41469646|gb|AAS07369.1| expressed protein [Oryza
           sativa Japonica Group] gi|108712044|gb|ABF99839.1| Ion
           channel DMI1-like, chloroplast precursor, putative,
           expressed [Oryza sativa Japonica Group]
           gi|113550336|dbj|BAF13779.1| Os03g0843600 [Oryza sativa
           Japonica Group] gi|215686935|dbj|BAG90805.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 893

 Score =  170 bits (431), Expect = 1e-40
 Identities = 79/90 (87%), Positives = 84/90 (93%)
 Frame = -1

Query: 272 QIWEDILGFENCEFYIKRWRQLEGMHFEDVLISFPDAIPCGVKVSSYGGKIILNPDDSYV 93
           QIWEDILGFENCEFYIKRW QL+GM FEDVLISFPDAIPCG+KV+SYGGKIILNPDD YV
Sbjct: 520 QIWEDILGFENCEFYIKRWPQLDGMQFEDVLISFPDAIPCGIKVASYGGKIILNPDDFYV 579

Query: 92  LQEGDEVLVIAEDDNTYAPMPLPMVWRGHL 3
           LQEGDEVLVIAEDD+TYAP PLP V RG+L
Sbjct: 580 LQEGDEVLVIAEDDDTYAPAPLPKVMRGYL 609


>gb|ABF99841.1| Ion channel DMI1-like, chloroplast precursor, putative, expressed
           [Oryza sativa Japonica Group]
          Length = 741

 Score =  170 bits (431), Expect = 1e-40
 Identities = 79/90 (87%), Positives = 84/90 (93%)
 Frame = -1

Query: 272 QIWEDILGFENCEFYIKRWRQLEGMHFEDVLISFPDAIPCGVKVSSYGGKIILNPDDSYV 93
           QIWEDILGFENCEFYIKRW QL+GM FEDVLISFPDAIPCG+KV+SYGGKIILNPDD YV
Sbjct: 520 QIWEDILGFENCEFYIKRWPQLDGMQFEDVLISFPDAIPCGIKVASYGGKIILNPDDFYV 579

Query: 92  LQEGDEVLVIAEDDNTYAPMPLPMVWRGHL 3
           LQEGDEVLVIAEDD+TYAP PLP V RG+L
Sbjct: 580 LQEGDEVLVIAEDDDTYAPAPLPKVMRGYL 609


>gb|ABF99840.1| Ion channel DMI1-like, chloroplast precursor, putative, expressed
           [Oryza sativa Japonica Group]
          Length = 644

 Score =  170 bits (431), Expect = 1e-40
 Identities = 79/90 (87%), Positives = 84/90 (93%)
 Frame = -1

Query: 272 QIWEDILGFENCEFYIKRWRQLEGMHFEDVLISFPDAIPCGVKVSSYGGKIILNPDDSYV 93
           QIWEDILGFENCEFYIKRW QL+GM FEDVLISFPDAIPCG+KV+SYGGKIILNPDD YV
Sbjct: 520 QIWEDILGFENCEFYIKRWPQLDGMQFEDVLISFPDAIPCGIKVASYGGKIILNPDDFYV 579

Query: 92  LQEGDEVLVIAEDDNTYAPMPLPMVWRGHL 3
           LQEGDEVLVIAEDD+TYAP PLP V RG+L
Sbjct: 580 LQEGDEVLVIAEDDDTYAPAPLPKVMRGYL 609


>sp|Q5H8A6.1|CASTO_LOTJA RecName: Full=Ion channel CASTOR gi|58430443|dbj|BAD89019.1| ion
           channel [Lotus japonicus] gi|58430447|dbj|BAD89021.1|
           CASTOR [Lotus japonicus]
          Length = 853

 Score =  169 bits (427), Expect = 3e-40
 Identities = 80/90 (88%), Positives = 84/90 (93%)
 Frame = -1

Query: 272 QIWEDILGFENCEFYIKRWRQLEGMHFEDVLISFPDAIPCGVKVSSYGGKIILNPDDSYV 93
           QIWEDILGFENCEFYIKRW QL+GM FEDVLISFP AIPCG+KV+SYGGKIILNPDDSYV
Sbjct: 481 QIWEDILGFENCEFYIKRWPQLDGMLFEDVLISFPAAIPCGIKVASYGGKIILNPDDSYV 540

Query: 92  LQEGDEVLVIAEDDNTYAPMPLPMVWRGHL 3
           LQEGDEVLVIAEDD+TYAP PLPMV RG L
Sbjct: 541 LQEGDEVLVIAEDDDTYAPAPLPMVRRGSL 570


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