BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009237
         (1000 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283276.1| PREDICTED: ribosomal RNA large subunit methy...   330   3e-88
ref|XP_002531569.1| ftsj, putative [Ricinus communis] gi|2235287...   328   1e-87
ref|XP_002316277.1| predicted protein [Populus trichocarpa] gi|2...   320   3e-85
ref|XP_004142767.1| PREDICTED: ribosomal RNA large subunit methy...   303   6e-80
ref|XP_003616417.1| Ribosomal RNA large subunit methyltransferas...   296   4e-78

>ref|XP_002283276.1| PREDICTED: ribosomal RNA large subunit methyltransferase E [Vitis
           vinifera] gi|296086215|emb|CBI31656.3| unnamed protein
           product [Vitis vinifera]
          Length = 233

 Score =  330 bits (847), Expect = 3e-88
 Identities = 167/218 (76%), Positives = 184/218 (84%)
 Frame = +1

Query: 1   QRLGYLARSAFKLLQMQNKYQLITPGASVLDLGCAPGAWLQVACQSLGPLKKGGMVVGID 180
           QRLGY ARSAFKLLQMQ +Y+LI PG+SVLDLGCAPGAWLQVACQSLGPLK GG+VVGID
Sbjct: 15  QRLGYAARSAFKLLQMQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLKNGGVVVGID 74

Query: 181 LKKVKVPAVHCDSRVQTFCADVMDFPKDQVMALSPKGKGFSVILSDMCPLVSGITTKDAA 360
           LKKVKVP++HCDSRV+T CADVM  PKD++ A SP+ KGFSVILSDMCPLVSGITTKDA 
Sbjct: 75  LKKVKVPSMHCDSRVKTVCADVMKLPKDEIRAFSPQRKGFSVILSDMCPLVSGITTKDAV 134

Query: 361 LSIELGMRALDLAVGASDLPLPDDDIHEENQSDGSRSGADEKGILQPGGNLVIKLLESED 540
           LS ELGM+AL LAV    L    D+I +    D S SG D+ GILQPGG+LVIKLLESED
Sbjct: 135 LSAELGMQALHLAVRGPALAPSGDEIQKGEHHDDSTSGPDDDGILQPGGHLVIKLLESED 194

Query: 541 IQEFSQICKARFRKASWLRPKATRSSSREIYLICQGLQ 654
            Q FS+ICK  FRKASWLRPKATRSSSREIYLICQGL+
Sbjct: 195 AQGFSRICKPLFRKASWLRPKATRSSSREIYLICQGLR 232


>ref|XP_002531569.1| ftsj, putative [Ricinus communis] gi|223528799|gb|EEF30805.1| ftsj,
           putative [Ricinus communis]
          Length = 228

 Score =  328 bits (841), Expect = 1e-87
 Identities = 165/218 (75%), Positives = 191/218 (87%)
 Frame = +1

Query: 1   QRLGYLARSAFKLLQMQNKYQLITPGASVLDLGCAPGAWLQVACQSLGPLKKGGMVVGID 180
           QRLGY+ARSAFKLLQ+Q +++LITPG+SVLDLGCAPGAWLQVACQSLGPLK GG VVGID
Sbjct: 15  QRLGYVARSAFKLLQIQKQHKLITPGSSVLDLGCAPGAWLQVACQSLGPLKNGGSVVGID 74

Query: 181 LKKVKVPAVHCDSRVQTFCADVMDFPKDQVMALSPKGKGFSVILSDMCPLVSGITTKDAA 360
           LKKVKVP  +CD+RV+T CADVM+ P+DQV ALS + KGFSV+LSDMCP VSGITTKDAA
Sbjct: 75  LKKVKVPNPYCDARVKTVCADVMNLPRDQVRALSLQQKGFSVVLSDMCPPVSGITTKDAA 134

Query: 361 LSIELGMRALDLAVGASDLPLPDDDIHEENQSDGSRSGADEKGILQPGGNLVIKLLESED 540
           LS+ELGM+ALD+A+G +    PDD    ENQ+D S SG ++ G+LQ GG+LVIKLLESED
Sbjct: 135 LSMELGMQALDIAIGGAASAHPDD----ENQNDDSTSGENDNGVLQAGGHLVIKLLESED 190

Query: 541 IQEFSQICKARFRKASWLRPKATRSSSREIYLICQGLQ 654
           IQEF++ICK  FRKASWLRPKATRSSSREIYLICQGL+
Sbjct: 191 IQEFTRICKPLFRKASWLRPKATRSSSREIYLICQGLK 228


>ref|XP_002316277.1| predicted protein [Populus trichocarpa] gi|222865317|gb|EEF02448.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score =  320 bits (821), Expect = 3e-85
 Identities = 167/218 (76%), Positives = 187/218 (85%), Gaps = 1/218 (0%)
 Frame = +1

Query: 1   QRLGYLARSAFKLLQMQNKYQLITPGASVLDLGCAPGAWLQVACQSLGPLKKGGMVVGID 180
           QRLGY+ARSAFKLLQ+Q K++LI PG+SVLDLGCAPGAWLQVACQSLGPLK GG VVGID
Sbjct: 15  QRLGYVARSAFKLLQIQKKHKLIAPGSSVLDLGCAPGAWLQVACQSLGPLKNGGAVVGID 74

Query: 181 LKKVKVPAVHCDSRVQTFCADVMDFPKDQVMALSPKGKGFSVILSDMCPLVSGITTKDAA 360
           LKKVKVP ++CDSRVQT CADVM  PK+QV ALSP+ KGFSV+LSDMCPLVSGITT+DAA
Sbjct: 75  LKKVKVPPLYCDSRVQTVCADVMKLPKNQVRALSPRQKGFSVVLSDMCPLVSGITTRDAA 134

Query: 361 LSIELGMRALDLAVG-ASDLPLPDDDIHEENQSDGSRSGADEKGILQPGGNLVIKLLESE 537
           LS ELGM+AL LAVG A+   L  D+I  +   + S   AD+ GILQPGG+LVIKLLESE
Sbjct: 135 LSAELGMQALGLAVGRAATAHL--DEIRTDRLLNDSVCTADDNGILQPGGHLVIKLLESE 192

Query: 538 DIQEFSQICKARFRKASWLRPKATRSSSREIYLICQGL 651
           D +EFS+ICK  FRKASWLRPKATRSSSREIYLICQGL
Sbjct: 193 DNKEFSRICKPLFRKASWLRPKATRSSSREIYLICQGL 230


>ref|XP_004142767.1| PREDICTED: ribosomal RNA large subunit methyltransferase E-like
           [Cucumis sativus] gi|449528435|ref|XP_004171210.1|
           PREDICTED: ribosomal RNA large subunit methyltransferase
           E-like [Cucumis sativus]
          Length = 238

 Score =  303 bits (775), Expect = 6e-80
 Identities = 155/219 (70%), Positives = 187/219 (85%), Gaps = 2/219 (0%)
 Frame = +1

Query: 1   QRLGYLARSAFKLLQMQNKYQLITPGASVLDLGCAPGAWLQVACQSLGPLKKGGMVVGID 180
           QRLGY+ARSAFKLLQ+QN+++LIT G+SVLDLGCAPGAWLQVACQSLGP + GG V+GID
Sbjct: 15  QRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQSLGPPRNGGSVLGID 74

Query: 181 LKKVKVPAVHCDSRVQTFCADVMDFPKDQVMALSPKGKGFSVILSDMCPLVSGITTKDAA 360
           +KKVKVP +HCDSRVQT  ADVM+ PK ++ +LSPK KGFSVILSDMCPLVSGITT+DAA
Sbjct: 75  IKKVKVPHMHCDSRVQTVSADVMNLPKSKLKSLSPKEKGFSVILSDMCPLVSGITTRDAA 134

Query: 361 LSIELGMRALDLAVGASDLPLPDDDIH--EENQSDGSRSGADEKGILQPGGNLVIKLLES 534
           LS+ELGM+A++LA+G + L +  D IH  +++  D S S +D  G+L+ GG+LV+KLLES
Sbjct: 135 LSVELGMQAVNLALGEAALGV-GDVIHGKDKDSVDDSTSASDCDGVLRQGGHLVLKLLES 193

Query: 535 EDIQEFSQICKARFRKASWLRPKATRSSSREIYLICQGL 651
           ED QEFS++ K  FRKASWLRPKATRSSSREIYLICQ L
Sbjct: 194 EDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSL 232


>ref|XP_003616417.1| Ribosomal RNA large subunit methyltransferase E [Medicago
           truncatula] gi|355517752|gb|AES99375.1| Ribosomal RNA
           large subunit methyltransferase E [Medicago truncatula]
          Length = 238

 Score =  296 bits (759), Expect = 4e-78
 Identities = 153/219 (69%), Positives = 177/219 (80%), Gaps = 1/219 (0%)
 Frame = +1

Query: 1   QRLGYLARSAFKLLQMQNKYQLITPGASVLDLGCAPGAWLQVACQSLGPLKKGGMVVGID 180
           QRLGY+ARSAFKL+Q+Q +++LI PG+SVLDLGCAPG+WLQVACQSLGP   GG V+GID
Sbjct: 15  QRLGYVARSAFKLVQIQKQHKLIKPGSSVLDLGCAPGSWLQVACQSLGPFHNGGSVLGID 74

Query: 181 LKKVKVPAVHCDSRVQTFCADVMDFPKDQVMALSPKGKGFSVILSDMCPLVSGITTKDAA 360
            KKVKVP  HCDSRV+T  ADVM  PK Q+  LSPK KGFSVILSDMCPLVSGITTKDAA
Sbjct: 75  HKKVKVPTSHCDSRVKTVAADVMTLPKQQLRDLSPKQKGFSVILSDMCPLVSGITTKDAA 134

Query: 361 LSIELGMRALDLAVG-ASDLPLPDDDIHEENQSDGSRSGADEKGILQPGGNLVIKLLESE 537
           LS ELGMRALDLAVG  + +   D D  +E +     SGAD+ G+L+ GG+LV+KLLESE
Sbjct: 135 LSFELGMRALDLAVGKVASVCNSDGDNLDEVKERCDPSGADDGGLLRVGGHLVVKLLESE 194

Query: 538 DIQEFSQICKARFRKASWLRPKATRSSSREIYLICQGLQ 654
           D +E +QICK  F K+ WLRPKATR SSREIYLICQGL+
Sbjct: 195 DAKEINQICKPLFTKSVWLRPKATRPSSREIYLICQGLK 233