BLASTX nr result

ID: Coptis24_contig00009236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009236
         (1130 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539843.1| PREDICTED: uncharacterized protein LOC100811...   184   3e-44
gb|AFK44561.1| unknown [Lotus japonicus]                              183   6e-44
gb|AFK49464.1| unknown [Medicago truncatula]                          180   5e-43
ref|XP_003606096.1| Transmembrane protein C20orf108 [Medicago tr...   180   5e-43
ref|XP_004140165.1| PREDICTED: protein FAM210B-like [Cucumis sat...   177   3e-42

>ref|XP_003539843.1| PREDICTED: uncharacterized protein LOC100811827 [Glycine max]
          Length = 191

 Score =  184 bits (468), Expect = 3e-44
 Identities = 92/123 (74%), Positives = 100/123 (81%)
 Frame = +1

Query: 292 FGLEAGLWKIFSSKEEGKDGNGEKSKGDQAKELLAKYGGAYXXXXXXXXXXXXXXCYILI 471
           +GLEAGLW+IFSSKEEGKD + +KSKGDQAKELLAKYGGAY              CY LI
Sbjct: 68  YGLEAGLWQIFSSKEEGKDNSQQKSKGDQAKELLAKYGGAYLATSITLSLISFALCYALI 127

Query: 472 SVGVDVQALLHKVGISASETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVAGWIGKKN 651
           S G+DVQALL KVGIS   TGEKVGTFALAYAAHKAASPIRFPPTVALTPIVAGWIGKK 
Sbjct: 128 SAGIDVQALLQKVGISTDATGEKVGTFALAYAAHKAASPIRFPPTVALTPIVAGWIGKKV 187

Query: 652 QEE 660
           +++
Sbjct: 188 EKD 190


>gb|AFK44561.1| unknown [Lotus japonicus]
          Length = 192

 Score =  183 bits (465), Expect = 6e-44
 Identities = 101/168 (60%), Positives = 112/168 (66%), Gaps = 3/168 (1%)
 Frame = +1

Query: 166 ASLPYYKSSKPNLKSFKVRALXXXXXXXXXXXXXXXXXXXXX---FGLEAGLWKIFSSKE 336
           ++L    S KP +K F+VRAL                        +GLEAGLWKIFSSKE
Sbjct: 24  SNLASIHSHKPLVKGFRVRALREKTEEIKSPSSQTSSSAEEVTKKYGLEAGLWKIFSSKE 83

Query: 337 EGKDGNGEKSKGDQAKELLAKYGGAYXXXXXXXXXXXXXXCYILISVGVDVQALLHKVGI 516
           E    +GEKSKGDQAKELLAKYGGAY              CY LI+ GVDVQ+LL KVGI
Sbjct: 84  EENGNSGEKSKGDQAKELLAKYGGAYLATSITLSLISFTLCYALINAGVDVQSLLQKVGI 143

Query: 517 SASETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVAGWIGKKNQEE 660
           S +E GEKVGTFALAYAAHKAASPIRFPPTVALTPIVA WIGKK ++E
Sbjct: 144 SPNEAGEKVGTFALAYAAHKAASPIRFPPTVALTPIVANWIGKKVEKE 191


>gb|AFK49464.1| unknown [Medicago truncatula]
          Length = 188

 Score =  180 bits (457), Expect = 5e-43
 Identities = 101/173 (58%), Positives = 112/173 (64%), Gaps = 1/173 (0%)
 Frame = +1

Query: 145 NSPFSKHASLPYYKSSKPNLKSFKVRALXXXXXXXXXXXXXXXXXXXXX-FGLEAGLWKI 321
           N   S+  SL   +S K N+K  +VRA+                      +GLEAGLWKI
Sbjct: 18  NKKSSRFCSLASIQSRKSNVKVLRVRAVKEKTEEIKSSSKQSSPEEVTKKYGLEAGLWKI 77

Query: 322 FSSKEEGKDGNGEKSKGDQAKELLAKYGGAYXXXXXXXXXXXXXXCYILISVGVDVQALL 501
           FSSKEEG     +KSKGDQAKELLAKYGGAY              CY+LI+ GVDVQ LL
Sbjct: 78  FSSKEEGDQ---QKSKGDQAKELLAKYGGAYLATSITLSLISFAFCYVLINAGVDVQTLL 134

Query: 502 HKVGISASETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVAGWIGKKNQEE 660
            KVGIS   TGEKVGTFALAYAAHKAASPIRFPPTVALTPIVAGWIGKK  ++
Sbjct: 135 QKVGISTDATGEKVGTFALAYAAHKAASPIRFPPTVALTPIVAGWIGKKADKD 187


>ref|XP_003606096.1| Transmembrane protein C20orf108 [Medicago truncatula]
           gi|355507151|gb|AES88293.1| Transmembrane protein
           C20orf108 [Medicago truncatula]
          Length = 188

 Score =  180 bits (457), Expect = 5e-43
 Identities = 101/173 (58%), Positives = 112/173 (64%), Gaps = 1/173 (0%)
 Frame = +1

Query: 145 NSPFSKHASLPYYKSSKPNLKSFKVRALXXXXXXXXXXXXXXXXXXXXX-FGLEAGLWKI 321
           N   S+  SL   +S K N+K  +VRA+                      +GLEAGLWKI
Sbjct: 18  NKKSSRFCSLASIQSRKSNVKVLRVRAVKEKTEEIKSSSKQSSPEEVTKKYGLEAGLWKI 77

Query: 322 FSSKEEGKDGNGEKSKGDQAKELLAKYGGAYXXXXXXXXXXXXXXCYILISVGVDVQALL 501
           FSSKEEG     +KSKGDQAKELLAKYGGAY              CY+LI+ GVDVQ LL
Sbjct: 78  FSSKEEGDQ---QKSKGDQAKELLAKYGGAYLATSITLSLISFALCYVLINAGVDVQTLL 134

Query: 502 HKVGISASETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVAGWIGKKNQEE 660
            KVGIS   TGEKVGTFALAYAAHKAASPIRFPPTVALTPIVAGWIGKK  ++
Sbjct: 135 QKVGISTDATGEKVGTFALAYAAHKAASPIRFPPTVALTPIVAGWIGKKADKD 187


>ref|XP_004140165.1| PREDICTED: protein FAM210B-like [Cucumis sativus]
           gi|449519846|ref|XP_004166945.1| PREDICTED: protein
           FAM210B-like [Cucumis sativus]
          Length = 192

 Score =  177 bits (450), Expect = 3e-42
 Identities = 93/123 (75%), Positives = 97/123 (78%)
 Frame = +1

Query: 292 FGLEAGLWKIFSSKEEGKDGNGEKSKGDQAKELLAKYGGAYXXXXXXXXXXXXXXCYILI 471
           +GLEAGLWKIFSSKEEG+  N  KSKGDQAKELLAKYGGAY              CY LI
Sbjct: 71  YGLEAGLWKIFSSKEEGEGTN--KSKGDQAKELLAKYGGAYLATSITLSLISFSLCYALI 128

Query: 472 SVGVDVQALLHKVGISASETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVAGWIGKKN 651
           S GVDVQ LL KVGIS  ETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVA WIGKK 
Sbjct: 129 SAGVDVQVLLQKVGISIDETGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKV 188

Query: 652 QEE 660
           ++E
Sbjct: 189 EKE 191


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