BLASTX nr result
ID: Coptis24_contig00009228
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00009228 (859 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004144722.1| PREDICTED: zinc finger CCCH domain-containin... 76 1e-11 emb|CBI16011.3| unnamed protein product [Vitis vinifera] 76 1e-11 ref|XP_002280897.1| PREDICTED: zinc finger CCCH domain-containin... 76 1e-11 ref|XP_002314129.1| predicted protein [Populus trichocarpa] gi|2... 74 3e-11 ref|XP_002314127.1| predicted protein [Populus trichocarpa] gi|2... 74 3e-11 >ref|XP_004144722.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like [Cucumis sativus] gi|449525922|ref|XP_004169965.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like [Cucumis sativus] Length = 517 Score = 75.9 bits (185), Expect = 1e-11 Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 1/91 (1%) Frame = -3 Query: 650 ICRSCFGPNMQARLKKGNWDRDCMICKQPFCVVKWLAVCGC-IGETELCHTCSELENVCE 474 IC SC G N R+ K ++D++C IC +PF V +W +TE+C TCS+L+NVC+ Sbjct: 22 ICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGRDARYKKTEICQTCSKLKNVCQ 81 Query: 473 VCGQVCQKNEHGFLPVRLNETAADIRANIAI 381 VC E+G LPV++ +TA I +N AI Sbjct: 82 VC---LLDLEYG-LPVQVRDTALSINSNDAI 108 >emb|CBI16011.3| unnamed protein product [Vitis vinifera] Length = 349 Score = 75.9 bits (185), Expect = 1e-11 Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 1/91 (1%) Frame = -3 Query: 650 ICRSCFGPNMQARLKKGNWDRDCMICKQPFCVVKWLAVCGC-IGETELCHTCSELENVCE 474 IC SC G N R+ K ++D++C IC +PF V +W +TE+C TCS+L+NVC+ Sbjct: 22 ICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGRDARFKKTEVCQTCSKLKNVCQ 81 Query: 473 VCGQVCQKNEHGFLPVRLNETAADIRANIAI 381 VC E+G LPV++ +TA I +N AI Sbjct: 82 VC---LLDLEYG-LPVQVRDTALSINSNDAI 108 >ref|XP_002280897.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like [Vitis vinifera] Length = 474 Score = 75.9 bits (185), Expect = 1e-11 Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 1/91 (1%) Frame = -3 Query: 650 ICRSCFGPNMQARLKKGNWDRDCMICKQPFCVVKWLAVCGC-IGETELCHTCSELENVCE 474 IC SC G N R+ K ++D++C IC +PF V +W +TE+C TCS+L+NVC+ Sbjct: 22 ICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGRDARFKKTEVCQTCSKLKNVCQ 81 Query: 473 VCGQVCQKNEHGFLPVRLNETAADIRANIAI 381 VC E+G LPV++ +TA I +N AI Sbjct: 82 VC---LLDLEYG-LPVQVRDTALSINSNDAI 108 >ref|XP_002314129.1| predicted protein [Populus trichocarpa] gi|222850537|gb|EEE88084.1| predicted protein [Populus trichocarpa] Length = 531 Score = 74.3 bits (181), Expect = 3e-11 Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 1/91 (1%) Frame = -3 Query: 650 ICRSCFGPNMQARLKKGNWDRDCMICKQPFCVVKWLAVCGC-IGETELCHTCSELENVCE 474 IC SC G N R+ + ++D++C IC +PF V +W +TE+C TCS+L+NVC+ Sbjct: 22 ICESCLGDNPYVRMTRADFDKECKICTRPFTVFRWRPGRDARFKKTEVCQTCSKLKNVCQ 81 Query: 473 VCGQVCQKNEHGFLPVRLNETAADIRANIAI 381 VC E+G LPV++ +TA I +N AI Sbjct: 82 VC---LLDLEYG-LPVQVRDTALSINSNDAI 108 >ref|XP_002314127.1| predicted protein [Populus trichocarpa] gi|222850535|gb|EEE88082.1| predicted protein [Populus trichocarpa] Length = 531 Score = 74.3 bits (181), Expect = 3e-11 Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 1/91 (1%) Frame = -3 Query: 650 ICRSCFGPNMQARLKKGNWDRDCMICKQPFCVVKWLAVCGC-IGETELCHTCSELENVCE 474 IC SC G N R+ + ++D++C IC +PF V +W +TE+C TCS+L+NVC+ Sbjct: 22 ICESCLGDNPYVRMTRADFDKECKICTRPFTVFRWRPGRDARFKKTEVCQTCSKLKNVCQ 81 Query: 473 VCGQVCQKNEHGFLPVRLNETAADIRANIAI 381 VC E+G LPV++ +TA I +N AI Sbjct: 82 VC---LLDLEYG-LPVQVRDTALSINSNDAI 108