BLASTX nr result

ID: Coptis24_contig00009226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009226
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269044.2| PREDICTED: putative disease resistance prote...   145   7e-33
ref|XP_003632834.1| PREDICTED: putative disease resistance prote...   144   1e-32
emb|CAN71072.1| hypothetical protein VITISV_000086 [Vitis vinifera]   143   3e-32
ref|XP_002328584.1| nbs-lrr resistance protein [Populus trichoca...   141   8e-32
ref|XP_002268671.2| PREDICTED: putative disease resistance prote...   141   1e-31

>ref|XP_002269044.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
            vinifera]
          Length = 919

 Score =  145 bits (365), Expect = 7e-33
 Identities = 93/191 (48%), Positives = 124/191 (64%), Gaps = 3/191 (1%)
 Frame = +3

Query: 6    LRTLVGKAS--KSVPSALHQLTCLRTLDLSRDTWSPALEVLPSVPLKVNRLLHLRYLDLS 179
            L TL+ K++    V  AL  LTCLR LDLS   W+  +E LP    +V +L+HLRYLDLS
Sbjct: 555  LHTLLAKSAFDSRVLEALGHLTCLRALDLS---WNQLIEELPK---EVGKLIHLRYLDLS 608

Query: 180  KAR-LKKLPETMRSLVNLQTLKLNSCPNLCKLPEGIGELSNLRHLEVEDTWSLKYYPRGG 356
            + + L++LPET+  L NLQTL +  C +L KLP+ +G+L NLRHLE   T SLK  P+G 
Sbjct: 609  RCQSLRELPETICDLYNLQTLNIQYCISLQKLPQAMGKLINLRHLE-NYTRSLKGLPKG- 666

Query: 357  IERLSQLRTLSKFVVSDGSSKGSVIGELGNLNFLKGRLVIEGLRHVKSVNEAKEAELQKK 536
            I RLS L+TL  F+VS   +    IG+L NLN L+G L I+GL  VK   EA++AEL+ +
Sbjct: 667  IGRLSSLQTLDVFIVSSHGNDECQIGDLRNLNNLRGGLSIQGLDEVKDAGEAEKAELKNR 726

Query: 537  RNISELGLDFG 569
             ++  L L FG
Sbjct: 727  VSLHRLALVFG 737


>ref|XP_003632834.1| PREDICTED: putative disease resistance protein RGA4-like [Vitis
            vinifera]
          Length = 904

 Score =  144 bits (363), Expect = 1e-32
 Identities = 91/193 (47%), Positives = 120/193 (62%), Gaps = 3/193 (1%)
 Frame = +3

Query: 6    LRTLVGKAS--KSVPSALHQLTCLRTLDLSRDTWSPALEVLPSVPLKVNRLLHLRYLDLS 179
            L TL+ K +    V  AL  LTCLR LDLS + W      +  +P +V +L+HLRYL+LS
Sbjct: 536  LHTLLAKEAFDSRVLEALGNLTCLRALDLSSNDW------IEELPKEVGKLIHLRYLNLS 589

Query: 180  KAR-LKKLPETMRSLVNLQTLKLNSCPNLCKLPEGIGELSNLRHLEVEDTWSLKYYPRGG 356
                L++LPET+  L NLQTL +  C +L KLP  +G+L NLRHLE   T SLK  P+G 
Sbjct: 590  WCESLRELPETICDLYNLQTLNIEGCSSLQKLPHAMGKLINLRHLE-NYTRSLKGLPKG- 647

Query: 357  IERLSQLRTLSKFVVSDGSSKGSVIGELGNLNFLKGRLVIEGLRHVKSVNEAKEAELQKK 536
            I RLS L+TL  F+VS   +    IG+L NLN L+GRL +EGL  VK   E ++AEL+ +
Sbjct: 648  IGRLSSLQTLDVFIVSSHGNDECQIGDLRNLNNLRGRLSVEGLDEVKDAGEPEKAELKNR 707

Query: 537  RNISELGLDFGYK 575
             +   L L+FG K
Sbjct: 708  VHFQYLTLEFGEK 720


>emb|CAN71072.1| hypothetical protein VITISV_000086 [Vitis vinifera]
          Length = 927

 Score =  143 bits (360), Expect = 3e-32
 Identities = 85/182 (46%), Positives = 119/182 (65%), Gaps = 1/182 (0%)
 Frame = +3

Query: 33   KSVPSALHQLTCLRTLDLSRDTWSPALEVLPSVPLKVNRLLHLRYLDLSKA-RLKKLPET 209
            +++ + L  LTCLR LDLSR+       ++  +P +V +L+HLRYL+LS   RL++LPET
Sbjct: 571  EALXNLLRHLTCLRALDLSRN------RLIEELPKEVGKLIHLRYLNLSLCYRLRELPET 624

Query: 210  MRSLVNLQTLKLNSCPNLCKLPEGIGELSNLRHLEVEDTWSLKYYPRGGIERLSQLRTLS 389
            +  L NLQTL +  C +L KLP+ +G+L NLRHLE  +T SLK  P+ GI RLS L+TL 
Sbjct: 625  ICDLYNLQTLNIEGCSSLQKLPQAMGKLINLRHLENCNTGSLKGLPK-GIGRLSSLQTLD 683

Query: 390  KFVVSDGSSKGSVIGELGNLNFLKGRLVIEGLRHVKSVNEAKEAELQKKRNISELGLDFG 569
             F+VS   +    IG+L NLN L+G L I+ L  VK   EA++AEL+ + +   L L+FG
Sbjct: 684  VFIVSSHGNDECQIGDLRNLNNLRGGLSIQRLDEVKDAGEAEKAELKNRVHFQYLTLEFG 743

Query: 570  YK 575
             K
Sbjct: 744  KK 745


>ref|XP_002328584.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222838566|gb|EEE76931.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 906

 Score =  141 bits (356), Expect = 8e-32
 Identities = 84/197 (42%), Positives = 116/197 (58%)
 Frame = +3

Query: 6    LRTLVGKASKSVPSALHQLTCLRTLDLSRDTWSPALEVLPSVPLKVNRLLHLRYLDLSKA 185
            L+ L      + P   H L CLR LDLS  +       +  +P  V RL HLR+L+LS  
Sbjct: 556  LQVLQKDVKTAPPDLFHGLQCLRGLDLSHTS-------ITGLPSAVGRLFHLRWLNLSGL 608

Query: 186  RLKKLPETMRSLVNLQTLKLNSCPNLCKLPEGIGELSNLRHLEVEDTWSLKYYPRGGIER 365
                LP+T+  L NL  LKL+ C  L +LP G+G+L NLR+L +E+T SL   P+ GI R
Sbjct: 609  NFVVLPDTICKLYNLLALKLHGCRRLHRLPRGLGKLINLRYLNIEETESLSVLPQ-GIGR 667

Query: 366  LSQLRTLSKFVVSDGSSKGSVIGELGNLNFLKGRLVIEGLRHVKSVNEAKEAELQKKRNI 545
            LS LRTLSKF + + + +G  +GEL NLN L+G L I GL  V++VNE  EA L+ K ++
Sbjct: 668  LSNLRTLSKFCIGE-NREGCNVGELKNLNHLRGHLEISGLEKVRNVNEVMEANLKNKEHL 726

Query: 546  SELGLDFGYKYNEHVSS 596
              L L F +   E +++
Sbjct: 727  RSLDLAFSFGGQELITN 743


>ref|XP_002268671.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
            vinifera]
          Length = 923

 Score =  141 bits (355), Expect = 1e-31
 Identities = 87/191 (45%), Positives = 120/191 (62%), Gaps = 3/191 (1%)
 Frame = +3

Query: 6    LRTLVGKAS--KSVPSALHQLTCLRTLDLSRDTWSPALEVLPSVPLKVNRLLHLRYLDLS 179
            L TL+ K +    V  AL  LTCLR LDL  +      +++  +P +V +L+HLRYL+LS
Sbjct: 556  LHTLLAKRAFDSRVLEALGHLTCLRALDLRSN------QLIEELPKEVGKLIHLRYLNLS 609

Query: 180  KA-RLKKLPETMRSLVNLQTLKLNSCPNLCKLPEGIGELSNLRHLEVEDTWSLKYYPRGG 356
                L++LPET+  L NLQTL + +C  L KLP+ +G+L NLRHLE  D   L+  P+G 
Sbjct: 610  YCDSLRELPETICDLYNLQTLNIQACSRLQKLPQAMGKLINLRHLENYDADDLQGLPKG- 668

Query: 357  IERLSQLRTLSKFVVSDGSSKGSVIGELGNLNFLKGRLVIEGLRHVKSVNEAKEAELQKK 536
            I RLS L+TL  F+VS   +    I +L NLN L+GRL I+GL  VK   EA++AELQ +
Sbjct: 669  IGRLSSLQTLDVFIVSSHGNDECQIEDLRNLNNLRGRLSIQGLDEVKDAGEAEKAELQNR 728

Query: 537  RNISELGLDFG 569
             ++  L L+FG
Sbjct: 729  VHLQRLTLEFG 739


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