BLASTX nr result

ID: Coptis24_contig00009218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009218
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268230.1| PREDICTED: uncharacterized protein LOC100255...   185   4e-45
ref|XP_002533604.1| conserved hypothetical protein [Ricinus comm...   171   1e-40
ref|XP_002328173.1| predicted protein [Populus trichocarpa] gi|2...   165   5e-39
ref|XP_002312897.1| predicted protein [Populus trichocarpa] gi|2...   162   5e-38
emb|CAN62312.1| hypothetical protein VITISV_018204 [Vitis vinifera]   161   9e-38

>ref|XP_002268230.1| PREDICTED: uncharacterized protein LOC100255180 [Vitis vinifera]
          Length = 299

 Score =  185 bits (470), Expect = 4e-45
 Identities = 92/160 (57%), Positives = 115/160 (71%)
 Frame = -1

Query: 483 MRDIASCFSEYSVTVSDASCSSASNLVCRRPGQAFRHPNLIPSIQNAVTCIYKANLSTQK 304
           MRDIASCF EYSV VSD+SCSS SN  C  P       +LIPSIQNAVT +YK NLST+K
Sbjct: 1   MRDIASCFGEYSVNVSDSSCSSYSNNACLSP-------SLIPSIQNAVTSVYKINLSTKK 53

Query: 303 QILISVTWCRNHIGQGLSIKVGDELSSTIKVNMDYRLFRRKKGNRTFESGNSTVEVLWDL 124
           ++LISVTWC+N +GQGLSI +GD+ S+  K+N + RLFR+KKGN+  ES N  +EV WDL
Sbjct: 54  KLLISVTWCKNQLGQGLSINLGDDPSAAFKLNTNSRLFRKKKGNKLLESDNLKIEVFWDL 113

Query: 123 SMARYDLGPEPTDGFYVAVMVDAXXXXXXXXXXXXLATKK 4
           S+A+Y+ GPEP +GFYV V+VD+             AT+K
Sbjct: 114 SIAKYNTGPEPVEGFYVLVVVDSEIGLLLGDIAEEAATRK 153


>ref|XP_002533604.1| conserved hypothetical protein [Ricinus communis]
           gi|223526505|gb|EEF28773.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 299

 Score =  171 bits (432), Expect = 1e-40
 Identities = 84/143 (58%), Positives = 104/143 (72%)
 Frame = -1

Query: 483 MRDIASCFSEYSVTVSDASCSSASNLVCRRPGQAFRHPNLIPSIQNAVTCIYKANLSTQK 304
           MRDI SCFSE ++ +S  SCSS SN VC  P       +LIPSIQNAVTC+YK  LSTQK
Sbjct: 1   MRDIVSCFSENAINISHPSCSSYSNNVCISP-------SLIPSIQNAVTCLYKIILSTQK 53

Query: 303 QILISVTWCRNHIGQGLSIKVGDELSSTIKVNMDYRLFRRKKGNRTFESGNSTVEVLWDL 124
           Q+L +VTWC+N+  QGL+I  G + S++ K+N   RLFR+K+G++  ES NS +EV WDL
Sbjct: 54  QLLATVTWCKNNTTQGLNINFGTDPSTSFKLNTSTRLFRKKRGSKVIESDNSKIEVFWDL 113

Query: 123 SMARYDLGPEPTDGFYVAVMVDA 55
           S ARYD GP P DGFYV VMVD+
Sbjct: 114 SSARYDTGPAPVDGFYVLVMVDS 136


>ref|XP_002328173.1| predicted protein [Populus trichocarpa] gi|222837688|gb|EEE76053.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score =  165 bits (418), Expect = 5e-39
 Identities = 83/161 (51%), Positives = 107/161 (66%)
 Frame = -1

Query: 483 MRDIASCFSEYSVTVSDASCSSASNLVCRRPGQAFRHPNLIPSIQNAVTCIYKANLSTQK 304
           MRDI SCFSE ++ VS +SCSS SN  C  P       +L PS+QNAV+C YK  LST+K
Sbjct: 1   MRDIVSCFSENAIQVSHSSCSSYSNNACISP-------SLTPSVQNAVSCFYKIILSTKK 53

Query: 303 QILISVTWCRNHIGQGLSIKVGDELSSTIKVNMDYRLFRRKKGNRTFESGNSTVEVLWDL 124
           Q+L  V+WC+NH  QGLSIK G++ S++ K++ + RLFR+ KGN+  ES    +EV WDL
Sbjct: 54  QLLAKVSWCKNHTTQGLSIKFGNDPSTSFKLSTNTRLFRKMKGNKLIESDTVKIEVFWDL 113

Query: 123 SMARYDLGPEPTDGFYVAVMVDAXXXXXXXXXXXXLATKKF 1
           S A+Y+LGPEP +GFYV VMVD+              TKKF
Sbjct: 114 SSAKYELGPEPVEGFYVLVMVDSEIGLILGDVGEETLTKKF 154


>ref|XP_002312897.1| predicted protein [Populus trichocarpa] gi|222849305|gb|EEE86852.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score =  162 bits (409), Expect = 5e-38
 Identities = 82/161 (50%), Positives = 105/161 (65%)
 Frame = -1

Query: 483 MRDIASCFSEYSVTVSDASCSSASNLVCRRPGQAFRHPNLIPSIQNAVTCIYKANLSTQK 304
           MRDI SCFSE ++ VS +SCSS S+  C  PG       L PS+QNAV+C YK  LST+K
Sbjct: 1   MRDIVSCFSENAIDVSHSSCSSFSHNACISPG-------LTPSVQNAVSCFYKIILSTRK 53

Query: 303 QILISVTWCRNHIGQGLSIKVGDELSSTIKVNMDYRLFRRKKGNRTFESGNSTVEVLWDL 124
           Q+L +V+W +NH  QGLSIK G++ S++ K+    R FR+ KGN+  ES  S +EV WDL
Sbjct: 54  QLLATVSWSKNHTNQGLSIKFGNDPSTSFKLGTHTRFFRKLKGNKLIESDTSKIEVFWDL 113

Query: 123 SMARYDLGPEPTDGFYVAVMVDAXXXXXXXXXXXXLATKKF 1
           S A+Y+LGPEP +GFYV VMVD+              TKKF
Sbjct: 114 SSAKYELGPEPVEGFYVLVMVDSEIGLILGDVGEETLTKKF 154


>emb|CAN62312.1| hypothetical protein VITISV_018204 [Vitis vinifera]
          Length = 753

 Score =  161 bits (407), Expect = 9e-38
 Identities = 79/145 (54%), Positives = 101/145 (69%)
 Frame = -1

Query: 489 STMRDIASCFSEYSVTVSDASCSSASNLVCRRPGQAFRHPNLIPSIQNAVTCIYKANLST 310
           S MR IASC+SE+++ VSD+ CS  SN  C  P       +LIPSIQ AVTCIYKA LS 
Sbjct: 344 SKMRTIASCYSEHAIKVSDSYCSGPSNQACLSP-------SLIPSIQKAVTCIYKARLSN 396

Query: 309 QKQILISVTWCRNHIGQGLSIKVGDELSSTIKVNMDYRLFRRKKGNRTFESGNSTVEVLW 130
           QKQ+LI++ WC N +GQG SIK+ ++LSS+ + N     FR  +G RTFE  +S +EV W
Sbjct: 397 QKQLLITLNWCNNLVGQGFSIKISNDLSSSFESNAVSHQFRNNRGTRTFELCDSRIEVFW 456

Query: 129 DLSMARYDLGPEPTDGFYVAVMVDA 55
           DLS A+YD GPEP +GFYV V+ D+
Sbjct: 457 DLSRAQYDSGPEPINGFYVIVLADS 481


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