BLASTX nr result
ID: Coptis24_contig00009218
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00009218 (591 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002268230.1| PREDICTED: uncharacterized protein LOC100255... 185 4e-45 ref|XP_002533604.1| conserved hypothetical protein [Ricinus comm... 171 1e-40 ref|XP_002328173.1| predicted protein [Populus trichocarpa] gi|2... 165 5e-39 ref|XP_002312897.1| predicted protein [Populus trichocarpa] gi|2... 162 5e-38 emb|CAN62312.1| hypothetical protein VITISV_018204 [Vitis vinifera] 161 9e-38 >ref|XP_002268230.1| PREDICTED: uncharacterized protein LOC100255180 [Vitis vinifera] Length = 299 Score = 185 bits (470), Expect = 4e-45 Identities = 92/160 (57%), Positives = 115/160 (71%) Frame = -1 Query: 483 MRDIASCFSEYSVTVSDASCSSASNLVCRRPGQAFRHPNLIPSIQNAVTCIYKANLSTQK 304 MRDIASCF EYSV VSD+SCSS SN C P +LIPSIQNAVT +YK NLST+K Sbjct: 1 MRDIASCFGEYSVNVSDSSCSSYSNNACLSP-------SLIPSIQNAVTSVYKINLSTKK 53 Query: 303 QILISVTWCRNHIGQGLSIKVGDELSSTIKVNMDYRLFRRKKGNRTFESGNSTVEVLWDL 124 ++LISVTWC+N +GQGLSI +GD+ S+ K+N + RLFR+KKGN+ ES N +EV WDL Sbjct: 54 KLLISVTWCKNQLGQGLSINLGDDPSAAFKLNTNSRLFRKKKGNKLLESDNLKIEVFWDL 113 Query: 123 SMARYDLGPEPTDGFYVAVMVDAXXXXXXXXXXXXLATKK 4 S+A+Y+ GPEP +GFYV V+VD+ AT+K Sbjct: 114 SIAKYNTGPEPVEGFYVLVVVDSEIGLLLGDIAEEAATRK 153 >ref|XP_002533604.1| conserved hypothetical protein [Ricinus communis] gi|223526505|gb|EEF28773.1| conserved hypothetical protein [Ricinus communis] Length = 299 Score = 171 bits (432), Expect = 1e-40 Identities = 84/143 (58%), Positives = 104/143 (72%) Frame = -1 Query: 483 MRDIASCFSEYSVTVSDASCSSASNLVCRRPGQAFRHPNLIPSIQNAVTCIYKANLSTQK 304 MRDI SCFSE ++ +S SCSS SN VC P +LIPSIQNAVTC+YK LSTQK Sbjct: 1 MRDIVSCFSENAINISHPSCSSYSNNVCISP-------SLIPSIQNAVTCLYKIILSTQK 53 Query: 303 QILISVTWCRNHIGQGLSIKVGDELSSTIKVNMDYRLFRRKKGNRTFESGNSTVEVLWDL 124 Q+L +VTWC+N+ QGL+I G + S++ K+N RLFR+K+G++ ES NS +EV WDL Sbjct: 54 QLLATVTWCKNNTTQGLNINFGTDPSTSFKLNTSTRLFRKKRGSKVIESDNSKIEVFWDL 113 Query: 123 SMARYDLGPEPTDGFYVAVMVDA 55 S ARYD GP P DGFYV VMVD+ Sbjct: 114 SSARYDTGPAPVDGFYVLVMVDS 136 >ref|XP_002328173.1| predicted protein [Populus trichocarpa] gi|222837688|gb|EEE76053.1| predicted protein [Populus trichocarpa] Length = 300 Score = 165 bits (418), Expect = 5e-39 Identities = 83/161 (51%), Positives = 107/161 (66%) Frame = -1 Query: 483 MRDIASCFSEYSVTVSDASCSSASNLVCRRPGQAFRHPNLIPSIQNAVTCIYKANLSTQK 304 MRDI SCFSE ++ VS +SCSS SN C P +L PS+QNAV+C YK LST+K Sbjct: 1 MRDIVSCFSENAIQVSHSSCSSYSNNACISP-------SLTPSVQNAVSCFYKIILSTKK 53 Query: 303 QILISVTWCRNHIGQGLSIKVGDELSSTIKVNMDYRLFRRKKGNRTFESGNSTVEVLWDL 124 Q+L V+WC+NH QGLSIK G++ S++ K++ + RLFR+ KGN+ ES +EV WDL Sbjct: 54 QLLAKVSWCKNHTTQGLSIKFGNDPSTSFKLSTNTRLFRKMKGNKLIESDTVKIEVFWDL 113 Query: 123 SMARYDLGPEPTDGFYVAVMVDAXXXXXXXXXXXXLATKKF 1 S A+Y+LGPEP +GFYV VMVD+ TKKF Sbjct: 114 SSAKYELGPEPVEGFYVLVMVDSEIGLILGDVGEETLTKKF 154 >ref|XP_002312897.1| predicted protein [Populus trichocarpa] gi|222849305|gb|EEE86852.1| predicted protein [Populus trichocarpa] Length = 300 Score = 162 bits (409), Expect = 5e-38 Identities = 82/161 (50%), Positives = 105/161 (65%) Frame = -1 Query: 483 MRDIASCFSEYSVTVSDASCSSASNLVCRRPGQAFRHPNLIPSIQNAVTCIYKANLSTQK 304 MRDI SCFSE ++ VS +SCSS S+ C PG L PS+QNAV+C YK LST+K Sbjct: 1 MRDIVSCFSENAIDVSHSSCSSFSHNACISPG-------LTPSVQNAVSCFYKIILSTRK 53 Query: 303 QILISVTWCRNHIGQGLSIKVGDELSSTIKVNMDYRLFRRKKGNRTFESGNSTVEVLWDL 124 Q+L +V+W +NH QGLSIK G++ S++ K+ R FR+ KGN+ ES S +EV WDL Sbjct: 54 QLLATVSWSKNHTNQGLSIKFGNDPSTSFKLGTHTRFFRKLKGNKLIESDTSKIEVFWDL 113 Query: 123 SMARYDLGPEPTDGFYVAVMVDAXXXXXXXXXXXXLATKKF 1 S A+Y+LGPEP +GFYV VMVD+ TKKF Sbjct: 114 SSAKYELGPEPVEGFYVLVMVDSEIGLILGDVGEETLTKKF 154 >emb|CAN62312.1| hypothetical protein VITISV_018204 [Vitis vinifera] Length = 753 Score = 161 bits (407), Expect = 9e-38 Identities = 79/145 (54%), Positives = 101/145 (69%) Frame = -1 Query: 489 STMRDIASCFSEYSVTVSDASCSSASNLVCRRPGQAFRHPNLIPSIQNAVTCIYKANLST 310 S MR IASC+SE+++ VSD+ CS SN C P +LIPSIQ AVTCIYKA LS Sbjct: 344 SKMRTIASCYSEHAIKVSDSYCSGPSNQACLSP-------SLIPSIQKAVTCIYKARLSN 396 Query: 309 QKQILISVTWCRNHIGQGLSIKVGDELSSTIKVNMDYRLFRRKKGNRTFESGNSTVEVLW 130 QKQ+LI++ WC N +GQG SIK+ ++LSS+ + N FR +G RTFE +S +EV W Sbjct: 397 QKQLLITLNWCNNLVGQGFSIKISNDLSSSFESNAVSHQFRNNRGTRTFELCDSRIEVFW 456 Query: 129 DLSMARYDLGPEPTDGFYVAVMVDA 55 DLS A+YD GPEP +GFYV V+ D+ Sbjct: 457 DLSRAQYDSGPEPINGFYVIVLADS 481