BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009208
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278259.2| PREDICTED: uncharacterized protein LOC100245...    99   3e-19
emb|CBI14979.3| unnamed protein product [Vitis vinifera]               99   3e-19
ref|XP_002511350.1| nucleic acid binding protein, putative [Rici...    91   1e-16
gb|AFK39377.1| unknown [Medicago truncatula]                           82   4e-14
ref|XP_003601216.1| RNA-binding protein [Medicago truncatula] gi...    82   4e-14

>ref|XP_002278259.2| PREDICTED: uncharacterized protein LOC100245077 [Vitis vinifera]
          Length = 421

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 53/119 (44%), Positives = 72/119 (60%)
 Frame = +1

Query: 34  EGEWIVEDLQDATESSGRLSDEGISWDEENWRAQYGQVVQSGEXXXXXXXXXXXXXXEMF 213
           EGE ++ED    T+S G +  +G SWDEENWRAQYGQV++S +                 
Sbjct: 126 EGECVLEDHHGVTDSIGNVVAKGDSWDEENWRAQYGQVIKSEDSIPNFPVVDLW------ 179

Query: 214 TNTVVXXXXXXXXXRQLSRLIGKLVKPSTKLHPSMPSGGRLLRTAAICETSVALVRVSS 390
            +  +          Q++RL+G+LV+ STKLHPSMPSGG L++TA ICE  + LVRV+S
Sbjct: 180 -DWAMVSGVKKDGKGQVARLVGRLVRQSTKLHPSMPSGGGLMKTAPICEVHLDLVRVTS 237


>emb|CBI14979.3| unnamed protein product [Vitis vinifera]
          Length = 483

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 53/119 (44%), Positives = 72/119 (60%)
 Frame = +1

Query: 34  EGEWIVEDLQDATESSGRLSDEGISWDEENWRAQYGQVVQSGEXXXXXXXXXXXXXXEMF 213
           EGE ++ED    T+S G +  +G SWDEENWRAQYGQV++S +                 
Sbjct: 188 EGECVLEDHHGVTDSIGNVVAKGDSWDEENWRAQYGQVIKSEDSIPNFPVVDLW------ 241

Query: 214 TNTVVXXXXXXXXXRQLSRLIGKLVKPSTKLHPSMPSGGRLLRTAAICETSVALVRVSS 390
            +  +          Q++RL+G+LV+ STKLHPSMPSGG L++TA ICE  + LVRV+S
Sbjct: 242 -DWAMVSGVKKDGKGQVARLVGRLVRQSTKLHPSMPSGGGLMKTAPICEVHLDLVRVTS 299


>ref|XP_002511350.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223550465|gb|EEF51952.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 417

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 54/128 (42%), Positives = 67/128 (52%)
 Frame = +1

Query: 1   GEESDSTREIEEGEWIVEDLQDATESSGRLSDEGISWDEENWRAQYGQVVQSGEXXXXXX 180
           G   D T+ +E+G+W+ E     T     +S+E    DEENW+AQYGQVV SGE      
Sbjct: 112 GASHDDTQMLEDGDWMSEHHPTLTSGCESISNEDACKDEENWQAQYGQVVYSGEQPLEDF 171

Query: 181 XXXXXXXXEMFTNTVVXXXXXXXXXRQLSRLIGKLVKPSTKLHPSMPSGGRLLRTAAICE 360
                    M T +              +RL+G+LVK S KLHPSMPS G L RTA ICE
Sbjct: 172 HAVDLWDWAMVTGS------RKDGKDHTTRLVGRLVKRSAKLHPSMPSSG-LFRTAPICE 224

Query: 361 TSVALVRV 384
             + LVRV
Sbjct: 225 AHLDLVRV 232


>gb|AFK39377.1| unknown [Medicago truncatula]
          Length = 507

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 47/122 (38%), Positives = 66/122 (54%)
 Frame = +1

Query: 25  EIEEGEWIVEDLQDATESSGRLSDEGISWDEENWRAQYGQVVQSGEXXXXXXXXXXXXXX 204
           E+EEGEWI +   +   + G   DEGI ++EE WRAQYGQV++S E              
Sbjct: 215 EVEEGEWIPDPEDENHLADGSSIDEGILFEEEKWRAQYGQVIESREDLVLEFPVLDLWNW 274

Query: 205 EMFTNTVVXXXXXXXXXRQLSRLIGKLVKPSTKLHPSMPSGGRLLRTAAICETSVALVRV 384
           EM   +            +++RL+G+LVK S K HPS+ S  +  R+A ICE  + LVRV
Sbjct: 275 EMVRAS------KKDGKDRVARLVGRLVKQSAKRHPSISSVEKKFRSAPICEVDLDLVRV 328

Query: 385 SS 390
            +
Sbjct: 329 KT 330


>ref|XP_003601216.1| RNA-binding protein [Medicago truncatula]
           gi|355490264|gb|AES71467.1| RNA-binding protein
           [Medicago truncatula]
          Length = 560

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 47/122 (38%), Positives = 66/122 (54%)
 Frame = +1

Query: 25  EIEEGEWIVEDLQDATESSGRLSDEGISWDEENWRAQYGQVVQSGEXXXXXXXXXXXXXX 204
           E+EEGEWI +   +   + G   DEGI ++EE WRAQYGQV++S E              
Sbjct: 215 EVEEGEWIPDPEDENHLADGSSIDEGILFEEEKWRAQYGQVIESREDLVLEFPVLDLWNW 274

Query: 205 EMFTNTVVXXXXXXXXXRQLSRLIGKLVKPSTKLHPSMPSGGRLLRTAAICETSVALVRV 384
           EM   +            +++RL+G+LVK S K HPS+ S  +  R+A ICE  + LVRV
Sbjct: 275 EMVRAS------KKDGKDRVARLVGRLVKQSAKRHPSISSVEKKFRSAPICEVDLDLVRV 328

Query: 385 SS 390
            +
Sbjct: 329 KT 330