BLASTX nr result

ID: Coptis24_contig00009202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009202
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26680.3| unnamed protein product [Vitis vinifera]               90   4e-16
ref|XP_002278339.1| PREDICTED: GDP-L-galactose phosphorylase 1 [...    90   4e-16
emb|CAN70988.1| hypothetical protein VITISV_043185 [Vitis vinifera]    90   4e-16
gb|AEN69451.1| VTC [Vitis pseudoreticulata]                            89   9e-16
ref|XP_002530359.1| conserved hypothetical protein [Ricinus comm...    86   6e-15

>emb|CBI26680.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 43/72 (59%), Positives = 54/72 (75%), Gaps = 4/72 (5%)
 Frame = -2

Query: 205 LRIKRVPTVVSNYQKDSEE---APITGCGRNCFRNCCVQGAKLPLYTFKRMKNRMNEKES 35
           LRIKRVPTVVSNYQK+  +     + GCGRNC + CC+QGAKLPLY +K++K+ +NEK S
Sbjct: 4   LRIKRVPTVVSNYQKEDSDDGARQVGGCGRNCLKQCCIQGAKLPLYAYKKVKDVVNEKAS 63

Query: 34  VG-QMKESPVAF 2
            G + KE PV F
Sbjct: 64  SGDENKEQPVPF 75


>ref|XP_002278339.1| PREDICTED: GDP-L-galactose phosphorylase 1 [Vitis vinifera]
          Length = 452

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 43/72 (59%), Positives = 54/72 (75%), Gaps = 4/72 (5%)
 Frame = -2

Query: 205 LRIKRVPTVVSNYQKDSEE---APITGCGRNCFRNCCVQGAKLPLYTFKRMKNRMNEKES 35
           LRIKRVPTVVSNYQK+  +     + GCGRNC + CC+QGAKLPLY +K++K+ +NEK S
Sbjct: 4   LRIKRVPTVVSNYQKEDSDDGARQVGGCGRNCLKQCCIQGAKLPLYAYKKVKDVVNEKAS 63

Query: 34  VG-QMKESPVAF 2
            G + KE PV F
Sbjct: 64  SGDENKEQPVPF 75


>emb|CAN70988.1| hypothetical protein VITISV_043185 [Vitis vinifera]
          Length = 508

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 43/72 (59%), Positives = 54/72 (75%), Gaps = 4/72 (5%)
 Frame = -2

Query: 205 LRIKRVPTVVSNYQKDSEE---APITGCGRNCFRNCCVQGAKLPLYTFKRMKNRMNEKES 35
           LRIKRVPTVVSNYQK+  +     + GCGRNC + CC+QGAKLPLY +K++K+ +NEK S
Sbjct: 4   LRIKRVPTVVSNYQKEDSDDGARQVGGCGRNCLKQCCIQGAKLPLYAYKKVKDVVNEKAS 63

Query: 34  VG-QMKESPVAF 2
            G + KE PV F
Sbjct: 64  SGDENKEQPVPF 75


>gb|AEN69451.1| VTC [Vitis pseudoreticulata]
          Length = 452

 Score = 88.6 bits (218), Expect = 9e-16
 Identities = 42/72 (58%), Positives = 54/72 (75%), Gaps = 4/72 (5%)
 Frame = -2

Query: 205 LRIKRVPTVVSNYQKDSEE---APITGCGRNCFRNCCVQGAKLPLYTFKRMKNRMNEKES 35
           LRIKRVPTVVSNYQK+  +     + GCGRNC + CC+QGAKLPLY +K++++ +NEK S
Sbjct: 4   LRIKRVPTVVSNYQKEDSDDGARQVGGCGRNCLKQCCIQGAKLPLYAYKKVRDVVNEKAS 63

Query: 34  VG-QMKESPVAF 2
            G + KE PV F
Sbjct: 64  SGDENKEQPVPF 75


>ref|XP_002530359.1| conserved hypothetical protein [Ricinus communis]
           gi|223530106|gb|EEF32020.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 453

 Score = 85.9 bits (211), Expect = 6e-15
 Identities = 45/77 (58%), Positives = 53/77 (68%), Gaps = 4/77 (5%)
 Frame = -2

Query: 220 SSKKMLRIKRVPTVVSNYQKDSEE---APITGCGRNCFRNCCVQGAKLPLYTFKRMKNRM 50
           S K ML IKRVPTVVSN+QKD  E       GCGRNC + CC+QGAKLPLY FKR+   +
Sbjct: 2   SGKFMLSIKRVPTVVSNFQKDEAEDGGKKSGGCGRNCLQKCCIQGAKLPLYAFKRVDKIV 61

Query: 49  NEKESV-GQMKESPVAF 2
           +EKE +  +  E PVAF
Sbjct: 62  SEKEVIEHENTEPPVAF 78


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