BLASTX nr result

ID: Coptis24_contig00009201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009201
         (877 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30275.3| unnamed protein product [Vitis vinifera]              222   1e-55
ref|XP_002276979.2| PREDICTED: solute carrier family 35 member F...   215   9e-54
ref|XP_003632702.1| PREDICTED: solute carrier family 35 member F...   212   1e-52
emb|CBI30276.3| unnamed protein product [Vitis vinifera]              212   1e-52
ref|XP_002528716.1| conserved hypothetical protein [Ricinus comm...   204   3e-50

>emb|CBI30275.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score =  222 bits (565), Expect = 1e-55
 Identities = 107/152 (70%), Positives = 126/152 (82%)
 Frame = -3

Query: 458 AVTSFTASLLTNLGVKTPLSQSFFTYLSLALVYTPILLSQRRKLLVPWYWYALAGFIDVQ 279
           AV SF++S + +LGV  PL+QSFFTYLSLALVY  ILL +R+KL + WYWY   GF+DVQ
Sbjct: 29  AVASFSSSFIADLGVDAPLTQSFFTYLSLALVYGSILLYRRQKLRISWYWYLFLGFVDVQ 88

Query: 278 ANYLVIKAYQYSSITSVTLLDCFTIPWVMVLTWIFIGTRYSLGQFFGAALCIGGLGLVVL 99
            NYLV KAYQYSSITSVTLLDC+TIPWV++LTWIF+GTRYSL QFFGAALCI GLGLV+L
Sbjct: 89  GNYLVNKAYQYSSITSVTLLDCWTIPWVIILTWIFLGTRYSLWQFFGAALCIVGLGLVLL 148

Query: 98  SDAKESGSGGKNPIVGDLLVIGGTLGYAISNV 3
           SDA   G  G  P++GD+LVI GTL +A+SNV
Sbjct: 149 SDAGVGGGDGSRPLLGDILVIAGTLFFALSNV 180


>ref|XP_002276979.2| PREDICTED: solute carrier family 35 member F1-like [Vitis vinifera]
          Length = 352

 Score =  215 bits (548), Expect = 9e-54
 Identities = 108/153 (70%), Positives = 127/153 (83%), Gaps = 1/153 (0%)
 Frame = -3

Query: 458 AVTSFTASLLTNLGVKTPLSQSFFTYLSLALVYTPILLSQRRKLLVPWYWYALAGFIDVQ 279
           AV SF++S + +LGV  PL+QSFFTYLSLALVY  ILL +R+KL + WYWY   GF+DVQ
Sbjct: 46  AVASFSSSFIADLGVDAPLTQSFFTYLSLALVYGSILLYRRQKLRISWYWYLFLGFVDVQ 105

Query: 278 ANYLVIKAYQYSSITSVTLLDCFTIPWVMVLTWIFIGTRYSLGQFFGAALCIGGLGLVVL 99
            NYLV KAYQYSSITSVTLLDC+TIPWV++LTWIF+GTRYSL QFFGAALCI GLGLV+L
Sbjct: 106 GNYLVNKAYQYSSITSVTLLDCWTIPWVIILTWIFLGTRYSLWQFFGAALCIVGLGLVLL 165

Query: 98  SDAKESGSG-GKNPIVGDLLVIGGTLGYAISNV 3
           SDA   G G G  P++GD+LVI GTL +A+SNV
Sbjct: 166 SDA---GVGDGSRPLLGDILVIAGTLFFALSNV 195


>ref|XP_003632702.1| PREDICTED: solute carrier family 35 member F1-like [Vitis vinifera]
          Length = 673

 Score =  212 bits (539), Expect = 1e-52
 Identities = 102/152 (67%), Positives = 122/152 (80%)
 Frame = -3

Query: 458 AVTSFTASLLTNLGVKTPLSQSFFTYLSLALVYTPILLSQRRKLLVPWYWYALAGFIDVQ 279
           AV+ FT+S + +LGV  PL+QSFFTYL LALV   ILL +R++L V WYWY   GFIDVQ
Sbjct: 365 AVSGFTSSFIADLGVDAPLTQSFFTYLCLALVNGSILLYRRQRLQVSWYWYLFLGFIDVQ 424

Query: 278 ANYLVIKAYQYSSITSVTLLDCFTIPWVMVLTWIFIGTRYSLGQFFGAALCIGGLGLVVL 99
            NYLV KA+QYSS+TSV LLDC+TIPWV++LTWIF+GTRYS+ QFFGAALC+ GLGLV+L
Sbjct: 425 GNYLVNKAFQYSSLTSVALLDCWTIPWVIILTWIFLGTRYSIWQFFGAALCVAGLGLVLL 484

Query: 98  SDAKESGSGGKNPIVGDLLVIGGTLGYAISNV 3
           SDA   G GG  P++GD LVI GTL  A+SNV
Sbjct: 485 SDAGVGGEGGSRPLLGDTLVIAGTLCIAMSNV 516



 Score =  192 bits (489), Expect = 6e-47
 Identities = 93/152 (61%), Positives = 110/152 (72%)
 Frame = -3

Query: 458 AVTSFTASLLTNLGVKTPLSQSFFTYLSLALVYTPILLSQRRKLLVPWYWYALAGFIDVQ 279
           A +SF  S + +LGV  PL+QSFF YL L LV+  I L +R+ + V W WY   GF+DVQ
Sbjct: 50  AFSSFFTSSVIDLGVNVPLTQSFFAYLCLVLVFGTIRLGRRQNIRVSWIWYLFLGFVDVQ 109

Query: 278 ANYLVIKAYQYSSITSVTLLDCFTIPWVMVLTWIFIGTRYSLGQFFGAALCIGGLGLVVL 99
            NYLV KAYQYSS TSVTLLDC+TIPW M+ TWI +GTRYS+ QFFGAALC+ GL  V L
Sbjct: 110 GNYLVKKAYQYSSATSVTLLDCWTIPWAMIFTWIVLGTRYSIRQFFGAALCVAGLASVFL 169

Query: 98  SDAKESGSGGKNPIVGDLLVIGGTLGYAISNV 3
           SDA   G GG  PI+GD LV+ GTL  A+SNV
Sbjct: 170 SDAGAGGGGGSKPILGDTLVVAGTLFLAMSNV 201


>emb|CBI30276.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score =  212 bits (539), Expect = 1e-52
 Identities = 102/152 (67%), Positives = 122/152 (80%)
 Frame = -3

Query: 458 AVTSFTASLLTNLGVKTPLSQSFFTYLSLALVYTPILLSQRRKLLVPWYWYALAGFIDVQ 279
           AV+ FT+S + +LGV  PL+QSFFTYL LALV   ILL +R++L V WYWY   GFIDVQ
Sbjct: 29  AVSGFTSSFIADLGVDAPLTQSFFTYLCLALVNGSILLYRRQRLQVSWYWYLFLGFIDVQ 88

Query: 278 ANYLVIKAYQYSSITSVTLLDCFTIPWVMVLTWIFIGTRYSLGQFFGAALCIGGLGLVVL 99
            NYLV KA+QYSS+TSV LLDC+TIPWV++LTWIF+GTRYS+ QFFGAALC+ GLGLV+L
Sbjct: 89  GNYLVNKAFQYSSLTSVALLDCWTIPWVIILTWIFLGTRYSIWQFFGAALCVAGLGLVLL 148

Query: 98  SDAKESGSGGKNPIVGDLLVIGGTLGYAISNV 3
           SDA   G GG  P++GD LVI GTL  A+SNV
Sbjct: 149 SDAGVGGEGGSRPLLGDTLVIAGTLCIAMSNV 180


>ref|XP_002528716.1| conserved hypothetical protein [Ricinus communis]
           gi|223531810|gb|EEF33628.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 340

 Score =  204 bits (518), Expect = 3e-50
 Identities = 97/152 (63%), Positives = 121/152 (79%)
 Frame = -3

Query: 458 AVTSFTASLLTNLGVKTPLSQSFFTYLSLALVYTPILLSQRRKLLVPWYWYALAGFIDVQ 279
           AV S T+SL+ +LG+  P++QS F Y +LALV+  ILL +R+KL V WYWY L GF+DVQ
Sbjct: 35  AVCSLTSSLVVDLGIDAPITQSSFNYFALALVFGSILLYRRQKLRVSWYWYLLLGFVDVQ 94

Query: 278 ANYLVIKAYQYSSITSVTLLDCFTIPWVMVLTWIFIGTRYSLGQFFGAALCIGGLGLVVL 99
            NYLV +AYQY+SITSVTLLDC+TI W +VLTW F+GTRYS+ Q FGAALC+ GLGLV+L
Sbjct: 95  GNYLVNRAYQYTSITSVTLLDCWTIVWAIVLTWFFLGTRYSIWQLFGAALCVLGLGLVLL 154

Query: 98  SDAKESGSGGKNPIVGDLLVIGGTLGYAISNV 3
           SDA   G GG  P++GDLLVI GT+ +A+SNV
Sbjct: 155 SDAGVGGGGGSRPLLGDLLVIAGTIFFALSNV 186


Top