BLASTX nr result

ID: Coptis24_contig00009199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009199
         (891 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266452.2| PREDICTED: disease resistance response prote...   206   6e-51
ref|XP_002297761.1| predicted protein [Populus trichocarpa] gi|2...   184   2e-44
ref|XP_002513105.1| Disease resistance response protein, putativ...   180   4e-43
ref|XP_002280963.1| PREDICTED: disease resistance response prote...   171   2e-40
gb|ABK93789.1| unknown [Populus trichocarpa]                          171   2e-40

>ref|XP_002266452.2| PREDICTED: disease resistance response protein 206-like [Vitis
           vinifera] gi|147821135|emb|CAN62170.1| hypothetical
           protein VITISV_027159 [Vitis vinifera]
           gi|296081293|emb|CBI17737.3| unnamed protein product
           [Vitis vinifera]
          Length = 182

 Score =  206 bits (524), Expect = 6e-51
 Identities = 110/183 (60%), Positives = 136/183 (74%), Gaps = 1/183 (0%)
 Frame = -2

Query: 851 MASALTYFFNLILLSTFSIIINGENSGWYSATKVMDKMEEKVTNLHFYFHDTVSGDHAST 672
           MAS LTY     L STFSI I    S  + A ++     EKV++LHFYFHD +SG + + 
Sbjct: 1   MASFLTYTTLFSLFSTFSITIPAAFSQQF-AEEIATMRLEKVSHLHFYFHDILSGKNPTA 59

Query: 671 IVIAGPKDTASFGTTRIVDDPLTEGPESTSKLIGKAQGVYSMAAQQDVSLLMVITCAFME 492
             IAGPK    FG T +VDD LTEGPE +SKL+G+AQG+Y+++AQQ+ +LLMV+  AFME
Sbjct: 60  TQIAGPKK-GHFGVTMMVDDALTEGPEPSSKLLGRAQGLYALSAQQEPALLMVMNFAFME 118

Query: 491 DKYNGSTLSVLGRNPVLQTVREMPIVGGTGLFRSARGYALAHTVW-SNTLGDAVVEYNVT 315
            KYNGS++SVLGRNPV+  VREMPIVGG+GLFR ARGYALAHTVW     GDA+VEYNV+
Sbjct: 119 GKYNGSSISVLGRNPVMHAVREMPIVGGSGLFRYARGYALAHTVWFDGKTGDAIVEYNVS 178

Query: 314 VIH 306
           V+H
Sbjct: 179 VLH 181


>ref|XP_002297761.1| predicted protein [Populus trichocarpa] gi|222845019|gb|EEE82566.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score =  184 bits (467), Expect = 2e-44
 Identities = 93/146 (63%), Positives = 110/146 (75%)
 Frame = -2

Query: 743 KMEEKVTNLHFYFHDTVSGDHASTIVIAGPKDTASFGTTRIVDDPLTEGPESTSKLIGKA 564
           K  EK T+LHFYFHD VSG + + I IAGP D  +FG T + DDPLTEG E +SK +GKA
Sbjct: 39  KRIEKTTHLHFYFHDIVSGKNPTAIRIAGP-DNYAFGNTMMADDPLTEGLEISSKPVGKA 97

Query: 563 QGVYSMAAQQDVSLLMVITCAFMEDKYNGSTLSVLGRNPVLQTVREMPIVGGTGLFRSAR 384
           QG+Y+ A+Q D  LLMV+  AF E KYNGS++S+LGRN +L  VREMPIVGG+GLFR A 
Sbjct: 98  QGLYAFASQNDFCLLMVMNFAFTEGKYNGSSISILGRNQILNDVREMPIVGGSGLFRLAH 157

Query: 383 GYALAHTVWSNTLGDAVVEYNVTVIH 306
           GYALAHTVW +  GDA VEYNV V H
Sbjct: 158 GYALAHTVWFDEQGDATVEYNVYVSH 183


>ref|XP_002513105.1| Disease resistance response protein, putative [Ricinus communis]
           gi|223548116|gb|EEF49608.1| Disease resistance response
           protein, putative [Ricinus communis]
          Length = 186

 Score =  180 bits (456), Expect = 4e-43
 Identities = 98/186 (52%), Positives = 127/186 (68%), Gaps = 4/186 (2%)
 Frame = -2

Query: 851 MASALTYFFNLILLSTFSIIINGENSGWYS--ATKVMDKMEEKVTNLHFYFHDTVSGDHA 678
           MA+   Y    +    F  I    +  +Y   A  +  K EEK T+LHFYFHD V+G +A
Sbjct: 1   MAALAIYTLFTLYFILFPSIFTLSHGVFYEELAEGIAIKREEKTTHLHFYFHDIVAGKNA 60

Query: 677 STIVIAGPKDTA--SFGTTRIVDDPLTEGPESTSKLIGKAQGVYSMAAQQDVSLLMVITC 504
           + I IAGP D++  +FG T ++DDPLTEGPE TSKLIG+AQG+Y+MAAQ D  LLMV+  
Sbjct: 61  TAIRIAGPPDSSLTNFGNTMMIDDPLTEGPELTSKLIGRAQGMYAMAAQNDFLLLMVLNY 120

Query: 503 AFMEDKYNGSTLSVLGRNPVLQTVREMPIVGGTGLFRSARGYALAHTVWSNTLGDAVVEY 324
           AF E +YNGS++S+LGRN VL  +REMPIVGG+G F+ A GYALAHT+  + +  A VEY
Sbjct: 121 AFTEGEYNGSSISILGRNHVLDDMREMPIVGGSGAFKLAHGYALAHTIHMD-IEAATVEY 179

Query: 323 NVTVIH 306
           +V V H
Sbjct: 180 DVYVTH 185


>ref|XP_002280963.1| PREDICTED: disease resistance response protein 206 [Vitis vinifera]
          Length = 188

 Score =  171 bits (434), Expect = 2e-40
 Identities = 90/187 (48%), Positives = 121/187 (64%), Gaps = 5/187 (2%)
 Frame = -2

Query: 851 MASALTYFFNLILLSTFSIIINGENSGWYSATKVMDKMEEKVTNLHFYFHDTVSGDHAST 672
           MA  LTYF  L   +  + + +G       + + +D   EK+++LHFYFHD ++G + + 
Sbjct: 1   MAKTLTYFAFLFFSTVAAAVGDGHTFSRNLSPESLDLKREKLSHLHFYFHDVITGPNPTV 60

Query: 671 IVIAGP----KDTASFGTTRIVDDPLTEGPESTSKLIGKAQGVYSMAAQQDVSLLMVITC 504
           + +A      K    FG   ++DDPLT GPE +SKL+G+AQG+Y+ A+Q++  LLMV+  
Sbjct: 61  VRVAEAAVTNKSATLFGGVAVLDDPLTVGPEPSSKLVGRAQGMYAAASQKEFGLLMVMNF 120

Query: 503 AFMEDKYNGSTLSVLGRNPVLQTVREMPIVGGTGLFRSARGYALAHTVWSNT-LGDAVVE 327
           AFME KYNGSTLSVLGRN +   VREMPI+GG+G+FR ARGY  A T   N   GDAVVE
Sbjct: 121 AFMEGKYNGSTLSVLGRNTIFSKVREMPIIGGSGVFRYARGYVEARTYSFNVKSGDAVVE 180

Query: 326 YNVTVIH 306
           YNV   H
Sbjct: 181 YNVYAFH 187


>gb|ABK93789.1| unknown [Populus trichocarpa]
          Length = 194

 Score =  171 bits (433), Expect = 2e-40
 Identities = 94/182 (51%), Positives = 122/182 (67%), Gaps = 7/182 (3%)
 Frame = -2

Query: 830 FFNLILLSTFSIIINGENSGW--YSATKVMDKMEEKVTNLHFYFHDTVSGDHASTIVIAG 657
           F  L ++ ++ II N ++  +  Y +   +   +EK+++LHFYFHD VSG + + + IA 
Sbjct: 12  FLVLSIVLSYLIIANAKSQRFTKYLSPATLGLKKEKLSHLHFYFHDIVSGKNPTAVRIAR 71

Query: 656 PKDT----ASFGTTRIVDDPLTEGPESTSKLIGKAQGVYSMAAQQDVSLLMVITCAFMED 489
              T      FG   ++DDPLT  PE +SKL+G+AQG Y+ A+Q DV LLM +   FME 
Sbjct: 72  ADMTNTSSTGFGMVAMIDDPLTMTPELSSKLVGRAQGFYASASQNDVGLLMTMNFVFMEG 131

Query: 488 KYNGSTLSVLGRNPVLQTVREMPIVGGTGLFRSARGYALAHT-VWSNTLGDAVVEYNVTV 312
           K+NGSTLSVLGRN V  TVREMPIVGG+GLFR ARGYA A T ++  T GDAVVEYNV V
Sbjct: 132 KFNGSTLSVLGRNSVFSTVREMPIVGGSGLFRFARGYAQASTHMFDRTTGDAVVEYNVYV 191

Query: 311 IH 306
            H
Sbjct: 192 FH 193


Top