BLASTX nr result

ID: Coptis24_contig00009198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009198
         (759 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524568.1| conserved hypothetical protein [Ricinus comm...   140   4e-31
ref|XP_002320545.1| predicted protein [Populus trichocarpa] gi|2...   137   2e-30
ref|XP_003635119.1| PREDICTED: uncharacterized protein LOC100248...   129   7e-28
ref|NP_001047394.1| Os02g0609400 [Oryza sativa Japonica Group] g...   112   8e-23
ref|XP_002275394.1| PREDICTED: uncharacterized protein LOC100248...   108   2e-21

>ref|XP_002524568.1| conserved hypothetical protein [Ricinus communis]
           gi|223536121|gb|EEF37776.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 172

 Score =  140 bits (352), Expect = 4e-31
 Identities = 81/165 (49%), Positives = 100/165 (60%), Gaps = 26/165 (15%)
 Frame = -2

Query: 710 PAPDSGAVVRRYAPPNQRNRPLSRRKSGGDRTGNPPYYFGPGEEKT----TASSVKIDHP 543
           P PDS AVV+RYAPPNQRNR L+RRKSG DR       F    EK     + +   +DH 
Sbjct: 8   PQPDSSAVVKRYAPPNQRNRSLNRRKSG-DRLDRSNSLFANDAEKNQHVPSRNIPVLDHF 66

Query: 542 EAATSS--------SLITIPGCCRSEAAQLLTDRWVAAVHYYNDPSIDLSERPVMYSGAG 387
           +  +S+         LI + GC RSEA+QLL +RW  A+H YND S+DLSERP MYSG+ 
Sbjct: 67  DIGSSNLMHENSHPRLIALEGCYRSEASQLLNERWAQAMHNYNDTSVDLSERPAMYSGSS 126

Query: 386 APAWGHSRLSH--------------QMDFLTELRRAMLNANASLD 294
           A AWGHSRL H              QMDFL+ELRRA+ +A+ + D
Sbjct: 127 ASAWGHSRLPHQFMLQANSGPSSGSQMDFLSELRRAIRDASPNSD 171


>ref|XP_002320545.1| predicted protein [Populus trichocarpa] gi|222861318|gb|EEE98860.1|
           predicted protein [Populus trichocarpa]
          Length = 180

 Score =  137 bits (346), Expect = 2e-30
 Identities = 80/169 (47%), Positives = 98/169 (57%), Gaps = 30/169 (17%)
 Frame = -2

Query: 710 PAPDSGAVVRRYAPPNQRNRPLSRRKSGGDRTGNPPYYFGPGEEK-------TTASSVKI 552
           P PDS   V+RYAPPNQRNR L+RRKSG         Y   GE+         T +++  
Sbjct: 12  PPPDS-TTVKRYAPPNQRNRSLNRRKSGDRFDRGNSLYQNDGEKNQQPQSHANTRNNIPD 70

Query: 551 DHPEAATSS---------SLITIPGCCRSEAAQLLTDRWVAAVHYYNDPSIDLSERPVMY 399
            H +A +SS         +LI + GCCRSEA+QLL DRW A +H YND +IDLSERPVMY
Sbjct: 71  HHGDAGSSSLLNDNSSPHTLIPLEGCCRSEASQLLNDRWAAIMHSYNDTAIDLSERPVMY 130

Query: 398 SGAGAPAWGHSRLSH--------------QMDFLTELRRAMLNANASLD 294
           SG+  PAWG  +L H              QMDFL+EL RA+ NA AS +
Sbjct: 131 SGSSPPAWGQFKLPHQVMSPVNSVGAPNPQMDFLSELHRAVQNAKASYE 179


>ref|XP_003635119.1| PREDICTED: uncharacterized protein LOC100248340 [Vitis vinifera]
           gi|297736665|emb|CBI25682.3| unnamed protein product
           [Vitis vinifera]
          Length = 158

 Score =  129 bits (324), Expect = 7e-28
 Identities = 77/150 (51%), Positives = 93/150 (62%), Gaps = 15/150 (10%)
 Frame = -2

Query: 722 MIETPA---PDSGAVVRRYAPPNQRNRPLSRRKSGG--DRTGNPPYYFGPGEEKTTASSV 558
           M+E P+   P S    +RYAPPNQRNR L+RRKSG   DR  N     G   +     +V
Sbjct: 1   MLENPSGTDPPSSVKQQRYAPPNQRNRSLNRRKSGERFDRINNSFANDGDKSQVVAPRNV 60

Query: 557 -KIDHPEAATSS--------SLITIPGCCRSEAAQLLTDRWVAAVHYYNDPSIDLSERPV 405
             ID  ++ +S+         LI + GCC SEA+QLL DRW AA+H  N+ S+DL ERPV
Sbjct: 61  PNIDQGDSGSSNILNENARPGLIALDGCCSSEASQLLNDRWAAAMHGCNNQSLDLPERPV 120

Query: 404 MYSGAGAPAWGHSRLSHQ-MDFLTELRRAM 318
           MYSG+GA AWGH RL HQ MDF  ELRRAM
Sbjct: 121 MYSGSGASAWGHFRLPHQMMDFSGELRRAM 150


>ref|NP_001047394.1| Os02g0609400 [Oryza sativa Japonica Group]
           gi|47496841|dbj|BAD19601.1| putative iron-stress related
           protein [Oryza sativa Japonica Group]
           gi|47497956|dbj|BAD20161.1| putative iron-stress related
           protein [Oryza sativa Japonica Group]
           gi|113536925|dbj|BAF09308.1| Os02g0609400 [Oryza sativa
           Japonica Group] gi|215692432|dbj|BAG87852.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215767709|dbj|BAG99937.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218191143|gb|EEC73570.1| hypothetical protein
           OsI_08016 [Oryza sativa Indica Group]
          Length = 158

 Score =  112 bits (280), Expect = 8e-23
 Identities = 63/137 (45%), Positives = 82/137 (59%), Gaps = 14/137 (10%)
 Frame = -2

Query: 686 VRRYAPPNQRNRPLSRRKSGGDRTGNPPYYFGPGEEKTTASSVK-----------IDHPE 540
           ++RY PP  RNR  +RRKSG DR     Y +    EK+ A S+K             +P+
Sbjct: 9   IKRYTPPVHRNRANNRRKSG-DRAEKASYLYNNDGEKSHAPSLKNLPPIIPHETFFSNPQ 67

Query: 539 AATSSS-LITIPGCCRSEAAQLLTDRWVAAVHYYNDPSIDLSERPVMYSGAGAPAWGHS- 366
              S + LI + GCC SEAAQLL DRW AA++ YND S D  ++PVMYSG+   +WGH  
Sbjct: 68  NDYSQTRLIPLEGCCASEAAQLLNDRWAAAMNLYNDQSYDSPDKPVMYSGSSGSSWGHGH 127

Query: 365 -RLSHQMDFLTELRRAM 318
            +L HQM+F  ELRRA+
Sbjct: 128 MKLPHQMNFSEELRRAL 144


>ref|XP_002275394.1| PREDICTED: uncharacterized protein LOC100248340 isoform 2 [Vitis
           vinifera]
          Length = 151

 Score =  108 bits (269), Expect = 2e-21
 Identities = 70/150 (46%), Positives = 86/150 (57%), Gaps = 15/150 (10%)
 Frame = -2

Query: 722 MIETPA---PDSGAVVRRYAPPNQRNRPLSRRKSGG--DRTGNPPYYFGPGEEKTTASSV 558
           M+E P+   P S    +RYAPPNQRNR L+RRKSG   DR  N     G   +     +V
Sbjct: 1   MLENPSGTDPPSSVKQQRYAPPNQRNRSLNRRKSGERFDRINNSFANDGDKSQVVAPRNV 60

Query: 557 -KIDHPEAATSS--------SLITIPGCCRSEAAQLLTDRWVAAVHYYNDPSIDLSERPV 405
             ID  ++ +S+         LI + GCC SEA+QLL DRW AA+H  N+ S+DL     
Sbjct: 61  PNIDQGDSGSSNILNENARPGLIALDGCCSSEASQLLNDRWAAAMHGCNNQSLDL----- 115

Query: 404 MYSGAGAPAWGHSRLSHQ-MDFLTELRRAM 318
              G+GA AWGH RL HQ MDF  ELRRAM
Sbjct: 116 --PGSGASAWGHFRLPHQMMDFSGELRRAM 143


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