BLASTX nr result

ID: Coptis24_contig00009184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009184
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001060455.1| Os07g0645400 [Oryza sativa Japonica Group] g...    74   1e-11
ref|XP_003557368.1| PREDICTED: NADH dehydrogenase [ubiquinone] f...    74   1e-11
dbj|BAJ94094.1| predicted protein [Hordeum vulgare subsp. vulgar...    74   1e-11
ref|XP_002315622.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
gb|ACE96395.1| esterase/lipase/thioesterase [Populus tremula] gi...    74   1e-11

>ref|NP_001060455.1| Os07g0645400 [Oryza sativa Japonica Group]
           gi|23307584|dbj|BAC16718.1| putative NADH dehydrogenase
           [Oryza sativa Japonica Group]
           gi|113611991|dbj|BAF22369.1| Os07g0645400 [Oryza sativa
           Japonica Group]
          Length = 504

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 39/65 (60%), Positives = 43/65 (66%), Gaps = 16/65 (24%)
 Frame = -1

Query: 148 VVDAIAGLSYFYKYESCEKCTPCIEGIG*LWMIIERL----------------TKQIDRH 17
           VVDAIA LSYFYK+ESC +CTPC EG G LWMI+ERL                TKQI+ H
Sbjct: 404 VVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGH 463

Query: 16  TICAL 2
           TICAL
Sbjct: 464 TICAL 468


>ref|XP_003557368.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
           mitochondrial-like [Brachypodium distachyon]
          Length = 535

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 39/65 (60%), Positives = 43/65 (66%), Gaps = 16/65 (24%)
 Frame = -1

Query: 148 VVDAIAGLSYFYKYESCEKCTPCIEGIG*LWMIIERL----------------TKQIDRH 17
           VVDAIA LSYFYK+ESC +CTPC EG G LWMI+ERL                TKQI+ H
Sbjct: 434 VVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGH 493

Query: 16  TICAL 2
           TICAL
Sbjct: 494 TICAL 498


>dbj|BAJ94094.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326490708|dbj|BAJ90021.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 505

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 39/65 (60%), Positives = 43/65 (66%), Gaps = 16/65 (24%)
 Frame = -1

Query: 148 VVDAIAGLSYFYKYESCEKCTPCIEGIG*LWMIIERL----------------TKQIDRH 17
           VVDAIA LSYFYK+ESC +CTPC EG G LWMI+ERL                TKQI+ H
Sbjct: 404 VVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGH 463

Query: 16  TICAL 2
           TICAL
Sbjct: 464 TICAL 468


>ref|XP_002315622.1| predicted protein [Populus trichocarpa] gi|222864662|gb|EEF01793.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 39/65 (60%), Positives = 43/65 (66%), Gaps = 16/65 (24%)
 Frame = -1

Query: 148 VVDAIAGLSYFYKYESCEKCTPCIEGIG*LWMIIERL----------------TKQIDRH 17
           VVDAIA LSYFYK+ESC +CTPC EG G LWMI+ERL                TKQI+ H
Sbjct: 385 VVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGH 444

Query: 16  TICAL 2
           TICAL
Sbjct: 445 TICAL 449


>gb|ACE96395.1| esterase/lipase/thioesterase [Populus tremula]
           gi|190895766|gb|ACE96396.1| esterase/lipase/thioesterase
           [Populus tremula] gi|190895768|gb|ACE96397.1|
           esterase/lipase/thioesterase [Populus tremula]
           gi|190895770|gb|ACE96398.1| esterase/lipase/thioesterase
           [Populus tremula]
          Length = 396

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 39/65 (60%), Positives = 43/65 (66%), Gaps = 16/65 (24%)
 Frame = -1

Query: 148 VVDAIAGLSYFYKYESCEKCTPCIEGIG*LWMIIERL----------------TKQIDRH 17
           VVDAIA LSYFYK+ESC +CTPC EG G LWMI+ERL                TKQI+ H
Sbjct: 320 VVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGH 379

Query: 16  TICAL 2
           TICAL
Sbjct: 380 TICAL 384


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