BLASTX nr result

ID: Coptis24_contig00009183 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009183
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30307.3| unnamed protein product [Vitis vinifera]              211   6e-53
ref|XP_002276489.1| PREDICTED: ABC transporter B family member 2...   211   6e-53
ref|XP_002530326.1| abc transporter, putative [Ricinus communis]...   205   3e-51
ref|XP_002308470.1| ABC transporter family, retinal flippase sub...   204   6e-51
ref|XP_004149200.1| PREDICTED: ABC transporter B family member 2...   196   2e-48

>emb|CBI30307.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  211 bits (536), Expect = 6e-53
 Identities = 106/150 (70%), Positives = 129/150 (86%)
 Frame = +1

Query: 1   YKIRVYVFQKVLERDLGFFESGNGVSAGDIAYRITAEASDVADTVYALINSILPSTLQFV 180
           YK+RV+ F KVL+RDL FFE G+ VS GDIAYR+TAEASDVADTV+AL+N+I+PS LQ  
Sbjct: 238 YKVRVFAFDKVLQRDLEFFEGGDAVSPGDIAYRMTAEASDVADTVHALLNTIVPSALQLS 297

Query: 181 AMATQMVLLNPVLTLISALVIPCISLVIAHLGETLRQISNEAHLTVAKLSEYLNEVLPSM 360
           AMATQM+ ++P L+LISALVIP +SLVIAHLGE LR+IS  AHL++A LS YLNE+LPS+
Sbjct: 298 AMATQMLFISPTLSLISALVIPFMSLVIAHLGERLRKISKRAHLSIAALSAYLNEILPSI 357

Query: 361 LFVKASNAELCECSRFQRLAHADLSKNLRK 450
           LFVKASNAEL E +RF+RLAH DLS+ L+K
Sbjct: 358 LFVKASNAELSESARFRRLAHTDLSERLKK 387


>ref|XP_002276489.1| PREDICTED: ABC transporter B family member 29, chloroplastic [Vitis
           vinifera]
          Length = 630

 Score =  211 bits (536), Expect = 6e-53
 Identities = 106/150 (70%), Positives = 129/150 (86%)
 Frame = +1

Query: 1   YKIRVYVFQKVLERDLGFFESGNGVSAGDIAYRITAEASDVADTVYALINSILPSTLQFV 180
           YK+RV+ F KVL+RDL FFE G+ VS GDIAYR+TAEASDVADTV+AL+N+I+PS LQ  
Sbjct: 144 YKVRVFAFDKVLQRDLEFFEGGDAVSPGDIAYRMTAEASDVADTVHALLNTIVPSALQLS 203

Query: 181 AMATQMVLLNPVLTLISALVIPCISLVIAHLGETLRQISNEAHLTVAKLSEYLNEVLPSM 360
           AMATQM+ ++P L+LISALVIP +SLVIAHLGE LR+IS  AHL++A LS YLNE+LPS+
Sbjct: 204 AMATQMLFISPTLSLISALVIPFMSLVIAHLGERLRKISKRAHLSIAALSAYLNEILPSI 263

Query: 361 LFVKASNAELCECSRFQRLAHADLSKNLRK 450
           LFVKASNAEL E +RF+RLAH DLS+ L+K
Sbjct: 264 LFVKASNAELSESARFRRLAHTDLSERLKK 293


>ref|XP_002530326.1| abc transporter, putative [Ricinus communis]
           gi|223530130|gb|EEF32042.1| abc transporter, putative
           [Ricinus communis]
          Length = 650

 Score =  205 bits (522), Expect = 3e-51
 Identities = 98/150 (65%), Positives = 133/150 (88%)
 Frame = +1

Query: 1   YKIRVYVFQKVLERDLGFFESGNGVSAGDIAYRITAEASDVADTVYALINSILPSTLQFV 180
           Y+IRV+VF++VL+R L FFE G+GVS+GDIAYRITA+A+DV+DT+YAL+N++LPS LQ  
Sbjct: 163 YEIRVHVFERVLKRQLAFFEGGSGVSSGDIAYRITAQAADVSDTLYALLNTVLPSALQLS 222

Query: 181 AMATQMVLLNPVLTLISALVIPCISLVIAHLGETLRQISNEAHLTVAKLSEYLNEVLPSM 360
           AMA++M+ ++PVL+LISA+VIPC++  IA LGE LR+IS +AHL++A LS YLNEVLP++
Sbjct: 223 AMASRMLAISPVLSLISAMVIPCMAFAIACLGERLRKISKKAHLSIATLSAYLNEVLPAI 282

Query: 361 LFVKASNAELCECSRFQRLAHADLSKNLRK 450
           LFVKA+N ELCE +RFQRLAHADL+++ +K
Sbjct: 283 LFVKANNGELCESARFQRLAHADLTEHFKK 312


>ref|XP_002308470.1| ABC transporter family, retinal flippase subfamily [Populus
           trichocarpa] gi|222854446|gb|EEE91993.1| ABC transporter
           family, retinal flippase subfamily [Populus trichocarpa]
          Length = 570

 Score =  204 bits (519), Expect = 6e-51
 Identities = 100/150 (66%), Positives = 130/150 (86%)
 Frame = +1

Query: 1   YKIRVYVFQKVLERDLGFFESGNGVSAGDIAYRITAEASDVADTVYALINSILPSTLQFV 180
           YKIRV+VF++VLER+LGFFE G  VS+GD+AYRITAEA+DVADT+YAL+N+I+PS LQ  
Sbjct: 85  YKIRVFVFERVLERELGFFEGGGAVSSGDVAYRITAEAADVADTLYALLNTIVPSALQLS 144

Query: 181 AMATQMVLLNPVLTLISALVIPCISLVIAHLGETLRQISNEAHLTVAKLSEYLNEVLPSM 360
           AMA++M++++P L+LISA+VIPC +L IA+LG  LR+IS +A LT++ LS YLNEVLP++
Sbjct: 145 AMASRMLVISPALSLISAMVIPCTALAIAYLGTRLRKISKKAQLTISALSAYLNEVLPAI 204

Query: 361 LFVKASNAELCECSRFQRLAHADLSKNLRK 450
           LFVKASNAE CE +RF+RLA+ADLS  L K
Sbjct: 205 LFVKASNAEFCEIARFERLAYADLSALLTK 234


>ref|XP_004149200.1| PREDICTED: ABC transporter B family member 29, chloroplastic-like
           [Cucumis sativus] gi|449522662|ref|XP_004168345.1|
           PREDICTED: ABC transporter B family member 29,
           chloroplastic-like [Cucumis sativus]
          Length = 643

 Score =  196 bits (497), Expect = 2e-48
 Identities = 99/150 (66%), Positives = 124/150 (82%)
 Frame = +1

Query: 1   YKIRVYVFQKVLERDLGFFESGNGVSAGDIAYRITAEASDVADTVYALINSILPSTLQFV 180
           Y+IR+ VF++VL  DL FFE G GVS+GDIAYRITAEASDVADTVY+L+N+++PS LQ  
Sbjct: 159 YEIRLRVFERVLAMDLDFFEGGTGVSSGDIAYRITAEASDVADTVYSLLNTVVPSMLQLS 218

Query: 181 AMATQMVLLNPVLTLISALVIPCISLVIAHLGETLRQISNEAHLTVAKLSEYLNEVLPSM 360
           AMATQM+ ++PVL+LISALVIPC++LVIA+LGE   +IS  A L++A LS YLNEVLP+ 
Sbjct: 219 AMATQMLAISPVLSLISALVIPCVALVIAYLGERQHRISKMASLSIANLSSYLNEVLPAF 278

Query: 361 LFVKASNAELCECSRFQRLAHADLSKNLRK 450
           LFVKA++AE CE  RFQRLA  DL + L+K
Sbjct: 279 LFVKANSAEFCENIRFQRLARTDLYERLKK 308


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