BLASTX nr result
ID: Coptis24_contig00009183
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00009183 (451 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI30307.3| unnamed protein product [Vitis vinifera] 211 6e-53 ref|XP_002276489.1| PREDICTED: ABC transporter B family member 2... 211 6e-53 ref|XP_002530326.1| abc transporter, putative [Ricinus communis]... 205 3e-51 ref|XP_002308470.1| ABC transporter family, retinal flippase sub... 204 6e-51 ref|XP_004149200.1| PREDICTED: ABC transporter B family member 2... 196 2e-48 >emb|CBI30307.3| unnamed protein product [Vitis vinifera] Length = 723 Score = 211 bits (536), Expect = 6e-53 Identities = 106/150 (70%), Positives = 129/150 (86%) Frame = +1 Query: 1 YKIRVYVFQKVLERDLGFFESGNGVSAGDIAYRITAEASDVADTVYALINSILPSTLQFV 180 YK+RV+ F KVL+RDL FFE G+ VS GDIAYR+TAEASDVADTV+AL+N+I+PS LQ Sbjct: 238 YKVRVFAFDKVLQRDLEFFEGGDAVSPGDIAYRMTAEASDVADTVHALLNTIVPSALQLS 297 Query: 181 AMATQMVLLNPVLTLISALVIPCISLVIAHLGETLRQISNEAHLTVAKLSEYLNEVLPSM 360 AMATQM+ ++P L+LISALVIP +SLVIAHLGE LR+IS AHL++A LS YLNE+LPS+ Sbjct: 298 AMATQMLFISPTLSLISALVIPFMSLVIAHLGERLRKISKRAHLSIAALSAYLNEILPSI 357 Query: 361 LFVKASNAELCECSRFQRLAHADLSKNLRK 450 LFVKASNAEL E +RF+RLAH DLS+ L+K Sbjct: 358 LFVKASNAELSESARFRRLAHTDLSERLKK 387 >ref|XP_002276489.1| PREDICTED: ABC transporter B family member 29, chloroplastic [Vitis vinifera] Length = 630 Score = 211 bits (536), Expect = 6e-53 Identities = 106/150 (70%), Positives = 129/150 (86%) Frame = +1 Query: 1 YKIRVYVFQKVLERDLGFFESGNGVSAGDIAYRITAEASDVADTVYALINSILPSTLQFV 180 YK+RV+ F KVL+RDL FFE G+ VS GDIAYR+TAEASDVADTV+AL+N+I+PS LQ Sbjct: 144 YKVRVFAFDKVLQRDLEFFEGGDAVSPGDIAYRMTAEASDVADTVHALLNTIVPSALQLS 203 Query: 181 AMATQMVLLNPVLTLISALVIPCISLVIAHLGETLRQISNEAHLTVAKLSEYLNEVLPSM 360 AMATQM+ ++P L+LISALVIP +SLVIAHLGE LR+IS AHL++A LS YLNE+LPS+ Sbjct: 204 AMATQMLFISPTLSLISALVIPFMSLVIAHLGERLRKISKRAHLSIAALSAYLNEILPSI 263 Query: 361 LFVKASNAELCECSRFQRLAHADLSKNLRK 450 LFVKASNAEL E +RF+RLAH DLS+ L+K Sbjct: 264 LFVKASNAELSESARFRRLAHTDLSERLKK 293 >ref|XP_002530326.1| abc transporter, putative [Ricinus communis] gi|223530130|gb|EEF32042.1| abc transporter, putative [Ricinus communis] Length = 650 Score = 205 bits (522), Expect = 3e-51 Identities = 98/150 (65%), Positives = 133/150 (88%) Frame = +1 Query: 1 YKIRVYVFQKVLERDLGFFESGNGVSAGDIAYRITAEASDVADTVYALINSILPSTLQFV 180 Y+IRV+VF++VL+R L FFE G+GVS+GDIAYRITA+A+DV+DT+YAL+N++LPS LQ Sbjct: 163 YEIRVHVFERVLKRQLAFFEGGSGVSSGDIAYRITAQAADVSDTLYALLNTVLPSALQLS 222 Query: 181 AMATQMVLLNPVLTLISALVIPCISLVIAHLGETLRQISNEAHLTVAKLSEYLNEVLPSM 360 AMA++M+ ++PVL+LISA+VIPC++ IA LGE LR+IS +AHL++A LS YLNEVLP++ Sbjct: 223 AMASRMLAISPVLSLISAMVIPCMAFAIACLGERLRKISKKAHLSIATLSAYLNEVLPAI 282 Query: 361 LFVKASNAELCECSRFQRLAHADLSKNLRK 450 LFVKA+N ELCE +RFQRLAHADL+++ +K Sbjct: 283 LFVKANNGELCESARFQRLAHADLTEHFKK 312 >ref|XP_002308470.1| ABC transporter family, retinal flippase subfamily [Populus trichocarpa] gi|222854446|gb|EEE91993.1| ABC transporter family, retinal flippase subfamily [Populus trichocarpa] Length = 570 Score = 204 bits (519), Expect = 6e-51 Identities = 100/150 (66%), Positives = 130/150 (86%) Frame = +1 Query: 1 YKIRVYVFQKVLERDLGFFESGNGVSAGDIAYRITAEASDVADTVYALINSILPSTLQFV 180 YKIRV+VF++VLER+LGFFE G VS+GD+AYRITAEA+DVADT+YAL+N+I+PS LQ Sbjct: 85 YKIRVFVFERVLERELGFFEGGGAVSSGDVAYRITAEAADVADTLYALLNTIVPSALQLS 144 Query: 181 AMATQMVLLNPVLTLISALVIPCISLVIAHLGETLRQISNEAHLTVAKLSEYLNEVLPSM 360 AMA++M++++P L+LISA+VIPC +L IA+LG LR+IS +A LT++ LS YLNEVLP++ Sbjct: 145 AMASRMLVISPALSLISAMVIPCTALAIAYLGTRLRKISKKAQLTISALSAYLNEVLPAI 204 Query: 361 LFVKASNAELCECSRFQRLAHADLSKNLRK 450 LFVKASNAE CE +RF+RLA+ADLS L K Sbjct: 205 LFVKASNAEFCEIARFERLAYADLSALLTK 234 >ref|XP_004149200.1| PREDICTED: ABC transporter B family member 29, chloroplastic-like [Cucumis sativus] gi|449522662|ref|XP_004168345.1| PREDICTED: ABC transporter B family member 29, chloroplastic-like [Cucumis sativus] Length = 643 Score = 196 bits (497), Expect = 2e-48 Identities = 99/150 (66%), Positives = 124/150 (82%) Frame = +1 Query: 1 YKIRVYVFQKVLERDLGFFESGNGVSAGDIAYRITAEASDVADTVYALINSILPSTLQFV 180 Y+IR+ VF++VL DL FFE G GVS+GDIAYRITAEASDVADTVY+L+N+++PS LQ Sbjct: 159 YEIRLRVFERVLAMDLDFFEGGTGVSSGDIAYRITAEASDVADTVYSLLNTVVPSMLQLS 218 Query: 181 AMATQMVLLNPVLTLISALVIPCISLVIAHLGETLRQISNEAHLTVAKLSEYLNEVLPSM 360 AMATQM+ ++PVL+LISALVIPC++LVIA+LGE +IS A L++A LS YLNEVLP+ Sbjct: 219 AMATQMLAISPVLSLISALVIPCVALVIAYLGERQHRISKMASLSIANLSSYLNEVLPAF 278 Query: 361 LFVKASNAELCECSRFQRLAHADLSKNLRK 450 LFVKA++AE CE RFQRLA DL + L+K Sbjct: 279 LFVKANSAEFCENIRFQRLARTDLYERLKK 308