BLASTX nr result

ID: Coptis24_contig00009177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009177
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322299.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26
ref|XP_002284518.1| PREDICTED: ATP-dependent Clp protease ATP-bi...   121   7e-26
ref|XP_001756645.1| predicted protein [Physcomitrella patens sub...   121   7e-26
ref|XP_001766010.1| predicted protein [Physcomitrella patens sub...   121   7e-26
ref|XP_001779162.1| predicted protein [Physcomitrella patens sub...   121   7e-26

>ref|XP_002322299.1| predicted protein [Populus trichocarpa] gi|222869295|gb|EEF06426.1|
            predicted protein [Populus trichocarpa]
          Length = 932

 Score =  122 bits (306), Expect = 3e-26
 Identities = 61/70 (87%), Positives = 66/70 (94%)
 Frame = +1

Query: 1    KLEVKDIADIMLKEVFERLKAKEIELQATDRFRDRVVDEGYSPSYGVRPLRRAIMRLLED 180
            KLEVKDIADIMLKEVFERLKAKEIELQ T+RFRDRVVDEGY+P+YG RPLRRAIMRLLED
Sbjct: 825  KLEVKDIADIMLKEVFERLKAKEIELQVTERFRDRVVDEGYNPAYGARPLRRAIMRLLED 884

Query: 181  NMAEKMPSGD 210
            +MAEKM S +
Sbjct: 885  SMAEKMLSAE 894


>ref|XP_002284518.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpA
            homolog CD4A, chloroplastic-like [Vitis vinifera]
          Length = 923

 Score =  121 bits (303), Expect = 7e-26
 Identities = 60/66 (90%), Positives = 64/66 (96%)
 Frame = +1

Query: 1    KLEVKDIADIMLKEVFERLKAKEIELQATDRFRDRVVDEGYSPSYGVRPLRRAIMRLLED 180
            KLEVKDIADIMLKEVFERLKAK+IELQ T+RFRDRVVDEGY+PSYG RPLRRAIMRLLED
Sbjct: 817  KLEVKDIADIMLKEVFERLKAKDIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLED 876

Query: 181  NMAEKM 198
            +MAEKM
Sbjct: 877  SMAEKM 882


>ref|XP_001756645.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162692241|gb|EDQ78599.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 933

 Score =  121 bits (303), Expect = 7e-26
 Identities = 60/70 (85%), Positives = 66/70 (94%)
 Frame = +1

Query: 1    KLEVKDIADIMLKEVFERLKAKEIELQATDRFRDRVVDEGYSPSYGVRPLRRAIMRLLED 180
            KLEVK+IADIMLKEVFERLK KEI+LQ T+RFRDRVVDEGYSPSYG RPLRRAIMRLLED
Sbjct: 824  KLEVKEIADIMLKEVFERLKKKEIDLQVTERFRDRVVDEGYSPSYGARPLRRAIMRLLED 883

Query: 181  NMAEKMPSGD 210
            +MAE+M SG+
Sbjct: 884  SMAERMLSGE 893


>ref|XP_001766010.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162682653|gb|EDQ69069.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 836

 Score =  121 bits (303), Expect = 7e-26
 Identities = 60/70 (85%), Positives = 66/70 (94%)
 Frame = +1

Query: 1   KLEVKDIADIMLKEVFERLKAKEIELQATDRFRDRVVDEGYSPSYGVRPLRRAIMRLLED 180
           KLEVK+IADIMLKEVFERLK KEI+LQ T+RFRDRVVDEGYSPSYG RPLRRAIMRLLED
Sbjct: 727 KLEVKEIADIMLKEVFERLKKKEIDLQVTERFRDRVVDEGYSPSYGARPLRRAIMRLLED 786

Query: 181 NMAEKMPSGD 210
           +MAE+M SG+
Sbjct: 787 SMAERMLSGE 796


>ref|XP_001779162.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162669421|gb|EDQ56008.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 922

 Score =  121 bits (303), Expect = 7e-26
 Identities = 60/70 (85%), Positives = 66/70 (94%)
 Frame = +1

Query: 1    KLEVKDIADIMLKEVFERLKAKEIELQATDRFRDRVVDEGYSPSYGVRPLRRAIMRLLED 180
            KLEVK+IADIMLKEVFERLK KEI+LQ T+RFRDRVVDEGYSPSYG RPLRRAIMRLLED
Sbjct: 827  KLEVKEIADIMLKEVFERLKKKEIDLQVTERFRDRVVDEGYSPSYGARPLRRAIMRLLED 886

Query: 181  NMAEKMPSGD 210
            +MAE+M SG+
Sbjct: 887  SMAERMLSGE 896


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