BLASTX nr result

ID: Coptis24_contig00009176 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009176
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAH10642.1| homogentisate geranylgeranyl transferase [Hevea ...   164   5e-39
gb|ACB42448.1| homogentisate geranylgeranyl transferase [Angelic...   163   1e-38
ref|XP_002324898.1| predicted protein [Populus trichocarpa] gi|2...   161   6e-38
ref|XP_002282953.2| PREDICTED: probable homogentisate phytyltran...   156   1e-36
emb|CBI21093.3| unnamed protein product [Vitis vinifera]              156   1e-36

>dbj|BAH10642.1| homogentisate geranylgeranyl transferase [Hevea brasiliensis]
          Length = 411

 Score =  164 bits (416), Expect = 5e-39
 Identities = 77/138 (55%), Positives = 101/138 (73%)
 Frame = -1

Query: 416 NKPYLPLVSGEMSLQTGAAIVAITSFIAIVMGIMIQSPPLLSVILFFFFFGGAYSINLPF 237
           NKPYLPL SG+ S+ TG  IV+ +  +++ MGI  QSPPLL+ +L  F  G  YSI LPF
Sbjct: 183 NKPYLPLASGKFSMATGILIVSASLLLSLYMGITFQSPPLLAALLISFALGSVYSIELPF 242

Query: 236 LRWKNNAFLAASCIMFLKGLVFQIGIFVHIQKYVLGKPIAFTRSLVFAATFMSMFSVALA 57
           LRWK +AFLAASCI+ ++ +V Q+  FVHIQK+VLGK I   RSL+FA  FM  FS A+A
Sbjct: 243 LRWKKHAFLAASCILIVRAMVVQLAFFVHIQKFVLGKSIFIPRSLMFATAFMCFFSAAIA 302

Query: 56  ILKDIPDHDGDKAFGVKS 3
           + KDIPD +GD+ +G++S
Sbjct: 303 LFKDIPDVEGDRDYGIQS 320


>gb|ACB42448.1| homogentisate geranylgeranyl transferase [Angelica gigas]
          Length = 317

 Score =  163 bits (413), Expect = 1e-38
 Identities = 74/138 (53%), Positives = 103/138 (74%)
 Frame = -1

Query: 416 NKPYLPLVSGEMSLQTGAAIVAITSFIAIVMGIMIQSPPLLSVILFFFFFGGAYSINLPF 237
           NKP LP+ SGE S++TG AIV+    ++I+MGIM QSPP+L  +L  FFFG AYSI++P 
Sbjct: 91  NKPNLPIASGEYSMETGKAIVSAFGLMSIIMGIMFQSPPVLYCLLVCFFFGTAYSIDVPL 150

Query: 236 LRWKNNAFLAASCIMFLKGLVFQIGIFVHIQKYVLGKPIAFTRSLVFAATFMSMFSVALA 57
            RWK NAFLAA CI+ ++ +  Q+ +F HIQ+YVLG+P+ F+RSL FA   M++F   +A
Sbjct: 151 FRWKKNAFLAAMCIVIVRAITVQLTVFYHIQQYVLGRPVLFSRSLAFAIICMTLFVTVIA 210

Query: 56  ILKDIPDHDGDKAFGVKS 3
           + KDIPD DGD+ FG+++
Sbjct: 211 LFKDIPDVDGDRDFGIQT 228


>ref|XP_002324898.1| predicted protein [Populus trichocarpa] gi|222866332|gb|EEF03463.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  161 bits (407), Expect = 6e-38
 Identities = 77/138 (55%), Positives = 96/138 (69%)
 Frame = -1

Query: 416 NKPYLPLVSGEMSLQTGAAIVAITSFIAIVMGIMIQSPPLLSVILFFFFFGGAYSINLPF 237
           NKPYLPL SG+ S+ TG AIV+ +   +  MGIM QSP L S +L     G  YSI LPF
Sbjct: 71  NKPYLPLASGDFSMGTGVAIVSASLLASFAMGIMFQSPLLFSALLISCVLGSVYSIELPF 130

Query: 236 LRWKNNAFLAASCIMFLKGLVFQIGIFVHIQKYVLGKPIAFTRSLVFAATFMSMFSVALA 57
           LRWK  AFLAA+CIM ++ +V Q+  FVH+QK+VLGK    TRSLVFA  FM  FS  +A
Sbjct: 131 LRWKKQAFLAATCIMIVRAIVVQLAFFVHMQKFVLGKTTVVTRSLVFATAFMCFFSAVIA 190

Query: 56  ILKDIPDHDGDKAFGVKS 3
           + KDIPD DGD+ +G++S
Sbjct: 191 LFKDIPDVDGDRDYGIQS 208


>ref|XP_002282953.2| PREDICTED: probable homogentisate phytyltransferase 1,
           chloroplastic-like [Vitis vinifera]
          Length = 397

 Score =  156 bits (395), Expect = 1e-36
 Identities = 72/138 (52%), Positives = 97/138 (70%)
 Frame = -1

Query: 416 NKPYLPLVSGEMSLQTGAAIVAITSFIAIVMGIMIQSPPLLSVILFFFFFGGAYSINLPF 237
           NKP LPL SG+ S++TG+ IV I+  +++ MGIM QSPPL   +L  F  G AYSI +P 
Sbjct: 171 NKPELPLASGDFSMETGSQIVFISLLMSVGMGIMFQSPPLFCALLISFLLGTAYSIEIPL 230

Query: 236 LRWKNNAFLAASCIMFLKGLVFQIGIFVHIQKYVLGKPIAFTRSLVFAATFMSMFSVALA 57
           LRWK    LAASCI+ ++ +V Q+  F HIQK+VLG+ I +T+S+VF   FM  FS  +A
Sbjct: 231 LRWKRYPLLAASCILIVRAIVVQLAFFAHIQKHVLGRSIVYTKSVVFGVAFMCFFSTVIA 290

Query: 56  ILKDIPDHDGDKAFGVKS 3
           + KDIPD DGD+ FG++S
Sbjct: 291 LFKDIPDVDGDREFGIQS 308


>emb|CBI21093.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score =  156 bits (395), Expect = 1e-36
 Identities = 72/138 (52%), Positives = 97/138 (70%)
 Frame = -1

Query: 416 NKPYLPLVSGEMSLQTGAAIVAITSFIAIVMGIMIQSPPLLSVILFFFFFGGAYSINLPF 237
           NKP LPL SG+ S++TG+ IV I+  +++ MGIM QSPPL   +L  F  G AYSI +P 
Sbjct: 147 NKPELPLASGDFSMETGSQIVFISLLMSVGMGIMFQSPPLFCALLISFLLGTAYSIEIPL 206

Query: 236 LRWKNNAFLAASCIMFLKGLVFQIGIFVHIQKYVLGKPIAFTRSLVFAATFMSMFSVALA 57
           LRWK    LAASCI+ ++ +V Q+  F HIQK+VLG+ I +T+S+VF   FM  FS  +A
Sbjct: 207 LRWKRYPLLAASCILIVRAIVVQLAFFAHIQKHVLGRSIVYTKSVVFGVAFMCFFSTVIA 266

Query: 56  ILKDIPDHDGDKAFGVKS 3
           + KDIPD DGD+ FG++S
Sbjct: 267 LFKDIPDVDGDREFGIQS 284


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