BLASTX nr result
ID: Coptis24_contig00009173
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00009173 (798 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EAZ09809.1| hypothetical protein OsI_32097 [Oryza sativa Indi... 71 1e-14 gb|ABG73439.1| unknown protein [Oryza brachyantha] 71 3e-14 ref|NP_001063717.1| Os09g0525200 [Oryza sativa Japonica Group] g... 71 4e-14 ref|XP_002460547.1| hypothetical protein SORBIDRAFT_02g030390 [S... 70 5e-14 ref|XP_002282782.1| PREDICTED: ribosomal RNA processing protein ... 67 6e-14 >gb|EAZ09809.1| hypothetical protein OsI_32097 [Oryza sativa Indica Group] Length = 270 Score = 70.9 bits (172), Expect(2) = 1e-14 Identities = 36/51 (70%), Positives = 43/51 (84%), Gaps = 1/51 (1%) Frame = +1 Query: 166 YYLA-AEIRKRDLMKKFNSLKTAGAGKLEAFIEKKRRKNASKDHRYVPYRR 315 YYL +EIR+R LM K+N LK AG KL+AF+EK+RRKNASKDHRY+PYRR Sbjct: 217 YYLKKSEIRERKLMNKYNELKEAG--KLDAFMEKRRRKNASKDHRYMPYRR 265 Score = 35.0 bits (79), Expect(2) = 1e-14 Identities = 15/31 (48%), Positives = 21/31 (67%) Frame = +3 Query: 12 KHTADKAIVAEHMRSEREAAKEGKHLYHLKQ 104 K + I+ EH++ EREAAK GK Y+LK+ Sbjct: 191 KKNVESEILREHIKKEREAAKTGKRPYYLKK 221 >gb|ABG73439.1| unknown protein [Oryza brachyantha] Length = 281 Score = 70.9 bits (172), Expect(2) = 3e-14 Identities = 36/51 (70%), Positives = 43/51 (84%), Gaps = 1/51 (1%) Frame = +1 Query: 166 YYLA-AEIRKRDLMKKFNSLKTAGAGKLEAFIEKKRRKNASKDHRYVPYRR 315 YYL +EIR+R LM K+N LK AG KL+AF+EK+RRKNASKDHRY+PYRR Sbjct: 227 YYLKKSEIRERKLMNKYNELKEAG--KLDAFMEKRRRKNASKDHRYMPYRR 275 Score = 33.9 bits (76), Expect(2) = 3e-14 Identities = 14/31 (45%), Positives = 21/31 (67%) Frame = +3 Query: 12 KHTADKAIVAEHMRSEREAAKEGKHLYHLKQ 104 + + I+ EH++ EREAAK GK Y+LK+ Sbjct: 201 RKNVESEILREHIKKEREAAKTGKQPYYLKK 231 >ref|NP_001063717.1| Os09g0525200 [Oryza sativa Japonica Group] gi|52076037|dbj|BAD46490.1| unknown protein [Oryza sativa Japonica Group] gi|113631950|dbj|BAF25631.1| Os09g0525200 [Oryza sativa Japonica Group] gi|215704225|dbj|BAG93065.1| unnamed protein product [Oryza sativa Japonica Group] gi|222641940|gb|EEE70072.1| hypothetical protein OsJ_30058 [Oryza sativa Japonica Group] Length = 270 Score = 70.9 bits (172), Expect(2) = 4e-14 Identities = 36/51 (70%), Positives = 43/51 (84%), Gaps = 1/51 (1%) Frame = +1 Query: 166 YYLA-AEIRKRDLMKKFNSLKTAGAGKLEAFIEKKRRKNASKDHRYVPYRR 315 YYL +EIR+R LM K+N LK AG KL+AF+EK+RRKNASKDHRY+PYRR Sbjct: 217 YYLKKSEIRERKLMNKYNELKEAG--KLDAFMEKRRRKNASKDHRYMPYRR 265 Score = 33.5 bits (75), Expect(2) = 4e-14 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = +3 Query: 12 KHTADKAIVAEHMRSEREAAKEGKHLYHLKQ 104 K + I+ EH++ EREA K GK Y+LK+ Sbjct: 191 KKNVESEILREHIKKEREATKTGKRPYYLKK 221 >ref|XP_002460547.1| hypothetical protein SORBIDRAFT_02g030390 [Sorghum bicolor] gi|241923924|gb|EER97068.1| hypothetical protein SORBIDRAFT_02g030390 [Sorghum bicolor] Length = 274 Score = 70.1 bits (170), Expect(2) = 5e-14 Identities = 35/51 (68%), Positives = 43/51 (84%), Gaps = 1/51 (1%) Frame = +1 Query: 166 YYLA-AEIRKRDLMKKFNSLKTAGAGKLEAFIEKKRRKNASKDHRYVPYRR 315 YYL +E+R+R LM K+N LK AG KL+AFIE++RRKNASKDHRY+PYRR Sbjct: 221 YYLKKSELRERKLMNKYNELKEAG--KLDAFIERRRRKNASKDHRYMPYRR 269 Score = 33.9 bits (76), Expect(2) = 5e-14 Identities = 14/27 (51%), Positives = 20/27 (74%) Frame = +3 Query: 24 DKAIVAEHMRSEREAAKEGKHLYHLKQ 104 + I+ EH++ EREAAK GK Y+LK+ Sbjct: 199 ESEILREHIKKEREAAKSGKRPYYLKK 225 >ref|XP_002282782.1| PREDICTED: ribosomal RNA processing protein 36 homolog [Vitis vinifera] gi|297742597|emb|CBI34746.3| unnamed protein product [Vitis vinifera] Length = 236 Score = 66.6 bits (161), Expect(2) = 6e-14 Identities = 32/50 (64%), Positives = 42/50 (84%) Frame = +1 Query: 166 YYLAAEIRKRDLMKKFNSLKTAGAGKLEAFIEKKRRKNASKDHRYVPYRR 315 Y +EIRK+ ++K+NSLK +G KLE+FIEK+RR+NASKDHRY+PYRR Sbjct: 184 YIKKSEIRKQRNIEKYNSLKASG--KLESFIEKRRRRNASKDHRYMPYRR 231 Score = 37.0 bits (84), Expect(2) = 6e-14 Identities = 17/34 (50%), Positives = 24/34 (70%) Frame = +3 Query: 3 GPSKHTADKAIVAEHMRSEREAAKEGKHLYHLKQ 104 G KHT D I+AEH + EREA K+GK +++K+ Sbjct: 155 GSVKHT-DSKILAEHKKKEREATKQGKRPFYIKK 187