BLASTX nr result

ID: Coptis24_contig00009159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009159
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522779.1| cellulose synthase, putative [Ricinus commun...   158   4e-37
ref|XP_002266196.2| PREDICTED: cellulose synthase-like protein E...   154   7e-36
emb|CBI39755.3| unnamed protein product [Vitis vinifera]              154   7e-36
ref|XP_003635559.1| PREDICTED: cellulose synthase-like protein E...   149   2e-34
emb|CBI29575.3| unnamed protein product [Vitis vinifera]              149   2e-34

>ref|XP_002522779.1| cellulose synthase, putative [Ricinus communis]
           gi|223538017|gb|EEF39630.1| cellulose synthase, putative
           [Ricinus communis]
          Length = 728

 Score =  158 bits (400), Expect = 4e-37
 Identities = 85/149 (57%), Positives = 96/149 (64%), Gaps = 3/149 (2%)
 Frame = +3

Query: 3   KLGRIPEDIRIKHKGFSEWDSVSSPRDHQTILQVLIDRRNPSAVDIEGGSMPTLVYLARE 182
           KLGRIPE+ R KHKGFS+WDS SS RDH TILQ+LID R+P+A D++G ++PTLVYLARE
Sbjct: 213 KLGRIPEEARRKHKGFSQWDSYSSQRDHDTILQILIDGRDPNATDVDGCALPTLVYLARE 272

Query: 183 KRPNHPHNFKAGAMNALIRVSSKI---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 353
           KRP +PHNFKAGAMNALIRVSS I                                    
Sbjct: 273 KRPQNPHNFKAGAMNALIRVSSAISNGEIILNLDCDMYSNNSKSVQDALCFFMDEEKSHD 332

Query: 354 XAFVQFPQCFINITKNDIYGGSLTVITKV 440
            AFVQFPQ F NITKND+YG SL VI  V
Sbjct: 333 IAFVQFPQSFANITKNDLYGSSLKVIANV 361


>ref|XP_002266196.2| PREDICTED: cellulose synthase-like protein E1 [Vitis vinifera]
          Length = 922

 Score =  154 bits (389), Expect = 7e-36
 Identities = 84/165 (50%), Positives = 100/165 (60%), Gaps = 3/165 (1%)
 Frame = +3

Query: 3   KLGRIPEDIRIKHKGFSEWDSVSSPRDHQTILQVLIDRRNPSAVDIEGGSMPTLVYLARE 182
           KLGRIPE++ ++ KGFS+WDS SS  DH TILQ+LID R+P+A+D+EG  +PTLVYLARE
Sbjct: 210 KLGRIPEEVLMEQKGFSQWDSFSSRHDHDTILQILIDGRDPNAMDVEGSKLPTLVYLARE 269

Query: 183 KRPNHPHNFKAGAMNALIRVSSKI---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 353
           KRP HPHNFKAGAMNALIRVSSKI                                    
Sbjct: 270 KRPKHPHNFKAGAMNALIRVSSKISNGAIILNVDCDMYSNNSHSIRDALCFFMDEEKGQE 329

Query: 354 XAFVQFPQCFINITKNDIYGGSLTVITKVXXXXXXXXXXXXXIGT 488
            AFVQ+PQ F NITKN++Y  SL VI++V             IGT
Sbjct: 330 IAFVQYPQNFQNITKNELYSSSLRVISEVEFHGLDGYGGPMYIGT 374


>emb|CBI39755.3| unnamed protein product [Vitis vinifera]
          Length = 710

 Score =  154 bits (389), Expect = 7e-36
 Identities = 84/165 (50%), Positives = 100/165 (60%), Gaps = 3/165 (1%)
 Frame = +3

Query: 3   KLGRIPEDIRIKHKGFSEWDSVSSPRDHQTILQVLIDRRNPSAVDIEGGSMPTLVYLARE 182
           KLGRIPE++ ++ KGFS+WDS SS  DH TILQ+LID R+P+A+D+EG  +PTLVYLARE
Sbjct: 188 KLGRIPEEVLMEQKGFSQWDSFSSRHDHDTILQILIDGRDPNAMDVEGSKLPTLVYLARE 247

Query: 183 KRPNHPHNFKAGAMNALIRVSSKI---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 353
           KRP HPHNFKAGAMNALIRVSSKI                                    
Sbjct: 248 KRPKHPHNFKAGAMNALIRVSSKISNGAIILNVDCDMYSNNSHSIRDALCFFMDEEKGQE 307

Query: 354 XAFVQFPQCFINITKNDIYGGSLTVITKVXXXXXXXXXXXXXIGT 488
            AFVQ+PQ F NITKN++Y  SL VI++V             IGT
Sbjct: 308 IAFVQYPQNFQNITKNELYSSSLRVISEVEFHGLDGYGGPMYIGT 352


>ref|XP_003635559.1| PREDICTED: cellulose synthase-like protein E6-like [Vitis vinifera]
          Length = 734

 Score =  149 bits (376), Expect = 2e-34
 Identities = 82/165 (49%), Positives = 98/165 (59%), Gaps = 3/165 (1%)
 Frame = +3

Query: 3   KLGRIPEDIRIKHKGFSEWDSVSSPRDHQTILQVLIDRRNPSAVDIEGGSMPTLVYLARE 182
           K+G+I E+IR +HKGF EWD VS PR+HQTILQ+LID R+  A+D+EG  +PTLVYL+RE
Sbjct: 214 KVGQISEEIRKQHKGFGEWDLVSDPRNHQTILQILIDGRDGKAMDVEGQPLPTLVYLSRE 273

Query: 183 KRPNHPHNFKAGAMNALIRVSSKI---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 353
           KRP + HNFKAGAMNALIRVSS+I                                    
Sbjct: 274 KRPKYAHNFKAGAMNALIRVSSRISNCEIILNVDCDMYSNNSESVKDALCFLMDEETGRE 333

Query: 354 XAFVQFPQCFINITKNDIYGGSLTVITKVXXXXXXXXXXXXXIGT 488
            A+VQFPQCF NITKND+Y  SL VI +V             IGT
Sbjct: 334 IAYVQFPQCFNNITKNDLYASSLNVIMEVELAGFDSHGGPCYIGT 378


>emb|CBI29575.3| unnamed protein product [Vitis vinifera]
          Length = 1035

 Score =  149 bits (376), Expect = 2e-34
 Identities = 82/165 (49%), Positives = 98/165 (59%), Gaps = 3/165 (1%)
 Frame = +3

Query: 3   KLGRIPEDIRIKHKGFSEWDSVSSPRDHQTILQVLIDRRNPSAVDIEGGSMPTLVYLARE 182
           K+G+I E+IR +HKGF EWD VS PR+HQTILQ+LID R+  A+D+EG  +PTLVYL+RE
Sbjct: 214 KVGQISEEIRKQHKGFGEWDLVSDPRNHQTILQILIDGRDGKAMDVEGQPLPTLVYLSRE 273

Query: 183 KRPNHPHNFKAGAMNALIRVSSKI---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 353
           KRP + HNFKAGAMNALIRVSS+I                                    
Sbjct: 274 KRPKYAHNFKAGAMNALIRVSSRISNCEIILNVDCDMYSNNSESVKDALCFLMDEETGRE 333

Query: 354 XAFVQFPQCFINITKNDIYGGSLTVITKVXXXXXXXXXXXXXIGT 488
            A+VQFPQCF NITKND+Y  SL VI +V             IGT
Sbjct: 334 IAYVQFPQCFNNITKNDLYASSLNVIMEVELAGFDSHGGPCYIGT 378



 Score =  108 bits (269), Expect = 6e-22
 Identities = 50/78 (64%), Positives = 64/78 (82%)
 Frame = +3

Query: 6    LGRIPEDIRIKHKGFSEWDSVSSPRDHQTILQVLIDRRNPSAVDIEGGSMPTLVYLAREK 185
            +G+I E+IR +H+GF EW+  S P++HQTILQ+LID ++  AVD EG  +PTLVYL+REK
Sbjct: 954  MGQITEEIRKQHQGFGEWNLASEPQNHQTILQILIDGKDGKAVDEEGQPLPTLVYLSREK 1013

Query: 186  RPNHPHNFKAGAMNALIR 239
            RP + HNFKAGAMNALIR
Sbjct: 1014 RPKYHHNFKAGAMNALIR 1031


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