BLASTX nr result

ID: Coptis24_contig00009156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009156
         (1480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277851.2| PREDICTED: uncharacterized protein LOC100259...   287   4e-75
emb|CBI30220.3| unnamed protein product [Vitis vinifera]              280   7e-73
ref|XP_002326236.1| predicted protein [Populus trichocarpa] gi|2...   272   2e-70
ref|XP_002528638.1| conserved hypothetical protein [Ricinus comm...   271   4e-70
ref|NP_001242801.1| uncharacterized protein LOC100808934 [Glycin...   256   8e-66

>ref|XP_002277851.2| PREDICTED: uncharacterized protein LOC100259589 [Vitis vinifera]
          Length = 470

 Score =  287 bits (735), Expect = 4e-75
 Identities = 153/229 (66%), Positives = 170/229 (74%), Gaps = 4/229 (1%)
 Frame = +2

Query: 488  MVSFTAHDTNHNTHPPQYVKSTYPTCTTKAKQPQQQQMAFSDEDEPGCTAXXXXXXXXXX 667
            MV+F   D +H++   Q VK  YP   TKAKQ    Q+  SDEDEPG T           
Sbjct: 30   MVAFAHPDPDHHSQSQQPVKHGYPY-VTKAKQ----QLTLSDEDEPGLTGDDSTADGKRK 84

Query: 668  XXPWHRVKWTDNMVRLLIMVVFYIGDDACPEGNETQGMSKKKSGAMLQKKGKWKSVSKAM 847
              PWHR+KWTDNMVRLLIM VFYIGD+   E ++    +KKK+G +LQKKGKWKSVS+AM
Sbjct: 85   VSPWHRMKWTDNMVRLLIMAVFYIGDEGGSECSDPS--AKKKTGGLLQKKGKWKSVSRAM 142

Query: 848  MEKGFSVSPQQCEDKFNDLNKRYKRVNDILGKGTACKVVENQSLLDTMDQLSPKMKDEAR 1027
            MEKGF VSPQQCEDKFNDLNKRYKRVNDILGKGTAC+VVENQSLLDTMDQLSPKMKDE R
Sbjct: 143  MEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQSLLDTMDQLSPKMKDEVR 202

Query: 1028 KLLNSKHLFFREMCAYHNS---GGAVGAHQS-CEGAIEITRHQQQGCSH 1162
            KLLNSKHLFFREMCAYHNS   GG  GAH S  + A+E  +HQQQ   H
Sbjct: 203  KLLNSKHLFFREMCAYHNSCGGGGTSGAHPSPPDTAVEPPQHQQQQQQH 251


>emb|CBI30220.3| unnamed protein product [Vitis vinifera]
          Length = 410

 Score =  280 bits (716), Expect = 7e-73
 Identities = 154/249 (61%), Positives = 168/249 (67%), Gaps = 3/249 (1%)
 Frame = +2

Query: 374  MLGLEMPLHSLXXXXXXXXXXXXXXXXXXXXXXXXXXXMVSFTAHDTNHNTHPPQYVKST 553
            MLGLEMPL                              MV+F   D +H++   Q VK  
Sbjct: 1    MLGLEMPLQQ----PQQQQNPQNPHHTHHHTHLQQHPQMVAFAHPDPDHHSQSQQPVKHG 56

Query: 554  YPTCTTKAKQPQQQQMAFSDEDEPGCTAXXXXXXXXXXXXPWHRVKWTDNMVRLLIMVVF 733
            YP   TKAKQ    Q+  SDEDEPG T             PWHR+KWTDNMVRLLIM VF
Sbjct: 57   YPY-VTKAKQ----QLTLSDEDEPGLTGDDSTADGKRKVSPWHRMKWTDNMVRLLIMAVF 111

Query: 734  YIGDDACPEGNETQGMSKKKSGAMLQKKGKWKSVSKAMMEKGFSVSPQQCEDKFNDLNKR 913
            YIGD+   E ++    +KKK+G +LQKKGKWKSVS+AMMEKGF VSPQQCEDKFNDLNKR
Sbjct: 112  YIGDEGGSECSDPS--AKKKTGGLLQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKR 169

Query: 914  YKRVNDILGKGTACKVVENQSLLDTMDQLSPKMKDEARKLLNSKHLFFREMCAYHNS--- 1084
            YKRVNDILGKGTAC+VVENQSLLDTMDQLSPKMKDE RKLLNSKHLFFREMCAYHNS   
Sbjct: 170  YKRVNDILGKGTACRVVENQSLLDTMDQLSPKMKDEVRKLLNSKHLFFREMCAYHNSCGG 229

Query: 1085 GGAVGAHQS 1111
            GG  GAH S
Sbjct: 230  GGTSGAHPS 238


>ref|XP_002326236.1| predicted protein [Populus trichocarpa] gi|222833429|gb|EEE71906.1|
            predicted protein [Populus trichocarpa]
          Length = 483

 Score =  272 bits (695), Expect = 2e-70
 Identities = 152/291 (52%), Positives = 177/291 (60%), Gaps = 14/291 (4%)
 Frame = +2

Query: 368  AGMLGLEMPLHSLXXXXXXXXXXXXXXXXXXXXXXXXXXXMVSFTAHDTNHNTHPPQYVK 547
            +G+LGLE+PLH                             +V++  H+++H+ H  Q  K
Sbjct: 3    SGILGLELPLHQ--------------QQNPQNPHHLQHPQIVAYAHHESDHHQHSQQSAK 48

Query: 548  STYPTCTTKAKQPQQQQMAFSDEDEPGCTAXXXXXXXXXXXXPWHRVKWTDNMVRLLIMV 727
              YP  +TK KQ        S+EDEP  T             PW R+KWTDNMVRLLIM 
Sbjct: 49   HAYPFASTKPKQLSP----LSNEDEPSFTGDDSTTDGNRKISPWQRMKWTDNMVRLLIMA 104

Query: 728  VFYIGDDACPEGNETQGMSKKKSGAMLQKKGKWKSVSKAMMEKGFSVSPQQCEDKFNDLN 907
            VFYIGD+   E ++  G  KKK G + QKKGKWKSVS+AMMEKGF VSPQQCEDKFNDLN
Sbjct: 105  VFYIGDEVGSEVSDPIG--KKKPGGLAQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLN 162

Query: 908  KRYKRVNDILGKGTACKVVENQSLLDTMDQLSPKMKDEARKLLNSKHLFFREMCAYHNSG 1087
            KRYKRVNDILGKGTAC+VVENQSLLDTMD LSPKMKDE RKLLNSKHLFFREMCAYHNS 
Sbjct: 163  KRYKRVNDILGKGTACRVVENQSLLDTMD-LSPKMKDEVRKLLNSKHLFFREMCAYHNSC 221

Query: 1088 GAVGAHQSCEGAIEI------TRHQQ--------QGCSHPSDGVQTANSRR 1198
            G  G       + E+       +HQQ        Q CSH ++  Q   + R
Sbjct: 222  GHAGVASGINNSPEMATDPSHAQHQQATQQQQQYQRCSHSTENAQVVTNSR 272


>ref|XP_002528638.1| conserved hypothetical protein [Ricinus communis]
            gi|223531927|gb|EEF33741.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 499

 Score =  271 bits (692), Expect = 4e-70
 Identities = 158/297 (53%), Positives = 183/297 (61%), Gaps = 16/297 (5%)
 Frame = +2

Query: 356  NGVKAGMLGLEMPLHSLXXXXXXXXXXXXXXXXXXXXXXXXXXXMVSFTA-HDTNHNTHP 532
            +G+ +G+LGLEMPLH                             MV++   H+++HN   
Sbjct: 12   SGMGSGLLGLEMPLHQ------QQQQQQQNPQNPQNTHQIHHPQMVAYAHNHESDHNPQS 65

Query: 533  PQYVKSTYPTCTTKAKQPQQQQMAFSDEDEPGCTAXXXXXXXXXXXXPWHRVKWTDNMVR 712
             Q VK  Y   ++   +PQ      SDEDEPG T             PW R+KWTD+MVR
Sbjct: 66   QQSVKHAYNPYSSLNPKPQSP---LSDEDEPGFTGDDSTGDGKRKVSPWQRMKWTDSMVR 122

Query: 713  LLIMVVFYIGDDACPEGNETQGMSKKKSGAML-QKKGKWKSVSKAMMEKGFSVSPQQCED 889
            LLIM VFYIGD+A  EGN      KKK+G  L QKKGKWKSVS+AMMEKGF VSPQQCED
Sbjct: 123  LLIMAVFYIGDEAGSEGNNDPSTGKKKAGGGLSQKKGKWKSVSRAMMEKGFYVSPQQCED 182

Query: 890  KFNDLNKRYKRVNDILGKGTACKVVENQSLLDTMDQLSPKMKDEARKLLNSKHLFFREMC 1069
            KFNDLNKRYKRVNDILGKGTACKVVENQSLL+TMD LSPKMK+E +KLLNSKHLFFREMC
Sbjct: 183  KFNDLNKRYKRVNDILGKGTACKVVENQSLLETMD-LSPKMKEEVKKLLNSKHLFFREMC 241

Query: 1070 AYHNSGG------AVGAHQSCEGAI--------EITRHQQQGCSHPSDGVQTANSRR 1198
            AYHNS G      A G + S E A         + +  QQQ CSH ++  Q A   R
Sbjct: 242  AYHNSCGHGSNGIASGTNHSPEIATDQSHPQHQQASHLQQQRCSHSTENAQFATISR 298


>ref|NP_001242801.1| uncharacterized protein LOC100808934 [Glycine max]
            gi|255642557|gb|ACU21542.1| unknown [Glycine max]
          Length = 455

 Score =  256 bits (655), Expect = 8e-66
 Identities = 141/242 (58%), Positives = 163/242 (67%), Gaps = 14/242 (5%)
 Frame = +2

Query: 488  MVSFTAH---DTNHNTHPPQY-VKSTYPTCTTKAKQPQQQQMAFSDEDEPGCTAXXXXXX 655
            MVS+T +   DT+H   PPQ  +K  Y    TK+ +    Q+  SDEDEP  TA      
Sbjct: 45   MVSYTTNHDTDTHHQQPPPQQSIKHGYNFSATKSNK---SQITLSDEDEPVFTAEDNSSG 101

Query: 656  XXXXXX-PWHRVKWTDNMVRLLIMVVFYIGDDACPEGNETQGMSKKKSGAMLQKKGKWKS 832
                   PWHR+KWTD MV+ LIM V+YIGD+A  EG +    +KKK+  +LQKKGKWKS
Sbjct: 102  DPKRKVSPWHRMKWTDTMVKFLIMAVYYIGDEAGSEGTDP---TKKKASGLLQKKGKWKS 158

Query: 833  VSKAMMEKGFSVSPQQCEDKFNDLNKRYKRVNDILGKGTACKVVENQSLLDTMDQLSPKM 1012
            VS  MMEKG+ VSPQQCEDKFNDLNKRYKRVNDILGKGTAC+VVENQ+LLDTMD LSPKM
Sbjct: 159  VSGGMMEKGYYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQTLLDTMD-LSPKM 217

Query: 1013 KDEARKLLNSKHLFFREMCAYHNS---------GGAVGAHQSCEGAIEITRHQQQGCSHP 1165
            K+E RKLLNSKHLFFREMCAYHNS         G      QS +  +    HQQQ C H 
Sbjct: 218  KEEVRKLLNSKHLFFREMCAYHNSCGHNNNNNCGSTSNVQQSTDQPLHQHNHQQQQCLHS 277

Query: 1166 SD 1171
            S+
Sbjct: 278  SE 279


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