BLASTX nr result

ID: Coptis24_contig00009155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009155
         (721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314262.1| predicted protein [Populus trichocarpa] gi|1...   135   6e-30
ref|XP_003539734.1| PREDICTED: uncharacterized protein LOC100798...   130   4e-28
ref|XP_002526335.1| conserved hypothetical protein [Ricinus comm...   129   5e-28
gb|AFK38592.1| unknown [Medicago truncatula]                          128   1e-27
ref|XP_003606498.1| hypothetical protein MTR_4g061010 [Medicago ...   128   1e-27

>ref|XP_002314262.1| predicted protein [Populus trichocarpa] gi|118487628|gb|ABK95639.1|
           unknown [Populus trichocarpa]
           gi|222850670|gb|EEE88217.1| predicted protein [Populus
           trichocarpa]
          Length = 284

 Score =  135 bits (341), Expect = 6e-30
 Identities = 62/100 (62%), Positives = 72/100 (72%), Gaps = 1/100 (1%)
 Frame = +1

Query: 4   YVNETLWDSGGGST-STDCQRWNNDQETLCYNCDSCKAGVLASLKKSWRKXXXXXXXXXX 180
           Y+NET W S GG   STDC  WNNDQE LCY+C+SCKAG+LA+L+KSWRK          
Sbjct: 185 YMNETFWSSSGGVVYSTDCNTWNNDQERLCYSCNSCKAGLLANLRKSWRKVSVINIVILI 244

Query: 181 XXXXXXXXGCAAFRNNKRMDNDEPYGESRMTKSQPSQFHL 300
                   GCAAFRNN+R+DNDEPYGE+RMTKSQPS+ HL
Sbjct: 245 ILVIAYVVGCAAFRNNRRIDNDEPYGEARMTKSQPSRIHL 284


>ref|XP_003539734.1| PREDICTED: uncharacterized protein LOC100798336 [Glycine max]
          Length = 285

 Score =  130 bits (326), Expect = 4e-28
 Identities = 62/102 (60%), Positives = 70/102 (68%), Gaps = 2/102 (1%)
 Frame = +1

Query: 1   VYVNETLWDSGGG--STSTDCQRWNNDQETLCYNCDSCKAGVLASLKKSWRKXXXXXXXX 174
           VY NET+W  G G   T+ DC RW+NDQE LCY CDSCKAGVLASLKKSWRK        
Sbjct: 184 VYQNETVWIPGSGLMGTNADCTRWSNDQEQLCYACDSCKAGVLASLKKSWRKVSVINIVV 243

Query: 175 XXXXXXXXXXGCAAFRNNKRMDNDEPYGESRMTKSQPSQFHL 300
                       AA+RNN++MDNDEPYGE+RMTK+QPS FHL
Sbjct: 244 MIILVIVYIIAYAAYRNNRKMDNDEPYGEARMTKAQPSAFHL 285


>ref|XP_002526335.1| conserved hypothetical protein [Ricinus communis]
           gi|223534294|gb|EEF36006.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 284

 Score =  129 bits (325), Expect = 5e-28
 Identities = 59/100 (59%), Positives = 71/100 (71%), Gaps = 1/100 (1%)
 Frame = +1

Query: 4   YVNETLWDSGGGST-STDCQRWNNDQETLCYNCDSCKAGVLASLKKSWRKXXXXXXXXXX 180
           YVNET+W S GG   + DC  W+NDQE LCY+C+SCKAGVL S++KSWRK          
Sbjct: 185 YVNETVWTSVGGVVYNPDCNNWSNDQEQLCYSCNSCKAGVLGSIRKSWRKVSVINIVILI 244

Query: 181 XXXXXXXXGCAAFRNNKRMDNDEPYGESRMTKSQPSQFHL 300
                   GCAAFRNN+R+DNDEPYGE+RMTK+QPS+ HL
Sbjct: 245 ILVIAYVIGCAAFRNNRRIDNDEPYGEARMTKAQPSRIHL 284


>gb|AFK38592.1| unknown [Medicago truncatula]
          Length = 285

 Score =  128 bits (322), Expect = 1e-27
 Identities = 60/102 (58%), Positives = 69/102 (67%), Gaps = 2/102 (1%)
 Frame = +1

Query: 1   VYVNETLWDSGGG--STSTDCQRWNNDQETLCYNCDSCKAGVLASLKKSWRKXXXXXXXX 174
           +Y NET+W  G G   T+ DC +WNNDQ+ LCY+CDSCKAGVL SLKKSWRK        
Sbjct: 184 LYQNETVWIQGAGLVGTNPDCNKWNNDQQQLCYDCDSCKAGVLGSLKKSWRKVSVINIVV 243

Query: 175 XXXXXXXXXXGCAAFRNNKRMDNDEPYGESRMTKSQPSQFHL 300
                        A+RNNK+MDNDEPYGE+RMTKSQPS FHL
Sbjct: 244 MIILVIVYIVAYYAYRNNKKMDNDEPYGEARMTKSQPSAFHL 285


>ref|XP_003606498.1| hypothetical protein MTR_4g061010 [Medicago truncatula]
           gi|355507553|gb|AES88695.1| hypothetical protein
           MTR_4g061010 [Medicago truncatula]
          Length = 285

 Score =  128 bits (322), Expect = 1e-27
 Identities = 60/102 (58%), Positives = 69/102 (67%), Gaps = 2/102 (1%)
 Frame = +1

Query: 1   VYVNETLWDSGGG--STSTDCQRWNNDQETLCYNCDSCKAGVLASLKKSWRKXXXXXXXX 174
           +Y NET+W  G G   T+ DC +WNNDQ+ LCY+CDSCKAGVL SLKKSWRK        
Sbjct: 184 LYQNETVWIQGAGLVGTNPDCNKWNNDQQQLCYDCDSCKAGVLGSLKKSWRKVSVINIVV 243

Query: 175 XXXXXXXXXXGCAAFRNNKRMDNDEPYGESRMTKSQPSQFHL 300
                        A+RNNK+MDNDEPYGE+RMTKSQPS FHL
Sbjct: 244 MIILVIVYIVAYYAYRNNKKMDNDEPYGEARMTKSQPSAFHL 285


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