BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009126
         (1353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30135.3| unnamed protein product [Vitis vinifera]              373   e-101
ref|XP_002308888.1| predicted protein [Populus trichocarpa] gi|2...   360   5e-97
ref|XP_003624990.1| Pentatricopeptide repeat-containing protein ...   353   6e-95
ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containi...   353   7e-95
ref|XP_003518031.1| PREDICTED: pentatricopeptide repeat-containi...   352   1e-94

>emb|CBI30135.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  373 bits (958), Expect = e-101
 Identities = 216/461 (46%), Positives = 276/461 (59%), Gaps = 27/461 (5%)
 Frame = +1

Query: 52   MWALRRTINPCR--GYHVGAFRACGVKLDTLTNDLDHAAETCNLTQFVPNGSLSVPKSFY 225
            MWALRR+ N  +  G+ +G  +AC  K + L+         C   Q + +  LS  K FY
Sbjct: 1    MWALRRSSNRLKNQGFSIGTLQACHAKSEMLSTYYKDMTGICKSPQVINDCHLSSRK-FY 59

Query: 226  ESPSAVGKLSFGSRGLSSQAGAXXXXXXXXXXXXXXXXXTPLSDVTEEVTAEEDIEDLIS 405
                     S GS   SSQAGA                        +    E+D+ED  S
Sbjct: 60   HPTDIYSVFSMGSCSFSSQAGA------------------------KSSGEEDDLEDGFS 95

Query: 406  EPELSG--------------EDDILTEDPHDEHDI---------VDTKQGVSDGVPPKKA 516
            E E SG              ED++L++   D+ +I         +DT   VS+   P+K 
Sbjct: 96   ELEASGNAGGFQDSDAESEHEDELLSDPKSDDDEIESTQNELEPLDTDTDVSEKRSPRKR 155

Query: 517  ASSDLFKVISIATRYTLDDVLDKWLERGNTLNRNEISLVMLNLRKRRFYGKALQFSEWLE 696
             SS+LFK I  A+   +  VL+KW + G  ++R EI+  MLNLRK R + KALQFSEW+E
Sbjct: 156  VSSELFKAIMAASDQPIHSVLNKWDQEGKDMSRAEIAQTMLNLRKIRMFLKALQFSEWME 215

Query: 697  KKRTFD--ERDYASRLDLIAKVLGLYKAEAYVKDVPESFRGEVLYRTLLANCVVAGNKEK 870
            + +  D  ERDYASR+DLIAKV GL KAE Y++ +P+SFRGE++YRTLLANCV   N +K
Sbjct: 216  EHKKLDMVERDYASRVDLIAKVRGLQKAEHYIEKIPKSFRGELVYRTLLANCVSTTNAKK 275

Query: 871  AEDVFNKMKKLELQITSFACNQXXXXXXXXXXXXIADVLKLMELQNIRLSAFTYRLLIDA 1050
            AE+VFNKMK L   IT+FACNQ            IADVL LME ++++ S FTY LLID 
Sbjct: 276  AEEVFNKMKDLGFPITTFACNQLLLLYKRVDKKKIADVLLLMEKEDVKPSLFTYGLLIDT 335

Query: 1051 RGQANDIEGMEKCVETMKEDGFEPDMQTQGLLVRHYVTGGFTEKAEAILKEMEGTNLKEN 1230
            +GQ+NDI GME+ VETMK +G EP++Q Q +LVRHYV GG  EKAEAILKEMEG NLKEN
Sbjct: 336  KGQSNDITGMEQIVETMKAEGIEPNLQVQSILVRHYVFGGLKEKAEAILKEMEGGNLKEN 395

Query: 1231 RWACRILLPLYAELGMDKEVGRIWKICDPNPHVEECLAAIE 1353
            RW CR+LLP YA LG   +V RIWK+C+ NP + E +AAIE
Sbjct: 396  RWVCRVLLPPYAALGKADDVERIWKVCESNPRLPEFVAAIE 436


>ref|XP_002308888.1| predicted protein [Populus trichocarpa] gi|222854864|gb|EEE92411.1|
            predicted protein [Populus trichocarpa]
          Length = 555

 Score =  360 bits (924), Expect = 5e-97
 Identities = 191/367 (52%), Positives = 246/367 (67%), Gaps = 4/367 (1%)
 Frame = +1

Query: 265  RGLSSQAGAXXXXXXXXXXXXXXXXXTPLSDVTEEVTAEEDIED-LISEPELSGED-DIL 438
            RG +SQAGA                 TP +     V A    ED LISEPELS +D D +
Sbjct: 1    RGFASQAGAENSGSDDDLEDGFSELETPANANESTVNALAGNEDQLISEPELSDDDNDDI 60

Query: 439  TEDPHDEHDIVDTKQGVSDGVPPKKAASSDLFKVISIATRYTLDDVLDKWLERGNTLNRN 618
             E   +  ++ D +        P+K  +++LF  I  A+  ++  VLDKW+  G  L+R 
Sbjct: 61   GEPSQNALELSDNETDSVVKSLPRKRPTTELFNAIVSASDVSVQSVLDKWVAEGKDLDRL 120

Query: 619  EISLVMLNLRKRRFYGKALQFSEWLE--KKRTFDERDYASRLDLIAKVLGLYKAEAYVKD 792
            EIS  M+NLRKRR +G+ALQ SEW E  K + F ERDYASRLDLIAKV GL+KAE Y+  
Sbjct: 121  EISNAMINLRKRRMFGRALQLSEWFEANKPQEFVERDYASRLDLIAKVRGLHKAEVYIDK 180

Query: 793  VPESFRGEVLYRTLLANCVVAGNKEKAEDVFNKMKKLELQITSFACNQXXXXXXXXXXXX 972
            +P+SF+GEV+YRTLLANCVV  N +KAE+VFNKM+ LE  IT FACNQ            
Sbjct: 181  IPKSFKGEVIYRTLLANCVVDHNVKKAEEVFNKMRDLEFPITPFACNQLLLLYKRLDKKK 240

Query: 973  IADVLKLMELQNIRLSAFTYRLLIDARGQANDIEGMEKCVETMKEDGFEPDMQTQGLLVR 1152
            IADVL LME +N++ S FTY++LID +GQ+ND+ GM++ VETMK +G EPD++TQ ++ R
Sbjct: 241  IADVLLLMEKENVKPSLFTYKILIDTKGQSNDMTGMDQIVETMKAEGIEPDIRTQAIMAR 300

Query: 1153 HYVTGGFTEKAEAILKEMEGTNLKENRWACRILLPLYAELGMDKEVGRIWKICDPNPHVE 1332
            HYV+GG  EKAEAILKEMEG NL+E+RWACR +LPLY  LG   EV R+WK C+ +P ++
Sbjct: 301  HYVSGGLKEKAEAILKEMEGGNLEEHRWACRFMLPLYGALGKADEVSRVWKFCEKSPRLD 360

Query: 1333 ECLAAIE 1353
            EC+AAIE
Sbjct: 361  ECMAAIE 367


>ref|XP_003624990.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355500005|gb|AES81208.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 623

 Score =  353 bits (906), Expect = 6e-95
 Identities = 204/448 (45%), Positives = 269/448 (60%), Gaps = 14/448 (3%)
 Frame = +1

Query: 52   MWALRRTINPCRGYHVGAFRACGVKLDTLTNDLDHAAETCNLTQFVPNGSLSVPKSFYES 231
            MWALRR     R       R   VKL   T+  D +    +          S     Y S
Sbjct: 1    MWALRRASLSLRNKSFNV-RVSSVKLLPNTSVEDESGVFDSPKMVCAKCGFSSMNLCYCS 59

Query: 232  PSAVG----KLSFGSRGLSSQAGAXXXXXXXXXXXXXXXXX-TPLSDVTEE-VTAEEDIE 393
             S  G    K S G  G SS+AGA                  TPL + +E+ V ++ +  
Sbjct: 60   GSNSGHGFLKFSLGRLGFSSEAGAKTTKEEDDDLEDGFSELETPLGEESEKGVVSDSEDS 119

Query: 394  DLISEPELSGEDDILTEDPHDE------HDIVDTKQGVSDGVPPKKAASSDLFKVISIAT 555
            D   E E++G        PH+E      HD+ +   G       +K A S+LFK I   T
Sbjct: 120  DESDESEITG--------PHNELELPLSHDVDEVSTGKRSS---RKRADSELFKAIMNGT 168

Query: 556  RYTLDDVLDKWLERGNTLNRNEISLVMLNLRKRRFYGKALQFSEWLEKKR--TFDERDYA 729
              T+   L+KW+E G  L+R EISL M+NLR+R+ Y KALQ SEWLE K+   F ERDYA
Sbjct: 169  GPTIYTALEKWVEDGKELSREEISLTMINLRRRKIYLKALQLSEWLESKKHLEFVERDYA 228

Query: 730  SRLDLIAKVLGLYKAEAYVKDVPESFRGEVLYRTLLANCVVAGNKEKAEDVFNKMKKLEL 909
            S+LDLIAK+ GL+KAE Y++ +PESFRGE++YRTLLANCV   N +KAE++FNKMK LE 
Sbjct: 229  SQLDLIAKLHGLHKAEVYIEKIPESFRGEIIYRTLLANCVTQNNLKKAEEIFNKMKDLEF 288

Query: 910  QITSFACNQXXXXXXXXXXXXIADVLKLMELQNIRLSAFTYRLLIDARGQANDIEGMEKC 1089
             +T FACNQ            IADVL LME +N++ S  T+++LID +GQ+NDI+GM++ 
Sbjct: 289  PLTPFACNQLLLLYKRTDKKKIADVLLLMEQENVKPSPLTFKILIDVKGQSNDIDGMDQI 348

Query: 1090 VETMKEDGFEPDMQTQGLLVRHYVTGGFTEKAEAILKEMEGTNLKENRWACRILLPLYAE 1269
            V+ M+ +G EPD  T+ +LV HY++GG  +KA+ +LKEMEG NLKENRW CR+LL LYA+
Sbjct: 349  VDQMRAEGIEPDNYTKAVLVGHYISGGHDDKAKMLLKEMEGENLKENRWVCRLLLALYAK 408

Query: 1270 LGMDKEVGRIWKICDPNPHVEECLAAIE 1353
            LGM  EVGR+WK+C+  P VE+C+AAIE
Sbjct: 409  LGMADEVGRVWKVCETRPSVEDCVAAIE 436


>ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
            mitochondrial-like [Vitis vinifera]
          Length = 587

 Score =  353 bits (905), Expect = 7e-95
 Identities = 203/420 (48%), Positives = 256/420 (60%), Gaps = 25/420 (5%)
 Frame = +1

Query: 169  CNLTQFVPNGSLSVPKSFYESPSAVGKLSFGSRGLSSQAGAXXXXXXXXXXXXXXXXXTP 348
            C   Q + +  LS  K FY         S GS   SSQAGA                   
Sbjct: 5    CKSPQVINDCHLSSRK-FYHPTDIYSVFSMGSCSFSSQAGA------------------- 44

Query: 349  LSDVTEEVTAEEDIEDLISEPELSG--------------EDDILTEDPHDEHDI------ 468
                 +    E+D+ED  SE E SG              ED++L++   D+ +I      
Sbjct: 45   -----KSSGEEDDLEDGFSELEASGNAGGFQDSDAESEHEDELLSDPKSDDDEIESTQNE 99

Query: 469  ---VDTKQGVSDGVPPKKAASSDLFKVISIATRYTLDDVLDKWLERGNTLNRNEISLVML 639
               +DT   VS+   P+K  SS+LFK I  A+   +  VL+KW + G  ++R EI+  ML
Sbjct: 100  LEPLDTDTDVSEKRSPRKRVSSELFKAIMAASDQPIHSVLNKWDQEGKDMSRAEIAQTML 159

Query: 640  NLRKRRFYGKALQFSEWLEKKRTFD--ERDYASRLDLIAKVLGLYKAEAYVKDVPESFRG 813
            NLRK R + KALQFSEW+E+ +  D  ERDYASR+DLIAKV GL KAE Y++ +P+SFRG
Sbjct: 160  NLRKIRMFLKALQFSEWMEEHKKLDMVERDYASRVDLIAKVRGLQKAEHYIEKIPKSFRG 219

Query: 814  EVLYRTLLANCVVAGNKEKAEDVFNKMKKLELQITSFACNQXXXXXXXXXXXXIADVLKL 993
            E++YRTLLANCV   N +KAE+VFNKMK L   IT+FACNQ            IADVL L
Sbjct: 220  ELVYRTLLANCVSTTNAKKAEEVFNKMKDLGFPITTFACNQLLLLYKRVDKKKIADVLLL 279

Query: 994  MELQNIRLSAFTYRLLIDARGQANDIEGMEKCVETMKEDGFEPDMQTQGLLVRHYVTGGF 1173
            ME ++++ S FTY LLID +GQ+NDI GME+ VETMK +G EP++Q Q +LVRHYV GG 
Sbjct: 280  MEKEDVKPSLFTYGLLIDTKGQSNDITGMEQIVETMKAEGIEPNLQVQSILVRHYVFGGL 339

Query: 1174 TEKAEAILKEMEGTNLKENRWACRILLPLYAELGMDKEVGRIWKICDPNPHVEECLAAIE 1353
             EKAEAILKEMEG NLKENRW CR+LLP YA LG   +V RIWK+C+ NP + E +AAIE
Sbjct: 340  KEKAEAILKEMEGGNLKENRWVCRVLLPPYAALGKADDVERIWKVCESNPRLPEFVAAIE 399


>ref|XP_003518031.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
            mitochondrial-like [Glycine max]
          Length = 609

 Score =  352 bits (903), Expect = 1e-94
 Identities = 210/448 (46%), Positives = 271/448 (60%), Gaps = 14/448 (3%)
 Frame = +1

Query: 52   MWALRRT---INPCRGYHVGAFRACGVKLDTLTNDLDHAAETCNLTQFVPNGSLSVPKSF 222
            MW LRR    ++  +G + GA RA  VKL  +T + ++ A      Q   +  LS   +F
Sbjct: 1    MWTLRRASLRLSTSQGLNAGATRASAVKLVPITVE-ENEAGIPQSRQITHSRFLSAD-TF 58

Query: 223  YESPSAVGKLSFGSRGLSSQAGAXXXXXXXXXXXXXXXXXTPLSDVTEEVTAEEDIEDLI 402
              +     K + G+R LSSQAGA                 T + D        +D+E  +
Sbjct: 59   CRTGRVSLKFAVGTRELSSQAGASS---------------TKVDD--------DDLEGGL 95

Query: 403  SEPELSGEDDILTEDPHDEHDI----VDTKQGVSDGVPPKKAAS-----SDLFKVISIAT 555
            SE E+ G +D    D  DE +     VD +  +SD  P KK +      S+LFK I+ A 
Sbjct: 96   SELEIQGSNDESDADLSDEDEDGGKPVD-EMDLSDADPTKKKSQGRRTQSELFKAIANAP 154

Query: 556  RYTLDDVLDKWLERGNTLNRNEISLVMLNLRKRRFYGKALQFSEWLE--KKRTFDERDYA 729
              ++D  L+KW+E G  L+R EI L +  LR+R+ YG+A Q  +WLE  KK  F E DYA
Sbjct: 155  GLSVDSALNKWVEHGKELSRKEILLAVRELRRRKMYGRAFQLFQWLESNKKLEFMESDYA 214

Query: 730  SRLDLIAKVLGLYKAEAYVKDVPESFRGEVLYRTLLANCVVAGNKEKAEDVFNKMKKLEL 909
            S+LDLIAK+ GL KAE Y++ VPESFRGE+LYRTLLANC    N    E +FNKMK L+L
Sbjct: 215  SQLDLIAKLRGLPKAEKYIESVPESFRGELLYRTLLANCASQNNLIATEKIFNKMKDLDL 274

Query: 910  QITSFACNQXXXXXXXXXXXXIADVLKLMELQNIRLSAFTYRLLIDARGQANDIEGMEKC 1089
             +T+FACNQ            IADVL LME +N++ S FTYR+LID++GQ+NDI GME+ 
Sbjct: 275  PLTAFACNQLLLLYKKLDKKKIADVLLLMEKENVKPSLFTYRILIDSKGQSNDIAGMEQV 334

Query: 1090 VETMKEDGFEPDMQTQGLLVRHYVTGGFTEKAEAILKEMEGTNLKENRWACRILLPLYAE 1269
             ETMKE+GFEPD+Q Q LL RHY + G  EKAEA+LKEMEG NLKEN+W C  LL LYA 
Sbjct: 335  FETMKEEGFEPDIQIQALLARHYTSSGLKEKAEAMLKEMEGENLKENQWVCATLLRLYAN 394

Query: 1270 LGMDKEVGRIWKICDPNPHVEECLAAIE 1353
            LG   EV RIWK+C+  P VE+CLAA+E
Sbjct: 395  LGKADEVERIWKVCESKPRVEDCLAAVE 422