BLASTX nr result

ID: Coptis24_contig00009124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009124
         (988 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265011.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5, ...   280   5e-73
emb|CAN68120.1| hypothetical protein VITISV_024174 [Vitis vinifera]   254   2e-65
ref|XP_002309803.1| predicted protein [Populus trichocarpa] gi|2...   219   6e-55
emb|CBI36670.3| unnamed protein product [Vitis vinifera]              214   2e-53
ref|XP_002266504.1| PREDICTED: protein FAR-RED IMPAIRED RESPONSE...   214   2e-53

>ref|XP_002265011.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5, partial [Vitis
           vinifera]
          Length = 190

 Score =  280 bits (715), Expect = 5e-73
 Identities = 132/183 (72%), Positives = 162/183 (88%)
 Frame = -2

Query: 813 CEGDQIQEPCVGMVFESEDAAKGFYDEYARRVGFIGRIVSSRRSERDGSFISRKLACNKE 634
           CE D  QEP  G++FESE+AA+ FY+EYARRVGF+ RI+SSR+SERDGS ISR+LACNKE
Sbjct: 8   CEVDTNQEPYEGLLFESEEAARAFYEEYARRVGFLTRIISSRKSERDGSIISRRLACNKE 67

Query: 633 GFNLSSRKIDRVRIRKRQSQREGCMAMMLVKRQKPGKWVVTKFVKEHNHPMVVNSNKERP 454
           GFNL+S+K  RVRIRKR+S+REGCMAM+LVKR+K GKWVVTKFV+EHNHP+V++S   RP
Sbjct: 68  GFNLNSQKTGRVRIRKRESKREGCMAMILVKREKLGKWVVTKFVREHNHPLVISSGNSRP 127

Query: 453 TPDEKDKKIQELSSELNRANRRLAACQEQLNVFMKLVEDHTQHLTGTVEEMVHNVREIDS 274
           TPDEKD+KI+ELSSEL+RAN+RLAAC+EQL  FM  +E+HTQ L+ TVE +VHN+REI+S
Sbjct: 128 TPDEKDRKIRELSSELHRANQRLAACREQLRTFMTYIEEHTQSLSRTVENVVHNIREIES 187

Query: 273 EDQ 265
           EDQ
Sbjct: 188 EDQ 190


>emb|CAN68120.1| hypothetical protein VITISV_024174 [Vitis vinifera]
          Length = 439

 Score =  254 bits (649), Expect = 2e-65
 Identities = 125/194 (64%), Positives = 155/194 (79%)
 Frame = -2

Query: 894 LEIRASEDAIAIEDSTGIDLVECELVACEGDQIQEPCVGMVFESEDAAKGFYDEYARRVG 715
           +E    +  +  E S G      E   CE D  QEP  G++FESE+AA+ FY+EYARRVG
Sbjct: 1   METLIEDKVVTTESSAG-----GESGLCEVDTNQEPYEGLLFESEEAARAFYEEYARRVG 55

Query: 714 FIGRIVSSRRSERDGSFISRKLACNKEGFNLSSRKIDRVRIRKRQSQREGCMAMMLVKRQ 535
           F+ RI+SSR+SERDGS ISR+LACNKEGFNL+S+K  RVRIRKR+S+REGCMAM+LVKR+
Sbjct: 56  FLTRIISSRKSERDGSIISRRLACNKEGFNLNSQKTGRVRIRKRESKREGCMAMILVKRE 115

Query: 534 KPGKWVVTKFVKEHNHPMVVNSNKERPTPDEKDKKIQELSSELNRANRRLAACQEQLNVF 355
           K GKWVVTKFV+EHNHP+V++S   RPTPDEKD+KI+ELSSEL+RAN+RLAAC+EQL  F
Sbjct: 116 KLGKWVVTKFVREHNHPLVISSGNSRPTPDEKDRKIRELSSELHRANQRLAACREQLRTF 175

Query: 354 MKLVEDHTQHLTGT 313
           M  +E+HTQ L+ T
Sbjct: 176 MTYIEEHTQSLSRT 189



 Score =  147 bits (370), Expect = 5e-33
 Identities = 82/186 (44%), Positives = 113/186 (60%), Gaps = 9/186 (4%)
 Frame = -2

Query: 792 EPCVGMVFESEDAAKGFYDEYARRVGFIGRIVSSRRSERDGSFISRKLACNKEGFNLSSR 613
           EPCVGM FES + A+ FY+ Y RR+GF  R   +RRS +D S I R+  C+KEGF +   
Sbjct: 251 EPCVGMEFESAEDAREFYEMYGRRMGFTIRNNRTRRSLKDNSIIGREFVCSKEGFRVEKY 310

Query: 612 KIDRVRI-RKRQSQREGCMAMMLVKRQKPGKWVVTKFVKEHNHPMVVNSNKERP------ 454
                RI   R   REGC AM+ +  +  GKW +  FVKEHNH +  N +K  P      
Sbjct: 311 ANREHRILPSRPITREGCNAMLRIAAKDEGKWAIYGFVKEHNHEL--NPSKMPPRRSHRI 368

Query: 453 --TPDEKDKKIQELSSELNRANRRLAACQEQLNVFMKLVEDHTQHLTGTVEEMVHNVREI 280
               D+KD KI+ELS+EL+R  ++ AA QEQL   +K +E+HT  L+  V  +V N+RE+
Sbjct: 369 AFCEDQKDLKIRELSTELHRERKKSAAYQEQLQTILKYIEEHTHRLSLKVXIVVXNLREL 428

Query: 279 DSEDQE 262
           +SE+Q+
Sbjct: 429 ESEEQD 434


>ref|XP_002309803.1| predicted protein [Populus trichocarpa] gi|222852706|gb|EEE90253.1|
           predicted protein [Populus trichocarpa]
          Length = 181

 Score =  219 bits (559), Expect = 6e-55
 Identities = 108/181 (59%), Positives = 145/181 (80%)
 Frame = -2

Query: 804 DQIQEPCVGMVFESEDAAKGFYDEYARRVGFIGRIVSSRRSERDGSFISRKLACNKEGFN 625
           D  QEP  GMVFESE+AA+ FYDEYA++ GF+ RIVSSR+SE DG+ ISR+LACNKEGFN
Sbjct: 1   DTSQEPYEGMVFESENAARVFYDEYAKQEGFLTRIVSSRKSEHDGTIISRRLACNKEGFN 60

Query: 624 LSSRKIDRVRIRKRQSQREGCMAMMLVKRQKPGKWVVTKFVKEHNHPMVVNSNKERPTPD 445
           LSS+K  +V+IRKR+ +REGCMAM+LVKR+K GKWVVTKF++EHNHP+V++S K     D
Sbjct: 61  LSSQKTGQVKIRKRERKREGCMAMILVKREKLGKWVVTKFMREHNHPLVISSKK-----D 115

Query: 444 EKDKKIQELSSELNRANRRLAACQEQLNVFMKLVEDHTQHLTGTVEEMVHNVREIDSEDQ 265
           EKD KI+ELS+EL+R  ++ AA Q+QL + +  +E+HTQ L+   E + + V+E++SE+ 
Sbjct: 116 EKDLKIRELSTELHREKKKSAAYQKQLQMVLTYIEEHTQRLSLKAEVVANKVKELESEEP 175

Query: 264 E 262
           E
Sbjct: 176 E 176


>emb|CBI36670.3| unnamed protein product [Vitis vinifera]
          Length = 197

 Score =  214 bits (546), Expect = 2e-53
 Identities = 106/189 (56%), Positives = 143/189 (75%)
 Frame = -2

Query: 825 ELVACEGDQIQEPCVGMVFESEDAAKGFYDEYARRVGFIGRIVSSRRSERDGSFISRKLA 646
           EL++ EGD +QEP  GM+FESE AAK FYDEYARRVGF+ R++SSR+SERDGS ISR L 
Sbjct: 8   ELISFEGDTVQEPYEGMLFESEGAAKAFYDEYARRVGFVTRVLSSRKSERDGSIISRGLG 67

Query: 645 CNKEGFNLSSRKIDRVRIRKRQSQREGCMAMMLVKRQKPGKWVVTKFVKEHNHPMVVNSN 466
           C     N  +R +   + +KR  +REGC AM+LVKR+KPG+W+V KFV++HNHP+VV   
Sbjct: 68  CRGGSDNKKARHL---QTQKRDRRREGCTAMILVKREKPGQWIVRKFVRDHNHPLVVQLQ 124

Query: 465 KERPTPDEKDKKIQELSSELNRANRRLAACQEQLNVFMKLVEDHTQHLTGTVEEMVHNVR 286
           K RPT DEKDKKIQEL++EL    R  +A +EQL +F+K VE+H +HL+  VE +V N++
Sbjct: 125 KSRPTLDEKDKKIQELTAELRVKKRLTSAYREQLLMFVKDVENHNEHLSKKVEVVVDNLK 184

Query: 285 EIDSEDQEL 259
           +++++ QEL
Sbjct: 185 DLEAKRQEL 193


>ref|XP_002266504.1| PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1-like [Vitis
           vinifera]
          Length = 208

 Score =  214 bits (546), Expect = 2e-53
 Identities = 106/189 (56%), Positives = 143/189 (75%)
 Frame = -2

Query: 825 ELVACEGDQIQEPCVGMVFESEDAAKGFYDEYARRVGFIGRIVSSRRSERDGSFISRKLA 646
           EL++ EGD +QEP  GM+FESE AAK FYDEYARRVGF+ R++SSR+SERDGS ISR L 
Sbjct: 19  ELISFEGDTVQEPYEGMLFESEGAAKAFYDEYARRVGFVTRVLSSRKSERDGSIISRGLG 78

Query: 645 CNKEGFNLSSRKIDRVRIRKRQSQREGCMAMMLVKRQKPGKWVVTKFVKEHNHPMVVNSN 466
           C     N  +R +   + +KR  +REGC AM+LVKR+KPG+W+V KFV++HNHP+VV   
Sbjct: 79  CRGGSDNKKARHL---QTQKRDRRREGCTAMILVKREKPGQWIVRKFVRDHNHPLVVQLQ 135

Query: 465 KERPTPDEKDKKIQELSSELNRANRRLAACQEQLNVFMKLVEDHTQHLTGTVEEMVHNVR 286
           K RPT DEKDKKIQEL++EL    R  +A +EQL +F+K VE+H +HL+  VE +V N++
Sbjct: 136 KSRPTLDEKDKKIQELTAELRVKKRLTSAYREQLLMFVKDVENHNEHLSKKVEVVVDNLK 195

Query: 285 EIDSEDQEL 259
           +++++ QEL
Sbjct: 196 DLEAKRQEL 204


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