BLASTX nr result

ID: Coptis24_contig00009123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009123
         (817 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284812.1| PREDICTED: uncharacterized protein LOC100268...    99   9e-19
ref|NP_001242337.1| uncharacterized protein LOC100781938 [Glycin...    99   1e-18
ref|XP_002308634.1| predicted protein [Populus trichocarpa] gi|2...    99   1e-18
ref|XP_002516608.1| conserved hypothetical protein [Ricinus comm...    96   1e-17
ref|NP_196705.1| CTC-interacting domain 5 [Arabidopsis thaliana]...    87   4e-15

>ref|XP_002284812.1| PREDICTED: uncharacterized protein LOC100268154 isoform 1 [Vitis
           vinifera]
          Length = 198

 Score = 99.4 bits (246), Expect = 9e-19
 Identities = 70/180 (38%), Positives = 92/180 (51%), Gaps = 42/180 (23%)
 Frame = +2

Query: 104 SSLNPYASSYIPLSKRGKGSENRPAYVYPEDSV-------------------------GD 208
           SSLNP+A SYIPLSKR   +E + + +  E S                           D
Sbjct: 6   SSLNPFAESYIPLSKREPKNEGKTSEITAEKSPKSSGETTWFGTRSQGPKETKQIYLQSD 65

Query: 209 DKTSLTKHPAI------------HKRWTNRN----LSEESEMDLAILSRNYPGVSDQSIV 340
               L  H               H+  +N        E+S+MDLA L   +PG+SDQS++
Sbjct: 66  ASFDLNIHGIEELLIGEDFMKKGHENPSNETEKYYTDEDSQMDLAYLGTLFPGISDQSLL 125

Query: 341 DVYFANAGDLEASLDMLKQLEF-PVEFDQCLPDTLDIGDVADFGSSAEVTTVIPKAILGE 517
           DVY AN GDLEAS+DML QLEF PV+  + LP++LDIGDV+D  SSAE ++ +     GE
Sbjct: 126 DVYTANGGDLEASIDMLNQLEFYPVDARRHLPESLDIGDVSDVKSSAEGSSKLKGICPGE 185


>ref|NP_001242337.1| uncharacterized protein LOC100781938 [Glycine max]
           gi|255640675|gb|ACU20622.1| unknown [Glycine max]
          Length = 212

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 65/182 (35%), Positives = 91/182 (50%), Gaps = 39/182 (21%)
 Frame = +2

Query: 89  MDPKKSSLNPYASSYIPLSKRG------------------------KGSENRP------- 175
           M P+ SSLNPYA+SY+PLSKRG                        +G+ N P       
Sbjct: 1   MKPQSSSLNPYATSYVPLSKRGVDGRTPSTEKDSKTYNGTVWFQTHQGATNDPQLINTSL 60

Query: 176 -------AYVYPEDSVGDDKTSLTKHPAIHKRWTNRNLSEESEMDLAILSRNYPGVSDQS 334
                  +++          T  T    + +   N+ L EE +MDL  L  N+PG+S QS
Sbjct: 61  ERLSKSESFLAKGQPASSSYTGYTSSQNVAELSDNQLLDEEVDMDLEYLRMNFPGISYQS 120

Query: 335 IVDVYFANAGDLEASLDMLKQLEFP-VEFDQCLPDTLDIGDVADFGSSAEVTTVIPKAIL 511
           +VDVY  N+GDL+A++DML QLE    E    LP+TLDIGDV++ G  A+  ++  K + 
Sbjct: 121 LVDVYNVNSGDLDAAIDMLSQLELEGDETSGILPETLDIGDVSESGLPADSASLKQKNVA 180

Query: 512 GE 517
            E
Sbjct: 181 EE 182


>ref|XP_002308634.1| predicted protein [Populus trichocarpa] gi|222854610|gb|EEE92157.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 65/172 (37%), Positives = 92/172 (53%), Gaps = 34/172 (19%)
 Frame = +2

Query: 104 SSLNPYASSYIPLSKRGK--------------------GSENRPAYVYPEDS--VGDDKT 217
           S+LNPYA++YIPLSKR                      GS    A +   D   +   + 
Sbjct: 7   STLNPYAAAYIPLSKRDSADRIENPGWTVQGGNPNVWYGSAKHNAQIRQNDKGPISVPEM 66

Query: 218 SLTKHPAIHKRWTN-----------RNLSEESEMDLAILSRNYPGVSDQSIVDVYFANAG 364
           S+ K  + +  + +           +N+ EE EMDL  L  N+PG+SD+S+  VY AN G
Sbjct: 67  SMLKSQSGYGSYGSSSQNSYEMTGKQNVDEEFEMDLEYLRINFPGISDESLTGVYMANKG 126

Query: 365 DLEASLDMLKQLEF-PVEFDQCLPDTLDIGDVADFGSSAEVTTVIPKAILGE 517
           D++A++DML QLEF  +E    LPDTLDIGDV +   SAE ++V PK ++ E
Sbjct: 127 DIDAAIDMLNQLEFDTLESSGNLPDTLDIGDVYEPRPSAEASSVKPKTVVDE 178


>ref|XP_002516608.1| conserved hypothetical protein [Ricinus communis]
           gi|223544428|gb|EEF45949.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 194

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 68/177 (38%), Positives = 86/177 (48%), Gaps = 34/177 (19%)
 Frame = +2

Query: 89  MDPKKSSLNPYASSYIPLSKR-GKGSENRPAYVYPEDSVGD-----------------DK 214
           M P  S LNPYA+SY+PLSKR   G    P         GD                 +K
Sbjct: 1   MKPGVSRLNPYAASYVPLSKREAAGKTEVPGLTTKSSHAGDQTIWFGPAEHTTQKKQHEK 60

Query: 215 TS-----LTKHPAIHKRW----------TNRNLSEESEMDLAILSRNYPGVSDQSIVDVY 349
           TS     + K    H  +          T +    E    L  L  ++PGVSD+S+ DVY
Sbjct: 61  TSDYDLSVLKSHTFHVAYGSSSQNPDDLTEKQTVNEDYDILEFLQASFPGVSDESLNDVY 120

Query: 350 FANAGDLEASLDMLKQLEFPV-EFDQCLPDTLDIGDVADFGSSAEVTTVIPKAILGE 517
            AN  DLEA++DML  LEF   E+ + LPDTLDIGDV++ GS AE  +V  K + GE
Sbjct: 121 KANKCDLEATIDMLNHLEFDTFEYSENLPDTLDIGDVSELGSLAECASVKLKNVAGE 177


>ref|NP_196705.1| CTC-interacting domain 5 [Arabidopsis thaliana]
           gi|7573401|emb|CAB87704.1| putative protein [Arabidopsis
           thaliana] gi|52354449|gb|AAU44545.1| hypothetical
           protein AT5G11440 [Arabidopsis thaliana]
           gi|55740661|gb|AAV63923.1| hypothetical protein
           At5g11440 [Arabidopsis thaliana]
           gi|332004297|gb|AED91680.1| CTC-interacting domain 5
           [Arabidopsis thaliana]
          Length = 155

 Score = 87.0 bits (214), Expect = 4e-15
 Identities = 55/151 (36%), Positives = 86/151 (56%), Gaps = 12/151 (7%)
 Frame = +2

Query: 89  MDPKKSSLNPYASSYIPLSKRGK--GSENRPAYVYPEDSVGDDKTSLTKHPAIHK-RWTN 259
           M P   +LNP+A+SY+P+SKR    G ++   +     +V       +   A  + R  +
Sbjct: 1   MKPGAFALNPHAASYVPISKRVDYGGGDDGLVFAAKSPTVEVSMPKKSSEMAYKQIRDDD 60

Query: 260 RNLSEESEMDLAILSRNYPGVSDQSIVDVYFANAGDLEASLDMLKQLE-FPVEFDQCLPD 436
            +L  + +MD+  L   + G+S +SI DVY AN GDLEA+++ML QLE +  E ++ LP+
Sbjct: 61  LDLEMDIDMDIEYLLVTFSGLSQESITDVYLANGGDLEATIEMLNQLEIYSTESEENLPE 120

Query: 437 TLDIGDVADFGSS--------AEVTTVIPKA 505
           TLDIGD+++ G S        A  ++VIP A
Sbjct: 121 TLDIGDISESGPSTSKSTEVAASTSSVIPNA 151


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