BLASTX nr result

ID: Coptis24_contig00009113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009113
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82685.1| hypothetical protein VITISV_000485 [Vitis vinifera]    54   3e-12
emb|CAN75040.1| hypothetical protein VITISV_026478 [Vitis vinifera]    54   5e-12
emb|CAN68609.1| hypothetical protein VITISV_012924 [Vitis vinifera]    63   1e-11
emb|CAN68820.1| hypothetical protein VITISV_009132 [Vitis vinifera]    55   1e-11
emb|CAN70431.1| hypothetical protein VITISV_030910 [Vitis vinifera]    52   2e-11

>emb|CAN82685.1| hypothetical protein VITISV_000485 [Vitis vinifera]
          Length = 1563

 Score = 54.3 bits (129), Expect(2) = 3e-12
 Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
 Frame = -1

Query: 348 FAKAFDSVSWS-IDYLLGRFWFGFKWRRWIKSWLSTAHFSAMVNGCPEVFFTSTKGLCQG 172
           F KA+D V W  +D++L R  F  KWR WI+  LS++ F+ +VNG  + +  +++GL QG
Sbjct: 525 FEKAYDHVDWGFLDHVLQRKRFSQKWRTWIRGCLSSSSFAILVNGNAKGWVKASRGLRQG 584

Query: 171 D 169
           D
Sbjct: 585 D 585



 Score = 42.0 bits (97), Expect(2) = 3e-12
 Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
 Frame = -3

Query: 184 LVSGRPLSPFLF----ESFTRIIFKAQDNELISGFSAAATSSIIPILH---NTMFFIDAK 26
           L  G PLSPFLF    +  +R++F+A++  L  GFS     + + +L    +T+FF  A 
Sbjct: 581 LRQGDPLSPFLFTLVADVLSRVLFRAEETGLTEGFSVGRDRTRVSLLQFADDTIFFSKAS 640

Query: 25  VDQVINLK 2
           ++ + NLK
Sbjct: 641 LEHLQNLK 648


>emb|CAN75040.1| hypothetical protein VITISV_026478 [Vitis vinifera]
          Length = 1776

 Score = 54.3 bits (129), Expect(2) = 5e-12
 Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
 Frame = -1

Query: 348  FAKAFDSVSWS-IDYLLGRFWFGFKWRRWIKSWLSTAHFSAMVNGCPEVFFTSTKGLCQG 172
            F KA+D V W  +D++L R  F  KWR WI+  LS++ F+ +VNG  + +  +++GL QG
Sbjct: 1204 FEKAYDHVDWGFLDHVLQRKGFSQKWRLWIRGCLSSSSFAILVNGNAKGWVKASRGLRQG 1263

Query: 171  D 169
            D
Sbjct: 1264 D 1264



 Score = 41.2 bits (95), Expect(2) = 5e-12
 Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
 Frame = -3

Query: 184  LVSGRPLSPFLF----ESFTRIIFKAQDNELISGFSAAATSSIIPILH---NTMFFIDAK 26
            L  G PLSPFLF    +  +R++F+A++  L  GFS     + + +L    +T+FF  A 
Sbjct: 1260 LRQGDPLSPFLFTLVADVLSRMLFRAEETGLTEGFSVGRDRTRVSLLQFADDTIFFSKAS 1319

Query: 25   VDQVINLK 2
            ++ + NLK
Sbjct: 1320 MEHLQNLK 1327


>emb|CAN68609.1| hypothetical protein VITISV_012924 [Vitis vinifera]
          Length = 1930

 Score = 56.6 bits (135), Expect(2) = 1e-11
 Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
 Frame = -1

Query: 342  KAFDSVSWS-IDYLLGRFWFGFKWRRWIKSWLSTAHFSAMVNGCPEVFFTSTKGLCQGD 169
            KAFD V W+ +  ++ +  FG +W  WIK   STA FS ++NG P  FF S++GL QG+
Sbjct: 1469 KAFDHVKWNFLMEVMSKMGFGHRWIDWIKWCCSTASFSILINGSPSGFFRSSRGLRQGN 1527



 Score = 37.4 bits (85), Expect(2) = 1e-11
 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 10/67 (14%)
 Frame = -3

Query: 184  LVSGRPLSPFLF----ESFTRIIFKAQDNELISGF------SAAATSSIIPILHNTMFFI 35
            L  G PLSP+LF    E+F +++ +A++   ISGF      S     S +   ++T+ F 
Sbjct: 1523 LRQGNPLSPYLFLLAMEAFNQLLSRARNGNFISGFRVGGRGSEGLFVSHLLFANDTLIFC 1582

Query: 34   DAKVDQV 14
            DA  DQ+
Sbjct: 1583 DADADQL 1589



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/59 (54%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
 Frame = -1

Query: 342 KAFDSVSWS-IDYLLGRFWFGFKWRRWIKSWLSTAHFSAMVNGCPEVFFTSTKGLCQGD 169
           KA+D+V W+ I  ++ +  FG KW RWIK  +STA FS +VNG P  FF S+KGL QGD
Sbjct: 252 KAYDNVDWTFILTVMQKMGFGEKWIRWIKWCISTASFSXLVNGTPTGFFQSSKGLRQGD 310


>emb|CAN68820.1| hypothetical protein VITISV_009132 [Vitis vinifera]
          Length = 1910

 Score = 54.7 bits (130), Expect(2) = 1e-11
 Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
 Frame = -1

Query: 348  FAKAFDSVSWS-IDYLLGRFWFGFKWRRWIKSWLSTAHFSAMVNGCPEVFFTSTKGLCQG 172
            F KA+D V W  +D++L R  F  KWR WI+  LS++ F+ +VNG  + +  +++GL QG
Sbjct: 1298 FEKAYDHVDWGFLDHVLQRKGFSQKWRSWIRGCLSSSSFTILVNGNAKGWVKASRGLRQG 1357

Query: 171  D 169
            D
Sbjct: 1358 D 1358



 Score = 39.3 bits (90), Expect(2) = 1e-11
 Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
 Frame = -3

Query: 184  LVSGRPLSPFLF----ESFTRIIFKAQDNELISGFSAAATSSIIPILH---NTMFFIDAK 26
            L  G PLSPFLF    +  +R++F+A++  L  GFS     + + +L    +T+ F  A 
Sbjct: 1354 LRQGDPLSPFLFTLVADVLSRLLFRAEETGLTEGFSVGRDRTRVSLLQFADDTIIFSKAS 1413

Query: 25   VDQVINLK 2
            ++ + NLK
Sbjct: 1414 LEHLQNLK 1421


>emb|CAN70431.1| hypothetical protein VITISV_030910 [Vitis vinifera]
          Length = 971

 Score = 52.0 bits (123), Expect(2) = 2e-11
 Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
 Frame = -1

Query: 348 FAKAFDSVSWS-IDYLLGRFWFGFKWRRWIKSWLSTAHFSAMVNGCPEVFFTSTKGLCQG 172
           F KA+D V W  +D++L R  F  KWR WI+  L ++ F+ +VNG  + +  +++GL QG
Sbjct: 239 FEKAYDHVDWGFLDHVLQRKGFSQKWRLWIRGCLYSSSFAILVNGNAKGWVKASRGLRQG 298

Query: 171 D 169
           D
Sbjct: 299 D 299



 Score = 41.2 bits (95), Expect(2) = 2e-11
 Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
 Frame = -3

Query: 184 LVSGRPLSPFLF----ESFTRIIFKAQDNELISGFSAAATSSIIPILH---NTMFFIDAK 26
           L  G PLSPFLF    +  +R++F+A++  L  GFS     + + +L    +T+FF  A 
Sbjct: 295 LRQGDPLSPFLFTLVADVLSRMLFRAEETGLTEGFSVGRDRTRVSLLQFADDTIFFSKAS 354

Query: 25  VDQVINLK 2
           ++ + NLK
Sbjct: 355 MEHLQNLK 362


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