BLASTX nr result

ID: Coptis24_contig00009109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009109
         (793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510090.1| conserved hypothetical protein [Ricinus comm...    74   3e-11
ref|XP_002320028.1| predicted protein [Populus trichocarpa] gi|2...    74   4e-11
ref|XP_002285345.1| PREDICTED: uncharacterized protein LOC100259...    72   1e-10
ref|XP_002301147.1| predicted protein [Populus trichocarpa] gi|2...    72   1e-10
ref|XP_003589063.1| hypothetical protein MTR_1g017990 [Medicago ...    59   2e-06

>ref|XP_002510090.1| conserved hypothetical protein [Ricinus communis]
           gi|223550791|gb|EEF52277.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 246

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 55/157 (35%), Positives = 81/157 (51%), Gaps = 4/157 (2%)
 Frame = -3

Query: 791 SSTRDWVPIVVKLKEQKEKKTEIIGKVKNKPASTMNNSEVLDK-PQTGSSVSNEVV---Q 624
           SS+ + VPIVVKLK+Q + K EI    K+KP  T + SE  DK P   S+ +++     Q
Sbjct: 84  SSSNEVVPIVVKLKDQNKAKDEI----KDKPR-TSSASETSDKLPVEASTAADDQQTNEQ 138

Query: 623 EKTKLERRIKNKSLLSSRHVVVKWRRSHXXXXXXXXXXXXXXXVYGKSFAILCTSIWWYL 444
            + +++++ ++K  ++    + KWRR                  +G+S AILCTSI WY+
Sbjct: 139 PRVQIDKKTEDKKKVTWNLKLNKWRRPSFYMPIFIILILLFLAFFGRSVAILCTSIGWYI 198

Query: 443 VPVMNQKELNSRKSMKKKDYGRWLSENKMVAEGIKSP 333
           VP ++ K   S K  KKK   R LSE       I  P
Sbjct: 199 VPTLSSKR-PSPKLAKKKQLVRRLSEISPRTRNIDDP 234


>ref|XP_002320028.1| predicted protein [Populus trichocarpa] gi|222860801|gb|EEE98343.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 2/158 (1%)
 Frame = -3

Query: 791 SSTRDWVPIVVKLKEQKEKKTEIIGKVKNKPASTMNNSEVLDKPQTGSSVSNEVVQEKTK 612
           SS+ D +P+++K+K+QK+ K  I      K      N+E LDK    + V  + V++   
Sbjct: 102 SSSNDCIPLIIKVKDQKQDKPRIGSANDIKENPNTRNNEGLDKLPVEAPVEEKQVEQPRL 161

Query: 611 LERRIKNKSLLSSRHVVVKWRRSHXXXXXXXXXXXXXXXVYGKSFAILCTSIWWYLVPVM 432
              +   K   +    + +WRR +               ++G+S AIL TS+ WY+VP  
Sbjct: 162 ETAKKTEKKSFTWNMKLHRWRRPYYYMPVALILILLLVVLFGRSVAILLTSLAWYIVPA- 220

Query: 431 NQKELNSRKSMKKKDYGRWLSE--NKMVAEGIKSPIVK 324
               L+++K  +KKDY R LSE    M+  G+ SP  K
Sbjct: 221 ----LSTKKPSQKKDYVRRLSEPAKMMINHGVSSPARK 254


>ref|XP_002285345.1| PREDICTED: uncharacterized protein LOC100259057 [Vitis vinifera]
          Length = 250

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 49/155 (31%), Positives = 78/155 (50%), Gaps = 2/155 (1%)
 Frame = -3

Query: 791 SSTRDWVPIVVKLKEQKEKKTEIIGKVKNKPASTMNNSEVLDK-PQTGSSVSNEVVQEKT 615
           S++ D VPIVVKL+++K      +  +K+   +  +   V DK P    + +NE  Q   
Sbjct: 80  SNSNDCVPIVVKLRDKK------LENIKDNNVTHHSAQVVDDKFPIEAGAAANEFKQSGL 133

Query: 614 KLERRIKNKSLLSSRHVVVKWRRSHXXXXXXXXXXXXXXXVYGKSFAILCTSIWWYLVP- 438
           + +   K K+  S +  V  WR+                 V+G+S AILCT + WYLVP 
Sbjct: 134 ETDTNTKKKTPFSWKIWVGNWRQPSYYLPAIIIFILFLLTVFGRSVAILCTCLGWYLVPA 193

Query: 437 VMNQKELNSRKSMKKKDYGRWLSENKMVAEGIKSP 333
           +     L+++K  KKK+Y R  S+  +V++G  SP
Sbjct: 194 IKGGSSLDTKKPTKKKEYVRRKSDKMVVSDGSSSP 228


>ref|XP_002301147.1| predicted protein [Populus trichocarpa] gi|222842873|gb|EEE80420.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 3/156 (1%)
 Frame = -3

Query: 791 SSTRDWVPIVVKLKEQKEKKTEI--IGKVKNKPASTMNNSEVLDKPQTGSSVSNEVVQEK 618
           SS+ D +P++VK K+QK+ K     +  VK+KP +  +   V   P    + + +  Q +
Sbjct: 98  SSSNDCIPVIVKAKDQKQDKPRASRVDDVKDKPINHNSTEVVYKLPTQAPAETKQAEQPR 157

Query: 617 TKLERRIKNKSLLSSRHVVVKWRRSHXXXXXXXXXXXXXXXVYGKSFAILCTSIWWYLVP 438
            + +++ + K    S  +  +WRR +                +G+S AIL TS+ WY+VP
Sbjct: 158 LETDKKTEKKCFTWSIKLN-RWRRPYYYMPVAIVLILLLLVFFGRSVAILWTSLGWYIVP 216

Query: 437 VMNQKELNSRKSMKKKDYGRWLSENKMV-AEGIKSP 333
                 L+++K  KKK+  R LSE KMV   G+ SP
Sbjct: 217 T-----LSTKKPSKKKEDVRRLSEPKMVNNHGVSSP 247


>ref|XP_003589063.1| hypothetical protein MTR_1g017990 [Medicago truncatula]
           gi|355478111|gb|AES59314.1| hypothetical protein
           MTR_1g017990 [Medicago truncatula]
          Length = 285

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 7/172 (4%)
 Frame = -3

Query: 791 SSTRDWVPIVVKLKEQKEKKTEIIGKVKNKPASTMNNSEVLDKPQTGSSVSNEVVQEKTK 612
           S+  D+VPIVVK+K  K ++ +++      P ST+  S     P++      E  Q K +
Sbjct: 79  SNKDDFVPIVVKVKN-KSQELKVVKPRNLSPKSTVKKSS----PESSIVAMEERNQPKKR 133

Query: 611 LERRIKN----KSLLSSRHVVVKWRRSHXXXXXXXXXXXXXXXVYGKSFAILCTSIWWYL 444
           +   +KN    K L     VV+                     V+G++ AI+ T I WY+
Sbjct: 134 ISWNMKNNEMEKPLFYLPFVVIM--------------ILVLLTVFGRTAAIIFTCILWYV 179

Query: 443 VPVMNQKELNSRKSMKKKDYGRWLSENKMVA---EGIKSPIVKCFRRGHSNK 297
           +P +  K++ +R S+KKKD+ R LSE KM     EG+     K + RG S K
Sbjct: 180 IPTL--KDIKARNSIKKKDFVRGLSEKKMDVMNNEGVVKK--KDYVRGFSEK 227


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