BLASTX nr result

ID: Coptis24_contig00009105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009105
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301204.1| predicted protein [Populus trichocarpa] gi|2...   219   2e-55
ref|XP_003523589.1| PREDICTED: probable peptide/nitrate transpor...   217   9e-55
ref|XP_003602970.1| Peptide transporter PTR3-A [Medicago truncat...   215   3e-54
ref|XP_003527710.1| PREDICTED: nitrate transporter 1.2-like [Gly...   215   3e-54
ref|XP_002510282.1| nitrate transporter, putative [Ricinus commu...   213   2e-53

>ref|XP_002301204.1| predicted protein [Populus trichocarpa] gi|222842930|gb|EEE80477.1|
           predicted protein [Populus trichocarpa]
          Length = 544

 Score =  219 bits (558), Expect = 2e-55
 Identities = 107/128 (83%), Positives = 119/128 (92%)
 Frame = -1

Query: 384 WHLCTVTQVEETKILIRMLPIIVSTIFMNTCLAQLQTFSVQQSLTMDTSLFGFHVPGPSL 205
           W LCTVTQVEETKILIRMLPII+ST+FMNTCLAQLQTFSVQQS+TMDT +FGF VPGPSL
Sbjct: 277 WRLCTVTQVEETKILIRMLPIILSTVFMNTCLAQLQTFSVQQSITMDTRVFGFQVPGPSL 336

Query: 204 PVIPLVIMAFLVPIYDRVFVPMARKFTGIPTGIRSLQRIGVGLVLSAISMAIAGIMETRR 25
           PVIPL+ M  L+PIY+RVFVP+ARK TGIPTGIR LQR+GVGLVLSAISMA+AGI+ET R
Sbjct: 337 PVIPLLFMFVLIPIYERVFVPLARKITGIPTGIRQLQRVGVGLVLSAISMAVAGIVETSR 396

Query: 24  KSVAVKHN 1
           KSVAV+HN
Sbjct: 397 KSVAVEHN 404


>ref|XP_003523589.1| PREDICTED: probable peptide/nitrate transporter At1g27040-like
           [Glycine max]
          Length = 596

 Score =  217 bits (552), Expect = 9e-55
 Identities = 103/138 (74%), Positives = 124/138 (89%)
 Frame = -1

Query: 414 TTSSQNMTGLWHLCTVTQVEETKILIRMLPIIVSTIFMNTCLAQLQTFSVQQSLTMDTSL 235
           +T ++  +G W LCTVTQVEETKIL+RMLPII+STIFMNTCLAQLQTF++QQS TMDT+L
Sbjct: 324 STGARTTSGPWRLCTVTQVEETKILVRMLPIILSTIFMNTCLAQLQTFTIQQSTTMDTNL 383

Query: 234 FGFHVPGPSLPVIPLVIMAFLVPIYDRVFVPMARKFTGIPTGIRSLQRIGVGLVLSAISM 55
            GF VPGPS+PVIPL+ M  L+P+YDRVFVP+AR+ TGIPTGIR LQRIG+GLVLSA+SM
Sbjct: 384 GGFKVPGPSVPVIPLLFMFVLIPLYDRVFVPLARRITGIPTGIRHLQRIGIGLVLSAVSM 443

Query: 54  AIAGIMETRRKSVAVKHN 1
           A+AG +ETRRKSVA++HN
Sbjct: 444 AVAGFVETRRKSVAIQHN 461


>ref|XP_003602970.1| Peptide transporter PTR3-A [Medicago truncatula]
           gi|355492018|gb|AES73221.1| Peptide transporter PTR3-A
           [Medicago truncatula]
          Length = 568

 Score =  215 bits (548), Expect = 3e-54
 Identities = 102/133 (76%), Positives = 120/133 (90%)
 Frame = -1

Query: 399 NMTGLWHLCTVTQVEETKILIRMLPIIVSTIFMNTCLAQLQTFSVQQSLTMDTSLFGFHV 220
           N TG W+LCTVTQVEETKIL+RMLPII+STIFMNTCLAQLQTFS+QQS T+DT++ GF +
Sbjct: 301 NSTGSWNLCTVTQVEETKILVRMLPIILSTIFMNTCLAQLQTFSIQQSTTLDTNILGFKM 360

Query: 219 PGPSLPVIPLVIMAFLVPIYDRVFVPMARKFTGIPTGIRSLQRIGVGLVLSAISMAIAGI 40
           PGPSLPVIPL+ M  L+P+YDRVFVP+ R+ TGIPTGIR LQRIG+GLVLSAISM +AG 
Sbjct: 361 PGPSLPVIPLLFMFVLIPLYDRVFVPLIRRITGIPTGIRHLQRIGIGLVLSAISMLVAGF 420

Query: 39  METRRKSVAVKHN 1
           +ETRRKSVA++HN
Sbjct: 421 VETRRKSVAIEHN 433


>ref|XP_003527710.1| PREDICTED: nitrate transporter 1.2-like [Glycine max]
          Length = 544

 Score =  215 bits (547), Expect = 3e-54
 Identities = 104/138 (75%), Positives = 122/138 (88%)
 Frame = -1

Query: 414 TTSSQNMTGLWHLCTVTQVEETKILIRMLPIIVSTIFMNTCLAQLQTFSVQQSLTMDTSL 235
           +T +   +G W LCTVTQVEETKILIRMLPIIVSTIFMNTCLAQLQTF++QQS TM+T+L
Sbjct: 274 STGAATNSGPWRLCTVTQVEETKILIRMLPIIVSTIFMNTCLAQLQTFTIQQSTTMNTNL 333

Query: 234 FGFHVPGPSLPVIPLVIMAFLVPIYDRVFVPMARKFTGIPTGIRSLQRIGVGLVLSAISM 55
            GF VPGPS+PVIPL+ M  L+P+YDRVFVP+AR+ TGIPTGIR LQRIG+GLVLSA+SM
Sbjct: 334 GGFKVPGPSVPVIPLMFMFVLIPLYDRVFVPLARRITGIPTGIRHLQRIGIGLVLSAVSM 393

Query: 54  AIAGIMETRRKSVAVKHN 1
           A+AG +ET RKSVA+KHN
Sbjct: 394 AVAGFVETHRKSVAIKHN 411


>ref|XP_002510282.1| nitrate transporter, putative [Ricinus communis]
           gi|223550983|gb|EEF52469.1| nitrate transporter,
           putative [Ricinus communis]
          Length = 545

 Score =  213 bits (541), Expect = 2e-53
 Identities = 100/126 (79%), Positives = 118/126 (93%)
 Frame = -1

Query: 378 LCTVTQVEETKILIRMLPIIVSTIFMNTCLAQLQTFSVQQSLTMDTSLFGFHVPGPSLPV 199
           LCTVTQVEETKIL+RMLPII+ST+FMNTCLAQLQTF+VQQS TMDT+L GFH+PGPS+PV
Sbjct: 279 LCTVTQVEETKILLRMLPIILSTVFMNTCLAQLQTFTVQQSTTMDTNLLGFHIPGPSIPV 338

Query: 198 IPLVIMAFLVPIYDRVFVPMARKFTGIPTGIRSLQRIGVGLVLSAISMAIAGIMETRRKS 19
           IPL+ M  L+PIYDR+FVP+AR+ TGIPTG+R LQRIGVGLVLSAISMA++G++ET RKS
Sbjct: 339 IPLLFMFALIPIYDRIFVPLARRLTGIPTGVRHLQRIGVGLVLSAISMAVSGVVETHRKS 398

Query: 18  VAVKHN 1
           VA+KHN
Sbjct: 399 VAIKHN 404


Top