BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009096
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|2...   246   2e-63
ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su...   244   5e-63
ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, puta...   244   7e-63
sp|O48653.2|DPOLA_ORYSJ RecName: Full=DNA polymerase alpha catal...   240   1e-61
dbj|BAA24573.1| DNA polymerase alpha catalytic subunit [Oryza sa...   240   1e-61

>ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|222853622|gb|EEE91169.1|
            predicted protein [Populus trichocarpa]
          Length = 1312

 Score =  246 bits (627), Expect = 2e-63
 Identities = 125/143 (87%), Positives = 129/143 (90%)
 Frame = -1

Query: 429  RSADGSAPRLPSCKTIGVLPQLLKNLVERRKNAKRWLKTASGLKYQQLDIQQQALKLTAN 250
            RS DG  PRLPS KT GVLP+LLKNLVERR+  K W+K ASGLK QQLDIQQQALKLTAN
Sbjct: 724  RSMDGLVPRLPSSKTTGVLPELLKNLVERRRMVKSWMKNASGLKVQQLDIQQQALKLTAN 783

Query: 249  SMYGCLGFPNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGLD 70
            SMYGCLGF NSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGLD
Sbjct: 784  SMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGLD 843

Query: 69   DIAQAKVIAGKVIQEVNKKYSCL 1
            DI +AK IAGKVIQEVNKKY CL
Sbjct: 844  DIPKAKAIAGKVIQEVNKKYRCL 866


>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
            vinifera]
          Length = 1522

 Score =  244 bits (623), Expect = 5e-63
 Identities = 126/143 (88%), Positives = 129/143 (90%)
 Frame = -1

Query: 429  RSADGSAPRLPSCKTIGVLPQLLKNLVERRKNAKRWLKTASGLKYQQLDIQQQALKLTAN 250
            RS DGS PRLPS KT GVLP+LLK LVERRK  K  LKTASGLK QQLDIQQQALKLTAN
Sbjct: 939  RSPDGSVPRLPSSKTTGVLPELLKKLVERRKTVKSRLKTASGLKVQQLDIQQQALKLTAN 998

Query: 249  SMYGCLGFPNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGLD 70
            SMYGCLGF NSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIY+GLD
Sbjct: 999  SMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYTGLD 1058

Query: 69   DIAQAKVIAGKVIQEVNKKYSCL 1
            DI +AK IAGKVIQEVNKKY CL
Sbjct: 1059 DITKAKAIAGKVIQEVNKKYRCL 1081


>ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis]
            gi|223537171|gb|EEF38804.1| DNA polymerase alpha
            catalytic subunit, putative [Ricinus communis]
          Length = 1526

 Score =  244 bits (622), Expect = 7e-63
 Identities = 123/143 (86%), Positives = 129/143 (90%)
 Frame = -1

Query: 429  RSADGSAPRLPSCKTIGVLPQLLKNLVERRKNAKRWLKTASGLKYQQLDIQQQALKLTAN 250
            +S DG  PRLPS KT GVLP+LLKNLVERR+  K W+K ASGLK QQLDIQQQALKLTAN
Sbjct: 939  KSTDGLVPRLPSIKTTGVLPELLKNLVERRRMVKSWMKNASGLKVQQLDIQQQALKLTAN 998

Query: 249  SMYGCLGFPNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGLD 70
            SMYGCLGF NSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGL+
Sbjct: 999  SMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGLE 1058

Query: 69   DIAQAKVIAGKVIQEVNKKYSCL 1
            DI +AK IAGKVIQEVNKKY CL
Sbjct: 1059 DITKAKAIAGKVIQEVNKKYRCL 1081


>sp|O48653.2|DPOLA_ORYSJ RecName: Full=DNA polymerase alpha catalytic subunit
          Length = 1534

 Score =  240 bits (612), Expect = 1e-61
 Identities = 121/143 (84%), Positives = 131/143 (91%)
 Frame = -1

Query: 429  RSADGSAPRLPSCKTIGVLPQLLKNLVERRKNAKRWLKTASGLKYQQLDIQQQALKLTAN 250
            RSADG+ P LP+ KT GVLP+LLK+LVERR+  K WLKTASGLK QQ DIQQQALKLTAN
Sbjct: 947  RSADGNVPNLPASKTTGVLPELLKSLVERRRMVKSWLKTASGLKRQQFDIQQQALKLTAN 1006

Query: 249  SMYGCLGFPNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGLD 70
            SMYGCLGF NSRFYAKPLAELITLQGREILQ+TVDLVQNNLNLEVIYGDTDSIMI++GLD
Sbjct: 1007 SMYGCLGFSNSRFYAKPLAELITLQGREILQNTVDLVQNNLNLEVIYGDTDSIMIHTGLD 1066

Query: 69   DIAQAKVIAGKVIQEVNKKYSCL 1
            DI++AK IAGKVIQEVNKKY CL
Sbjct: 1067 DISRAKGIAGKVIQEVNKKYRCL 1089


>dbj|BAA24573.1| DNA polymerase alpha catalytic subunit [Oryza sativa]
          Length = 1243

 Score =  240 bits (612), Expect = 1e-61
 Identities = 121/143 (84%), Positives = 131/143 (91%)
 Frame = -1

Query: 429  RSADGSAPRLPSCKTIGVLPQLLKNLVERRKNAKRWLKTASGLKYQQLDIQQQALKLTAN 250
            RSADG+ P LP+ KT GVLP+LLK+LVERR+  K WLKTASGLK QQ DIQQQALKLTAN
Sbjct: 651  RSADGNVPNLPASKTTGVLPELLKSLVERRRMVKSWLKTASGLKRQQFDIQQQALKLTAN 710

Query: 249  SMYGCLGFPNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGLD 70
            SMYGCLGF NSRFYAKPLAELITLQGREILQ+TVDLVQNNLNLEVIYGDTDSIMI++GLD
Sbjct: 711  SMYGCLGFSNSRFYAKPLAELITLQGREILQNTVDLVQNNLNLEVIYGDTDSIMIHTGLD 770

Query: 69   DIAQAKVIAGKVIQEVNKKYSCL 1
            DI++AK IAGKVIQEVNKKY CL
Sbjct: 771  DISRAKGIAGKVIQEVNKKYRCL 793