BLASTX nr result

ID: Coptis24_contig00009095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009095
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21907.3| unnamed protein product [Vitis vinifera]              157   8e-37
ref|XP_002275400.2| PREDICTED: zinc finger protein MAGPIE-like [...   153   2e-35
ref|XP_004170825.1| PREDICTED: zinc finger protein MAGPIE-like [...   139   2e-31
ref|XP_004138788.1| PREDICTED: zinc finger protein MAGPIE-like [...   139   2e-31
ref|XP_002865381.1| zinc finger family protein [Arabidopsis lyra...   137   7e-31

>emb|CBI21907.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score =  157 bits (397), Expect = 8e-37
 Identities = 75/87 (86%), Positives = 78/87 (89%)
 Frame = +1

Query: 220 MLENMAGEAIPNGFTQNSVVVGSNPPITKKKRNLPGNPDPEAEVIALSPKTLMATNRFLC 399
           ML+ MA EAIPNGF QN +  GSNPP  KKKRNLPG PDPEAEVIALSPKTLMATNRFLC
Sbjct: 1   MLQKMAAEAIPNGFIQNPIG-GSNPPTIKKKRNLPGTPDPEAEVIALSPKTLMATNRFLC 59

Query: 400 EICGKGFQRDQNLQLHRRGHNLPWKLR 480
           EICGKGFQRDQNLQLHRRGHNLPWKL+
Sbjct: 60  EICGKGFQRDQNLQLHRRGHNLPWKLK 86


>ref|XP_002275400.2| PREDICTED: zinc finger protein MAGPIE-like [Vitis vinifera]
          Length = 450

 Score =  153 bits (386), Expect = 2e-35
 Identities = 73/83 (87%), Positives = 75/83 (90%)
 Frame = +1

Query: 232 MAGEAIPNGFTQNSVVVGSNPPITKKKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICG 411
           MA EAIPNGF QN +  GSNPP  KKKRNLPG PDPEAEVIALSPKTLMATNRFLCEICG
Sbjct: 1   MAAEAIPNGFIQNPIG-GSNPPTIKKKRNLPGTPDPEAEVIALSPKTLMATNRFLCEICG 59

Query: 412 KGFQRDQNLQLHRRGHNLPWKLR 480
           KGFQRDQNLQLHRRGHNLPWKL+
Sbjct: 60  KGFQRDQNLQLHRRGHNLPWKLK 82


>ref|XP_004170825.1| PREDICTED: zinc finger protein MAGPIE-like [Cucumis sativus]
          Length = 422

 Score =  139 bits (350), Expect = 2e-31
 Identities = 66/87 (75%), Positives = 73/87 (83%)
 Frame = +1

Query: 220 MLENMAGEAIPNGFTQNSVVVGSNPPITKKKRNLPGNPDPEAEVIALSPKTLMATNRFLC 399
           M+E MA +   N F Q  +  GSNP + KKKRNLPG PDPEAEVIALSPKTL+ATNRF+C
Sbjct: 1   MIEKMADDEFSNCFLQIPLT-GSNPSLLKKKRNLPGTPDPEAEVIALSPKTLLATNRFIC 59

Query: 400 EICGKGFQRDQNLQLHRRGHNLPWKLR 480
           EICGKGFQRDQNLQLHRRGHNLPWKL+
Sbjct: 60  EICGKGFQRDQNLQLHRRGHNLPWKLK 86


>ref|XP_004138788.1| PREDICTED: zinc finger protein MAGPIE-like [Cucumis sativus]
          Length = 422

 Score =  139 bits (350), Expect = 2e-31
 Identities = 66/87 (75%), Positives = 73/87 (83%)
 Frame = +1

Query: 220 MLENMAGEAIPNGFTQNSVVVGSNPPITKKKRNLPGNPDPEAEVIALSPKTLMATNRFLC 399
           M+E MA +   N F Q  +  GSNP + KKKRNLPG PDPEAEVIALSPKTL+ATNRF+C
Sbjct: 1   MIEKMADDEFSNCFLQIPLT-GSNPSLLKKKRNLPGTPDPEAEVIALSPKTLLATNRFIC 59

Query: 400 EICGKGFQRDQNLQLHRRGHNLPWKLR 480
           EICGKGFQRDQNLQLHRRGHNLPWKL+
Sbjct: 60  EICGKGFQRDQNLQLHRRGHNLPWKLK 86


>ref|XP_002865381.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297311216|gb|EFH41640.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 464

 Score =  137 bits (346), Expect = 7e-31
 Identities = 65/81 (80%), Positives = 70/81 (86%), Gaps = 5/81 (6%)
 Frame = +1

Query: 253 NGFTQNSVVVGS-----NPPITKKKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKG 417
           +GF Q+S  +       NPP+ KKKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKG
Sbjct: 13  SGFAQSSSTLDHDESLINPPLVKKKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKG 72

Query: 418 FQRDQNLQLHRRGHNLPWKLR 480
           FQRDQNLQLHRRGHNLPWKL+
Sbjct: 73  FQRDQNLQLHRRGHNLPWKLK 93


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