BLASTX nr result

ID: Coptis24_contig00009088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009088
         (1207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302058.1| predicted protein [Populus trichocarpa] gi|2...   544   e-152
ref|XP_003521279.1| PREDICTED: poly [ADP-ribose] polymerase 1-li...   536   e-150
ref|XP_003632422.1| PREDICTED: poly [ADP-ribose] polymerase 1-li...   535   e-150
emb|CBI37089.3| unnamed protein product [Vitis vinifera]              535   e-150
ref|XP_002263185.1| PREDICTED: poly [ADP-ribose] polymerase 1-li...   535   e-150

>ref|XP_002302058.1| predicted protein [Populus trichocarpa] gi|222843784|gb|EEE81331.1|
            predicted protein [Populus trichocarpa]
          Length = 996

 Score =  544 bits (1402), Expect = e-152
 Identities = 269/404 (66%), Positives = 315/404 (77%), Gaps = 2/404 (0%)
 Frame = +1

Query: 1    LKKHVTMTELRAMLEANHSYLKGSEFELRDRCADGMLFGALGPCPICNGPIICSGDQYCC 180
            LKKHVT  ELRA+LEAN     GSE +LRDRCADGM+FGALG CP+C+G +  SG  Y C
Sbjct: 272  LKKHVTTVELRALLEANSQISNGSELDLRDRCADGMVFGALGGCPMCSGSLHYSGGMYRC 331

Query: 181  RGHL-EWGRCSYSTTEVSRLKGKWKVPGETSNEYLTKWFESQKGKKPTRILPPPSPKKAS 357
             G+L EW +CSYST E +RLKGKWK+P +T N+YL KWF+SQK  KP RILPPPS    S
Sbjct: 332  GGYLSEWSKCSYSTREPARLKGKWKIPDDTDNQYLIKWFKSQKRNKPVRILPPPSSNNLS 391

Query: 358  GSQVTKGVSNMLKSEKLEDLKVTISGLTKKSMEDWKSKIEGVGGTIHAKVKKDTTCLVVS 537
            GSQ T   S   KSE L DLKV +SGL K+S+++WK KIE  GG +HAK+KKDT C VVS
Sbjct: 392  GSQATSSQSQSSKSENLGDLKVAVSGLPKESLKEWKGKIEAAGGQLHAKIKKDTNCFVVS 451

Query: 538  GG-GLDDPEVRKARRMKVPVVMDNYLVDCIERKKLLPFDLYKIEAVGVASNSMVTVKVKG 714
            G    +D ++RKARRMK+P+V ++YLVDC +R+K LPFD YK+EA G  S SMVTVKVKG
Sbjct: 452  GVMSSEDADMRKARRMKLPIVREDYLVDCFKRQKKLPFDSYKVEASGGVS-SMVTVKVKG 510

Query: 715  SGAVHESSGLQDSGHILEDGKSIYNTTLNMSDLATGINSYYILQVIQDDKGSDCHVFRKW 894
              AVHE+S +QD+GHILEDGKSIYNTTLNMSDL+TG+NS+YILQ+IQDDK  +C+VFRKW
Sbjct: 511  RSAVHEASAMQDTGHILEDGKSIYNTTLNMSDLSTGVNSFYILQIIQDDKVLECYVFRKW 570

Query: 895  GRVGSETIGGTKLEEMSKSDAIQEFRRLFLEKSGNPWEAWEQKKNFVKQPGKFFPLDIDY 1074
            GRVG+E IGG KLEEMSKSDAI EF+RLFLEK+GNPWEAWEQKK+F K+PG+FFPLDIDY
Sbjct: 571  GRVGNEKIGGNKLEEMSKSDAIHEFKRLFLEKTGNPWEAWEQKKDFQKKPGRFFPLDIDY 630

Query: 1075 GXXXXXXXXXXXXXXXXLLDPQLVELMKMLFDVETYRTAMLEFE 1206
            G                L  P LVELMKMLFDVETYR AM+EFE
Sbjct: 631  GVNRQVTKKTRSDADSKLA-PPLVELMKMLFDVETYRAAMVEFE 673


>ref|XP_003521279.1| PREDICTED: poly [ADP-ribose] polymerase 1-like [Glycine max]
          Length = 997

 Score =  536 bits (1381), Expect = e-150
 Identities = 267/404 (66%), Positives = 315/404 (77%), Gaps = 2/404 (0%)
 Frame = +1

Query: 1    LKKHVTMTELRAMLEANHSYLKGSEFELRDRCADGMLFGALGPCPICNGPIICSGDQYCC 180
            LKKHVT TELR MLEAN     GSE +LRDRCADGM+FGALG CPIC+G +  SG  Y C
Sbjct: 275  LKKHVTTTELREMLEANGQDSSGSEIDLRDRCADGMMFGALGLCPICSGFLRYSGGMYRC 334

Query: 181  RGHL-EWGRCSYSTTEVSRLKGKWKVPGETSNEYLTKWFESQKGKKPTRILPPPSPKKAS 357
             G++ EW +CSYST E +R++GKWK+P ET+N+YL KWF+SQKGKKP RILP PSP+K++
Sbjct: 335  HGYISEWSKCSYSTCEPNRIEGKWKIPEETNNQYLKKWFKSQKGKKPVRILPLPSPRKSA 394

Query: 358  GSQ-VTKGVSNMLKSEKLEDLKVTISGLTKKSMEDWKSKIEGVGGTIHAKVKKDTTCLVV 534
             SQ +     +   SE L DLKV I GL   S+ +WK KI+G+GG  HAKV KDT CLVV
Sbjct: 395  ESQMIASQHHHSSNSENLRDLKVAICGLPNDSIAEWKRKIDGIGGVFHAKVNKDTNCLVV 454

Query: 535  SGGGLDDPEVRKARRMKVPVVMDNYLVDCIERKKLLPFDLYKIEAVGVASNSMVTVKVKG 714
             G   D+ E+RKARRMK P+V ++YL+DCIERKK LPFD+YK+E +G  S SMVT+KVKG
Sbjct: 455  VGSLNDEAEMRKARRMKKPIVREDYLIDCIERKKRLPFDMYKVEMIGETS-SMVTIKVKG 513

Query: 715  SGAVHESSGLQDSGHILEDGKSIYNTTLNMSDLATGINSYYILQVIQDDKGSDCHVFRKW 894
              AVHE+SGLQDSGHILE+GKSIYNTTLNMSDL+TG NSYYILQ+I++DKGSDC+VFRKW
Sbjct: 514  RSAVHEASGLQDSGHILEEGKSIYNTTLNMSDLSTGTNSYYILQIIEEDKGSDCYVFRKW 573

Query: 895  GRVGSETIGGTKLEEMSKSDAIQEFRRLFLEKSGNPWEAWEQKKNFVKQPGKFFPLDIDY 1074
            GRVG++ IGGTKLEEMSKSDAI EF+RLF EK+GNPWEAWEQ K   KQPG+FFPLDIDY
Sbjct: 574  GRVGNDKIGGTKLEEMSKSDAICEFKRLFYEKTGNPWEAWEQ-KTIQKQPGRFFPLDIDY 632

Query: 1075 GXXXXXXXXXXXXXXXXLLDPQLVELMKMLFDVETYRTAMLEFE 1206
            G                 L P L+ELMKMLF+VETYR AM+EFE
Sbjct: 633  GVNKQVPKNKKNDADSK-LPPPLIELMKMLFNVETYRAAMMEFE 675


>ref|XP_003632422.1| PREDICTED: poly [ADP-ribose] polymerase 1-like isoform 2 [Vitis
            vinifera]
          Length = 992

 Score =  535 bits (1379), Expect = e-150
 Identities = 265/405 (65%), Positives = 318/405 (78%), Gaps = 3/405 (0%)
 Frame = +1

Query: 1    LKKHVTMTELRAMLEANHSYLKGSEFELRDRCADGMLFGALGPCPICNGPIICSGDQYCC 180
            LKKHVT  ELR MLEAN     GSE +LRDRCADGMLFGALG CP+C+  +  SG  Y C
Sbjct: 269  LKKHVTTAELREMLEANGQDSTGSELDLRDRCADGMLFGALGHCPLCSSSLRYSGGMYRC 328

Query: 181  RGHLE-WGRCSYSTTEVSRLKGKWKVPGETSNEYLTKWFESQKGKKPTRILPPPSPKKAS 357
            +G+L  W +CSYST E  R+KGKWK+P ETSN+YL KWF+SQKGKKP R++PP S   + 
Sbjct: 329  QGYLSAWSKCSYSTVEPERIKGKWKIPEETSNQYLRKWFKSQKGKKPVRVMPPQSSNVSC 388

Query: 358  GSQVTKGVSNMLKSEKLEDLKVTISGLTKKSMEDWKSKIEGVGGTIHAKVKKDTTCLVVS 537
            G Q     S   KSE L DL+V I+G +K+ + +WKSKIEGVGG+ HAK+K+DT C VV 
Sbjct: 389  GKQAASP-SQSSKSENLSDLRVAIAGYSKQCVGEWKSKIEGVGGSFHAKIKEDTNCFVV- 446

Query: 538  GGGLD--DPEVRKARRMKVPVVMDNYLVDCIERKKLLPFDLYKIEAVGVASNSMVTVKVK 711
            GG LD  D ++R+AR+MK+PV+ ++YLVDC + +K LPFD YKIEA G  S SMVTVKVK
Sbjct: 447  GGMLDAEDAKMRRARKMKLPVLREDYLVDCFKSQKKLPFDKYKIEASGETS-SMVTVKVK 505

Query: 712  GSGAVHESSGLQDSGHILEDGKSIYNTTLNMSDLATGINSYYILQVIQDDKGSDCHVFRK 891
            G  AVHE+SGLQDSGHILEDGKSIYNTTLNMSDL+TG+NSYYILQ+IQ+D+GS+C+VFRK
Sbjct: 506  GRSAVHEASGLQDSGHILEDGKSIYNTTLNMSDLSTGVNSYYILQIIQEDRGSNCYVFRK 565

Query: 892  WGRVGSETIGGTKLEEMSKSDAIQEFRRLFLEKSGNPWEAWEQKKNFVKQPGKFFPLDID 1071
            WGRVG++ IGG KL+EM KSDAIQEF+RLFLEK+GNPWEAWE+K+NF KQPG+FFPLDID
Sbjct: 566  WGRVGNDKIGGNKLDEMPKSDAIQEFKRLFLEKTGNPWEAWERKQNFQKQPGRFFPLDID 625

Query: 1072 YGXXXXXXXXXXXXXXXXLLDPQLVELMKMLFDVETYRTAMLEFE 1206
            YG                 L PQ+VELMKMLF+VETYR+AM+EFE
Sbjct: 626  YGVNKQVSKKNNLSNVNSQLAPQVVELMKMLFNVETYRSAMMEFE 670


>emb|CBI37089.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  535 bits (1379), Expect = e-150
 Identities = 265/405 (65%), Positives = 318/405 (78%), Gaps = 3/405 (0%)
 Frame = +1

Query: 1    LKKHVTMTELRAMLEANHSYLKGSEFELRDRCADGMLFGALGPCPICNGPIICSGDQYCC 180
            LKKHVT  ELR MLEAN     GSE +LRDRCADGMLFGALG CP+C+  +  SG  Y C
Sbjct: 273  LKKHVTTAELREMLEANGQDSTGSELDLRDRCADGMLFGALGHCPLCSSSLRYSGGMYRC 332

Query: 181  RGHLE-WGRCSYSTTEVSRLKGKWKVPGETSNEYLTKWFESQKGKKPTRILPPPSPKKAS 357
            +G+L  W +CSYST E  R+KGKWK+P ETSN+YL KWF+SQKGKKP R++PP S   + 
Sbjct: 333  QGYLSAWSKCSYSTVEPERIKGKWKIPEETSNQYLRKWFKSQKGKKPVRVMPPQSSNVSC 392

Query: 358  GSQVTKGVSNMLKSEKLEDLKVTISGLTKKSMEDWKSKIEGVGGTIHAKVKKDTTCLVVS 537
            G Q     S   KSE L DL+V I+G +K+ + +WKSKIEGVGG+ HAK+K+DT C VV 
Sbjct: 393  GKQAASP-SQSSKSENLSDLRVAIAGYSKQCVGEWKSKIEGVGGSFHAKIKEDTNCFVV- 450

Query: 538  GGGLD--DPEVRKARRMKVPVVMDNYLVDCIERKKLLPFDLYKIEAVGVASNSMVTVKVK 711
            GG LD  D ++R+AR+MK+PV+ ++YLVDC + +K LPFD YKIEA G  S SMVTVKVK
Sbjct: 451  GGMLDAEDAKMRRARKMKLPVLREDYLVDCFKSQKKLPFDKYKIEASGETS-SMVTVKVK 509

Query: 712  GSGAVHESSGLQDSGHILEDGKSIYNTTLNMSDLATGINSYYILQVIQDDKGSDCHVFRK 891
            G  AVHE+SGLQDSGHILEDGKSIYNTTLNMSDL+TG+NSYYILQ+IQ+D+GS+C+VFRK
Sbjct: 510  GRSAVHEASGLQDSGHILEDGKSIYNTTLNMSDLSTGVNSYYILQIIQEDRGSNCYVFRK 569

Query: 892  WGRVGSETIGGTKLEEMSKSDAIQEFRRLFLEKSGNPWEAWEQKKNFVKQPGKFFPLDID 1071
            WGRVG++ IGG KL+EM KSDAIQEF+RLFLEK+GNPWEAWE+K+NF KQPG+FFPLDID
Sbjct: 570  WGRVGNDKIGGNKLDEMPKSDAIQEFKRLFLEKTGNPWEAWERKQNFQKQPGRFFPLDID 629

Query: 1072 YGXXXXXXXXXXXXXXXXLLDPQLVELMKMLFDVETYRTAMLEFE 1206
            YG                 L PQ+VELMKMLF+VETYR+AM+EFE
Sbjct: 630  YGVNKQVSKKNNLSNVNSQLAPQVVELMKMLFNVETYRSAMMEFE 674


>ref|XP_002263185.1| PREDICTED: poly [ADP-ribose] polymerase 1-like isoform 1 [Vitis
            vinifera]
          Length = 984

 Score =  535 bits (1379), Expect = e-150
 Identities = 265/405 (65%), Positives = 318/405 (78%), Gaps = 3/405 (0%)
 Frame = +1

Query: 1    LKKHVTMTELRAMLEANHSYLKGSEFELRDRCADGMLFGALGPCPICNGPIICSGDQYCC 180
            LKKHVT  ELR MLEAN     GSE +LRDRCADGMLFGALG CP+C+  +  SG  Y C
Sbjct: 261  LKKHVTTAELREMLEANGQDSTGSELDLRDRCADGMLFGALGHCPLCSSSLRYSGGMYRC 320

Query: 181  RGHLE-WGRCSYSTTEVSRLKGKWKVPGETSNEYLTKWFESQKGKKPTRILPPPSPKKAS 357
            +G+L  W +CSYST E  R+KGKWK+P ETSN+YL KWF+SQKGKKP R++PP S   + 
Sbjct: 321  QGYLSAWSKCSYSTVEPERIKGKWKIPEETSNQYLRKWFKSQKGKKPVRVMPPQSSNVSC 380

Query: 358  GSQVTKGVSNMLKSEKLEDLKVTISGLTKKSMEDWKSKIEGVGGTIHAKVKKDTTCLVVS 537
            G Q     S   KSE L DL+V I+G +K+ + +WKSKIEGVGG+ HAK+K+DT C VV 
Sbjct: 381  GKQAASP-SQSSKSENLSDLRVAIAGYSKQCVGEWKSKIEGVGGSFHAKIKEDTNCFVV- 438

Query: 538  GGGLD--DPEVRKARRMKVPVVMDNYLVDCIERKKLLPFDLYKIEAVGVASNSMVTVKVK 711
            GG LD  D ++R+AR+MK+PV+ ++YLVDC + +K LPFD YKIEA G  S SMVTVKVK
Sbjct: 439  GGMLDAEDAKMRRARKMKLPVLREDYLVDCFKSQKKLPFDKYKIEASGETS-SMVTVKVK 497

Query: 712  GSGAVHESSGLQDSGHILEDGKSIYNTTLNMSDLATGINSYYILQVIQDDKGSDCHVFRK 891
            G  AVHE+SGLQDSGHILEDGKSIYNTTLNMSDL+TG+NSYYILQ+IQ+D+GS+C+VFRK
Sbjct: 498  GRSAVHEASGLQDSGHILEDGKSIYNTTLNMSDLSTGVNSYYILQIIQEDRGSNCYVFRK 557

Query: 892  WGRVGSETIGGTKLEEMSKSDAIQEFRRLFLEKSGNPWEAWEQKKNFVKQPGKFFPLDID 1071
            WGRVG++ IGG KL+EM KSDAIQEF+RLFLEK+GNPWEAWE+K+NF KQPG+FFPLDID
Sbjct: 558  WGRVGNDKIGGNKLDEMPKSDAIQEFKRLFLEKTGNPWEAWERKQNFQKQPGRFFPLDID 617

Query: 1072 YGXXXXXXXXXXXXXXXXLLDPQLVELMKMLFDVETYRTAMLEFE 1206
            YG                 L PQ+VELMKMLF+VETYR+AM+EFE
Sbjct: 618  YGVNKQVSKKNNLSNVNSQLAPQVVELMKMLFNVETYRSAMMEFE 662


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