BLASTX nr result

ID: Coptis24_contig00009085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009085
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524384.1| conserved hypothetical protein [Ricinus comm...   204   6e-51
ref|XP_003631229.1| PREDICTED: uncharacterized protein LOC100262...   197   1e-48
emb|CAN74875.1| hypothetical protein VITISV_038922 [Vitis vinifera]   197   1e-48
ref|XP_002272298.2| PREDICTED: uncharacterized protein LOC100264...   194   5e-48
emb|CBI15396.3| unnamed protein product [Vitis vinifera]              194   5e-48

>ref|XP_002524384.1| conserved hypothetical protein [Ricinus communis]
           gi|223536345|gb|EEF37995.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 255

 Score =  204 bits (519), Expect = 6e-51
 Identities = 98/126 (77%), Positives = 113/126 (89%), Gaps = 1/126 (0%)
 Frame = +1

Query: 4   TPTSNLIREMASGLVRIALECDKV-QKKGVKLLEESLWRTYCNGKKCGISIRQEFGPEEL 180
           TPTS L+REMASGLVRIALEC+K  QKK  KLL+E +WRTYCNGKKCG ++R+E GPEE 
Sbjct: 130 TPTSVLVREMASGLVRIALECEKKPQKKAGKLLDEPIWRTYCNGKKCGYAMRRECGPEEW 189

Query: 181 KVLKAIGPISMGAGVLPGNGTKADGELMYMRAKFERVIGSRDSEAFYMLNPDGTGGPELS 360
           KVLKA+ PISMGAGVLPGNG  +DGELMYMRA+FERV+GS+DSEAFYM+NPDG+GGPELS
Sbjct: 190 KVLKAVEPISMGAGVLPGNGAGSDGELMYMRARFERVVGSKDSEAFYMMNPDGSGGPELS 249

Query: 361 IYLFRV 378
           +YL RV
Sbjct: 250 VYLLRV 255


>ref|XP_003631229.1| PREDICTED: uncharacterized protein LOC100262757 [Vitis vinifera]
           gi|297737883|emb|CBI27084.3| unnamed protein product
           [Vitis vinifera]
          Length = 262

 Score =  197 bits (500), Expect = 1e-48
 Identities = 99/128 (77%), Positives = 111/128 (86%), Gaps = 3/128 (2%)
 Frame = +1

Query: 4   TPTSNLIREMASGLVRIALECDKV--QKKGVKLLEESLWRTYCNGKKCGISIRQEFGPEE 177
           T TS L+REMASGLVRIALECDK    KKG +LLEE LWRTYCNGKKCG ++++E G EE
Sbjct: 135 TSTSVLVREMASGLVRIALECDKKVEMKKGTRLLEEPLWRTYCNGKKCGYAMKRECGAEE 194

Query: 178 LKVLKAIGPISMGAGVLPGNG-TKADGELMYMRAKFERVIGSRDSEAFYMLNPDGTGGPE 354
            KVLKA+ PISMGAGVLPGNG T ++GELMYMRAKFERV+GS+DSEAFYM+NPD TGGPE
Sbjct: 195 WKVLKAVEPISMGAGVLPGNGETGSEGELMYMRAKFERVVGSKDSEAFYMMNPDSTGGPE 254

Query: 355 LSIYLFRV 378
           LSIYL RV
Sbjct: 255 LSIYLLRV 262


>emb|CAN74875.1| hypothetical protein VITISV_038922 [Vitis vinifera]
          Length = 248

 Score =  197 bits (500), Expect = 1e-48
 Identities = 99/128 (77%), Positives = 111/128 (86%), Gaps = 3/128 (2%)
 Frame = +1

Query: 4   TPTSNLIREMASGLVRIALECDKV--QKKGVKLLEESLWRTYCNGKKCGISIRQEFGPEE 177
           T TS L+REMASGLVRIALECDK    KKG +LLEE LWRTYCNGKKCG ++++E G EE
Sbjct: 121 TSTSVLVREMASGLVRIALECDKKVEMKKGTRLLEEPLWRTYCNGKKCGYAMKRECGAEE 180

Query: 178 LKVLKAIGPISMGAGVLPGNG-TKADGELMYMRAKFERVIGSRDSEAFYMLNPDGTGGPE 354
            KVLKA+ PISMGAGVLPGNG T ++GELMYMRAKFERV+GS+DSEAFYM+NPD TGGPE
Sbjct: 181 WKVLKAVEPISMGAGVLPGNGETGSEGELMYMRAKFERVVGSKDSEAFYMMNPDSTGGPE 240

Query: 355 LSIYLFRV 378
           LSIYL RV
Sbjct: 241 LSIYLLRV 248


>ref|XP_002272298.2| PREDICTED: uncharacterized protein LOC100264587 [Vitis vinifera]
          Length = 269

 Score =  194 bits (494), Expect = 5e-48
 Identities = 98/128 (76%), Positives = 108/128 (84%), Gaps = 3/128 (2%)
 Frame = +1

Query: 4   TPTSNLIREMASGLVRIALECDKVQ-KKGVKLLEESLWRTYCNGKKCGISIRQEFGPEEL 180
           TP S L+REMASGLVRIALECDK + KK V+LLEE LWRTYCNGKKCG + ++E GP+E 
Sbjct: 142 TPISGLVREMASGLVRIALECDKEEEKKSVRLLEEPLWRTYCNGKKCGFATKRECGPKEW 201

Query: 181 KVLKAIGPISMGAGVLPGNG--TKADGELMYMRAKFERVIGSRDSEAFYMLNPDGTGGPE 354
            VLKA+ PISMGAGVLPG G  T +DGELMYMRAKFERVIGSRDSEAFYM+NPD  G PE
Sbjct: 202 NVLKAVEPISMGAGVLPGEGPETGSDGELMYMRAKFERVIGSRDSEAFYMMNPDSNGAPE 261

Query: 355 LSIYLFRV 378
           LSIYL RV
Sbjct: 262 LSIYLLRV 269


>emb|CBI15396.3| unnamed protein product [Vitis vinifera]
          Length = 254

 Score =  194 bits (494), Expect = 5e-48
 Identities = 98/128 (76%), Positives = 108/128 (84%), Gaps = 3/128 (2%)
 Frame = +1

Query: 4   TPTSNLIREMASGLVRIALECDKVQ-KKGVKLLEESLWRTYCNGKKCGISIRQEFGPEEL 180
           TP S L+REMASGLVRIALECDK + KK V+LLEE LWRTYCNGKKCG + ++E GP+E 
Sbjct: 127 TPISGLVREMASGLVRIALECDKEEEKKSVRLLEEPLWRTYCNGKKCGFATKRECGPKEW 186

Query: 181 KVLKAIGPISMGAGVLPGNG--TKADGELMYMRAKFERVIGSRDSEAFYMLNPDGTGGPE 354
            VLKA+ PISMGAGVLPG G  T +DGELMYMRAKFERVIGSRDSEAFYM+NPD  G PE
Sbjct: 187 NVLKAVEPISMGAGVLPGEGPETGSDGELMYMRAKFERVIGSRDSEAFYMMNPDSNGAPE 246

Query: 355 LSIYLFRV 378
           LSIYL RV
Sbjct: 247 LSIYLLRV 254


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