BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009082
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   157   8e-37
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-36
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   156   2e-36
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   154   9e-36
ref|XP_004145529.1| PREDICTED: F-box protein SKIP23-like [Cucumi...   137   9e-31

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  157 bits (397), Expect = 8e-37
 Identities = 87/173 (50%), Positives = 112/173 (64%), Gaps = 4/173 (2%)
 Frame = +3

Query: 3   RNLKDMRDLFIRKIVLSTSPLN-EKCIAVAILNESDELAFCKEESDSWSMIDDARLYSED 179
           R+LK MRD FI+K +LS+SP N    IAV ILN++ +LA C++  DSW+ ++DA+ Y+ED
Sbjct: 152 RSLKKMRDSFIKKTILSSSPANGSDFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYAED 211

Query: 180 VVYHNGMFYAVSKKGGVAVFDLGGNKPVVSFIFPPVKCDGDILYLVVSDTGGIFLVTRYL 359
           V++H G+FYAV+K G +AV D+ G+ P VS I  P +  GD+ YLV S    + LVTRYL
Sbjct: 212 VIFHRGLFYAVNKYGSIAVCDVSGSSPRVSIIEMPQQFGGDLQYLVESGE-ELLLVTRYL 270

Query: 360 NFVSDVEPD---LIYSTVGFDVFELVASDMNWVPVKSLGDRMFFLGGNSSLCL 509
           +   DVEPD   LIY T  F V  L      W  V SLGDR  FLG N SL L
Sbjct: 271 DLTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSL 323


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score =  156 bits (394), Expect = 2e-36
 Identities = 86/175 (49%), Positives = 120/175 (68%), Gaps = 4/175 (2%)
 Frame = +3

Query: 6   NLKDMRDLFIRKIVLSTSPLNEK---CIAVAILNESDELAFCKEESDSWSMIDDARLYSE 176
           +L+ MRD FI+K+V+S+SPL +K    +A+AIL  + +LA+CK   + W++++++R +SE
Sbjct: 155 SLRQMRDGFIKKVVMSSSPLEKKGDFFVAMAILCSTGDLAYCKNGDECWNIVENSRSFSE 214

Query: 177 DVVYHNGMFYAVSKKGGVAVFDLGGNKPVVSFIFPPVKCDGDILYLVVSDTGGIFLVTRY 356
           DV+Y NG+FYAV+K G + V D+ GN P VSFI  P +  GD+ YL VS   G+ LVTRY
Sbjct: 215 DVIYFNGLFYAVNKAGQIVVCDVNGNSPKVSFIETPRQIGGDMQYL-VSSGDGLLLVTRY 273

Query: 357 LNFVSDVEPDL-IYSTVGFDVFELVASDMNWVPVKSLGDRMFFLGGNSSLCLLAS 518
           L+   DVE D+ IY T  F+VF+L  +   W  V SLGD M F+G NSSL L AS
Sbjct: 274 LDL--DVEFDIFIYKTARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSAS 326


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  156 bits (394), Expect = 2e-36
 Identities = 87/173 (50%), Positives = 112/173 (64%), Gaps = 4/173 (2%)
 Frame = +3

Query: 3   RNLKDMRDLFIRKIVLSTSPLN-EKCIAVAILNESDELAFCKEESDSWSMIDDARLYSED 179
           R+LK MRD FI+K +LS+SP N    IAV ILN++ +LA C++  DSW+ ++DA+ YSED
Sbjct: 152 RSLKKMRDSFIKKTILSSSPANGSDFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYSED 211

Query: 180 VVYHNGMFYAVSKKGGVAVFDLGGNKPVVSFIFPPVKCDGDILYLVVSDTGGIFLVTRYL 359
           V++H G+FYAV+K G +AV D+ G+ P VS I  P +  GD+ YLV S    + LVTRYL
Sbjct: 212 VIFHRGLFYAVNKYGSIAVCDVSGSSPRVSIIEMPQQFGGDLQYLVESGE-ELLLVTRYL 270

Query: 360 NFVSDVEPD---LIYSTVGFDVFELVASDMNWVPVKSLGDRMFFLGGNSSLCL 509
           +   DVE D   LIY T  F V  L +    W  V SLGDR  FLG N SL L
Sbjct: 271 DLTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSL 323


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score =  154 bits (388), Expect = 9e-36
 Identities = 80/177 (45%), Positives = 119/177 (67%), Gaps = 6/177 (3%)
 Frame = +3

Query: 6   NLKDMRDLFIRKIVLSTSPLNEK-CIAVAILNESDELAFCKEESDSWSMIDDARLYSEDV 182
           +L+ MRD FIRK+VLS+SPL +   + +AILN++D+LA+C+    SWS++++AR + EDV
Sbjct: 156 SLRQMRDSFIRKVVLSSSPLKDNNFVVIAILNQTDDLAYCRNGDKSWSLVENARSFCEDV 215

Query: 183 VYHNGMFYAVSKKGGVAVFDLGGNKPVVSFIFPPVKCDGDILYLVVSDTGGIFLVTRYLN 362
           ++ NGMFYAV+K G + + D+  + P VSF+  P +  GD+ YLV S    + LVTRYL+
Sbjct: 216 IFVNGMFYAVNKAGQIVICDISSDSPRVSFMETPRQAGGDMQYLVNSG-DELLLVTRYLD 274

Query: 363 FV-----SDVEPDLIYSTVGFDVFELVASDMNWVPVKSLGDRMFFLGGNSSLCLLAS 518
                   D+EP LIY T+ F+VF L  +   W+ + +LGD+  F+G NSSL L A+
Sbjct: 275 LEYEFDHPDMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSAT 331


>ref|XP_004145529.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
           gi|449485151|ref|XP_004157083.1| PREDICTED: F-box
           protein SKIP23-like [Cucumis sativus]
          Length = 392

 Score =  137 bits (345), Expect = 9e-31
 Identities = 80/177 (45%), Positives = 112/177 (63%), Gaps = 5/177 (2%)
 Frame = +3

Query: 3   RNLKDMRDLFIRKIVLSTSPLNEK-CIAVAILNESDELAFCKEESDSWSMIDDARLYSED 179
           RNL+ MRD F++KIVLS+SP N    +AVAILN S +LAFC+    SW+ +DDA    ED
Sbjct: 150 RNLRQMRDSFVKKIVLSSSPSNPNDFLAVAILNHSGDLAFCRSGGGSWTFVDDAPSDCED 209

Query: 180 VVYHNGMFYAVSKKGGVAVFDLGGNKPVVSFIFPPVKCDGDILYLVVSDTGGIFLVTRYL 359
           V+Y +G+FYAV K G V++ DL G++  VS +    +  GDI YLV      + LV+RYL
Sbjct: 210 VIYSDGVFYAVDKYGVVSLMDLRGSRSQVSLVATERQLAGDIQYLVKLGQ-ELLLVSRYL 268

Query: 360 NFVSD-VEPDLI---YSTVGFDVFELVASDMNWVPVKSLGDRMFFLGGNSSLCLLAS 518
           + V+D +E +LI   Y TV F+VF +      W  V++L +   F+GGNSS+   A+
Sbjct: 269 DIVNDGMEDELIPVMYRTVRFEVFRMEWEGPRWEKVENLNEMALFVGGNSSMAFSAA 325