BLASTX nr result
ID: Coptis24_contig00009080
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00009080
(1903 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera] 98 9e-18
ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thalia... 89 3e-15
ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana]... 89 3e-15
ref|NP_191445.1| putative F-box protein [Arabidopsis thaliana] g... 89 5e-15
ref|NP_198675.2| FBD-associated F-box protein [Arabidopsis thali... 87 1e-14
>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
Length = 607
Score = 97.8 bits (242), Expect = 9e-18
Identities = 111/433 (25%), Positives = 180/433 (41%), Gaps = 48/433 (11%)
Frame = +3
Query: 393 DKISGLPDEVLVHILSLVDMKEVMHTSVLSKRWRYLWRSVPSLNFNSHLWRLPNK-GEWD 569
D IS LPDE+L HILS + K + TS+LSKRWRYLW SVP L+F+ LW P+ E +
Sbjct: 10 DIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLVELE 69
Query: 570 IRKEGFMEFVEKTLSLHDGFNVDKFSLYYYNPSDACARIHEWIALAVSRHVQ----HLCL 737
R F FV+ L + + KF L Y + + ++ WI +A+ R VQ HL +
Sbjct: 70 ERIIMFQNFVDGVLRHSEVSCIKKFRLGYRD--NNLDSVYSWICIALERRVQELDLHLLI 127
Query: 738 GHITLLPTWLLGQVTTLELR-----------SVRIPNQMPYXXXXXXXXXXXXXXXILQD 884
LP T + ++ +V +P+ +L
Sbjct: 128 DWRVELPPMFFICKTLVVVKLSCALFLDIPTTVWLPSLKALHLKSVEYSDDDSIQKLLSG 187
Query: 885 CDYLAY---------NTFI--ISAPKLKYMRVV------------NKVCSKIKVCAPSLM 995
C L N ++ +S P LK +R+ K+ V AP+L
Sbjct: 188 CPVLEELVIEREERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDYKVVVDAPNLE 247
Query: 996 LLQFIGEMYEDYSLDNLSSLVTAELCLDCHGSDFLKGRPVKKKKLR-CLNNFLEGICNVQ 1172
L + +DY + +L SLV A + ++ +F + + L I NV+
Sbjct: 248 YLSITDYLSKDYFVKDLPSLVKAFIDVEQDSEEFEESPHNGGISYHGPIYELLGRISNVK 307
Query: 1173 SLTLSTYYFQNWPELFEEWEPIIFHKVKCLKLT-----DWQVDGDIGAIDKLLMCFPNIE 1337
L+L+ + +++ FH + L+ +W + L PN+E
Sbjct: 308 CLSLTGVTLDSLSGTIGDYKLPTFHNMTRLEFLFIGGFNWDF------LPNFLHSSPNLE 361
Query: 1338 TLRFERTVMLSQKGTGSREKSGDQGSLLSV---SCMFPHLKNIEIQNLRRCDNVFNFLEF 1508
L E TG + +G L+ + +C+ HLK IEI+ + D +E+
Sbjct: 362 ALVIE---------TGYTNELIPEGWLMPLQVPACLVLHLKEIEIRRIVGEDYELEAVEY 412
Query: 1509 LVENTLNLESITL 1547
L++N L+ +T+
Sbjct: 413 LLKNAEVLQQMTI 425
>ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
gi|332657973|gb|AEE83373.1| F-box/LRR-repeat protein
[Arabidopsis thaliana]
Length = 443
Score = 89.4 bits (220), Expect = 3e-15
Identities = 102/369 (27%), Positives = 157/369 (42%), Gaps = 49/369 (13%)
Frame = +3
Query: 393 DKISGLPDEVLVHILSLVDMKEVMHTSVLSKRWRYLWRSVPSLNFNSHLWRLPNKGEWDI 572
D IS LPD++ HILS + KE TSVLSK+WRYL+ VP+L+ + ++ P + E +I
Sbjct: 8 DVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNP-ENETEI 66
Query: 573 RKEGFMEFVEKTLSLHDGFNVDKFSLYYYNPSDACARIHEWIALAVSRHVQ----HLCLG 740
FM+FV++ L+L + KFSL + D RI WI + R V HL L
Sbjct: 67 -STSFMDFVDRVLALQGNSPLHKFSLKIGDGIDP-VRIIPWINNVLERGVSDLDLHLNLE 124
Query: 741 HITLLPT---------WL---LGQVTTLELRSVRIP------------NQMPYXXXXXXX 848
LLP+ WL G T+++ V +P +
Sbjct: 125 SEFLLPSQVYLCKTLVWLKLRFGLYPTIDVEDVHLPKLKTLYIEATHFEEHGVGLTKLLS 184
Query: 849 XXXXXXXXILQDCDYLAYNTFIISAPKLKYMRVV----NKVCSKIKVCAPSLMLLQFIGE 1016
+L D + ++ +S P LK +R ++ + + P+L+ L+F
Sbjct: 185 GCPMLEDLVLDDISWFIWDFASVSVPTLKRLRFSWQERDEFPKSVLLDTPNLVYLKFTDT 244
Query: 1017 MYEDYSLDNLSSLVTAELCL-----------DCHGSDFLKGRPVKKKKLRCLNNFLEGIC 1163
+ Y NL SLV A + L +G + + G +F+ IC
Sbjct: 245 VAGKYPKVNLDSLVEAHIDLRLLKPLLINYHQGYGENDMVGN---------ATDFIMRIC 295
Query: 1164 NVQSLTLSTYYFQNWPELFEEWEPI-IFHKVKCLKL-----TDWQVDGDIGAIDKLLMCF 1325
NV++L LS Q L + I IF+ + L + WQ ++ LL
Sbjct: 296 NVKTLYLSANTLQ---VLTYSCDAIPIFNNLTHLTIESNPRVGWQ------SVPGLLKNS 346
Query: 1326 PNIETLRFE 1352
PN+ETL F+
Sbjct: 347 PNLETLIFQ 355
>ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
gi|75245750|sp|Q8L7H1.1|FBL75_ARATH RecName:
Full=F-box/LRR-repeat protein At4g14103
gi|22136642|gb|AAM91640.1| unknown protein [Arabidopsis
thaliana] gi|332657972|gb|AEE83372.1| F-box/LRR-repeat
protein [Arabidopsis thaliana]
Length = 381
Score = 89.4 bits (220), Expect = 3e-15
Identities = 102/369 (27%), Positives = 157/369 (42%), Gaps = 49/369 (13%)
Frame = +3
Query: 393 DKISGLPDEVLVHILSLVDMKEVMHTSVLSKRWRYLWRSVPSLNFNSHLWRLPNKGEWDI 572
D IS LPD++ HILS + KE TSVLSK+WRYL+ VP+L+ + ++ P + E +I
Sbjct: 8 DVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNP-ENETEI 66
Query: 573 RKEGFMEFVEKTLSLHDGFNVDKFSLYYYNPSDACARIHEWIALAVSRHVQ----HLCLG 740
FM+FV++ L+L + KFSL + D RI WI + R V HL L
Sbjct: 67 -STSFMDFVDRVLALQGNSPLHKFSLKIGDGIDP-VRIIPWINNVLERGVSDLDLHLNLE 124
Query: 741 HITLLPT---------WL---LGQVTTLELRSVRIP------------NQMPYXXXXXXX 848
LLP+ WL G T+++ V +P +
Sbjct: 125 SEFLLPSQVYLCKTLVWLKLRFGLYPTIDVEDVHLPKLKTLYIEATHFEEHGVGLTKLLS 184
Query: 849 XXXXXXXXILQDCDYLAYNTFIISAPKLKYMRVV----NKVCSKIKVCAPSLMLLQFIGE 1016
+L D + ++ +S P LK +R ++ + + P+L+ L+F
Sbjct: 185 GCPMLEDLVLDDISWFIWDFASVSVPTLKRLRFSWQERDEFPKSVLLDTPNLVYLKFTDT 244
Query: 1017 MYEDYSLDNLSSLVTAELCL-----------DCHGSDFLKGRPVKKKKLRCLNNFLEGIC 1163
+ Y NL SLV A + L +G + + G +F+ IC
Sbjct: 245 VAGKYPKVNLDSLVEAHIDLRLLKPLLINYHQGYGENDMVGN---------ATDFIMRIC 295
Query: 1164 NVQSLTLSTYYFQNWPELFEEWEPI-IFHKVKCLKL-----TDWQVDGDIGAIDKLLMCF 1325
NV++L LS Q L + I IF+ + L + WQ ++ LL
Sbjct: 296 NVKTLYLSANTLQ---VLTYSCDAIPIFNNLTHLTIESNPRVGWQ------SVPGLLKNS 346
Query: 1326 PNIETLRFE 1352
PN+ETL F+
Sbjct: 347 PNLETLIFQ 355
>ref|NP_191445.1| putative F-box protein [Arabidopsis thaliana]
gi|75264355|sp|Q9LXR6.1|FB207_ARATH RecName:
Full=Putative F-box protein At3g58860
gi|7630081|emb|CAB88303.1| putative protein [Arabidopsis
thaliana] gi|332646320|gb|AEE79841.1| putative F-box
protein [Arabidopsis thaliana]
Length = 457
Score = 88.6 bits (218), Expect = 5e-15
Identities = 95/353 (26%), Positives = 145/353 (41%), Gaps = 36/353 (10%)
Frame = +3
Query: 393 DKISGLPDEVLVHILSLVDMKEVMHTSVLSKRWRYLWRSVPSLNFNSHLWRLPNKG--EW 566
D S LPDEV+ HILS + KE TSVL+K+WRYL+ VPSL+FN + P +G E
Sbjct: 7 DLFSKLPDEVISHILSSLPTKEAASTSVLAKKWRYLFAFVPSLDFNDSDFLHPQEGKREK 66
Query: 567 DIRKEGFMEFVEKTLSLHDGFNVDKFSLYYYNPSDACARIHEWIALAVSRHVQHLCL--- 737
D FM+FV++ L+L + KFSL D R+ WI + R V HL L
Sbjct: 67 DGILRSFMDFVDRVLALQGASPIKKFSLNVKTGVDP-DRVDRWICNVLQRGVSHLALFMD 125
Query: 738 ----------------------GHITLLPTW----LLGQVTTLELRSVRIPNQMPYXXXX 839
G+ L W L + TL L SV
Sbjct: 126 FEEEYSLPYEISVSKTLVELKTGYGVDLYLWDDDMFLPMLKTLVLESVEFGRGQ---FQT 182
Query: 840 XXXXXXXXXXXILQDCDYLAYNTFIISAPKLKYMRVVNK--VCSKIKVCAPSLMLLQFIG 1013
+L + ++ N I+S+ LK +++ ++ + P+L+ L +
Sbjct: 183 LLPACPVLEELMLLNMEWKDRNV-ILSSSSLKNLKITSEDGCLGTLSFDTPNLVFLDYYD 241
Query: 1014 EMYEDYSLDNLSSLVTAELCLDCHGSDFLKGRPVKKKKLRCLNNFLEGICNVQSLTLSTY 1193
+ EDY + NL +LV + L + R + N + GI N + +S
Sbjct: 242 YVAEDYPIVNLKNLVEVGINLVLTADRINRARD-------NVWNLIHGIQNAEIFHISPV 294
Query: 1194 YFQNWP---ELFEEWEPIIFHKVKCLKLTDWQVDGDIGAIDKLLMCFPNIETL 1343
F+ E ++ + ++ + WQ A+ LL PN+ETL
Sbjct: 295 TFEVLSLSCEAMPVFKNLTTLNIRTVMQQGWQ------AMPLLLKNCPNLETL 341
>ref|NP_198675.2| FBD-associated F-box protein [Arabidopsis thaliana]
gi|33589724|gb|AAQ22628.1| At5g38590/MBB18_14
[Arabidopsis thaliana] gi|332006956|gb|AED94339.1|
FBD-associated F-box protein [Arabidopsis thaliana]
Length = 289
Score = 87.4 bits (215), Expect = 1e-14
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 6/145 (4%)
Frame = +3
Query: 393 DKISGLPDEVLVHILSLVDMKEVMHTSVLSKRWRYLWRSVPSLNFNSHLWRLPNKGEWDI 572
DKI+GLPD++LV ILS V + TS+LSKRW +LW +P+L++ S R P D+
Sbjct: 2 DKINGLPDDLLVKILSYVPTDIAVSTSILSKRWEFLWMWLPNLDYTSRWCRKPG----DV 57
Query: 573 RKEGFMEFVEKTLSLHDGFNVDKFSLYYYNPSDACARIHEWIALAVSRHVQHLCLGH--- 743
G +F+ K L LH ++ + +P I WI +AVSRHV L + H
Sbjct: 58 ---GLRDFIHKNLPLHRAPVIESLRFHSNSPDIKPEDIRRWIEIAVSRHVHDLDIDHFSE 114
Query: 744 ---ITLLPTWLLGQVTTLELRSVRI 809
I L + + TL+LRSV +
Sbjct: 115 NENIFLSSFFACKSLVTLKLRSVTL 139