BLASTX nr result

ID: Coptis24_contig00009073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009073
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302928.1| predicted protein [Populus trichocarpa] gi|2...    87   2e-15
ref|XP_002335051.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_002302960.1| cc-nbs-lrr resistance protein [Populus trich...    81   8e-14
ref|XP_002302911.1| cc-nbs-lrr resistance protein [Populus trich...    81   1e-13
ref|XP_002302905.1| nbs-lrr resistance protein [Populus trichoca...    81   1e-13

>ref|XP_002302928.1| predicted protein [Populus trichocarpa] gi|222844654|gb|EEE82201.1|
           predicted protein [Populus trichocarpa]
          Length = 475

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 49/101 (48%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
 Frame = -3

Query: 336 VETLPEAPLRNLTCLQELLINDCDKLRRLPTE-LENFSTIRNLKIWRCGGLKSMTKGLQN 160
           +E+LPE  LRNL  L+ L I  C +L  LP + L   S++R LKI  C    S+T+G+++
Sbjct: 351 LESLPEEGLRNLNSLEVLDIWFCGRLNCLPMDGLCGLSSLRRLKIQYCDKFTSLTEGVRH 410

Query: 159 LTSLSELMVCNCRSLKSLSESSLQHLTALQTLKIWNCPELE 37
           LT+L +L + NC  L SL ES +QHLT+LQ+L IW CP LE
Sbjct: 411 LTALEDLELGNCPELNSLPES-IQHLTSLQSLSIWKCPNLE 450



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 48/114 (42%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
 Frame = -3

Query: 336 VETLPEAPLRNLTCLQELLINDCDKLRRLPTE-LENFSTIRNLKIWRCGGLKSMTK-GLQ 163
           +E+L    L NL+ L+ L I  C KL  LP E L N +++  L IW CG L  +   GL 
Sbjct: 326 LESLSNRVLDNLSALKSLSIWGCGKLESLPEEGLRNLNSLEVLDIWFCGRLNCLPMDGLC 385

Query: 162 NLTSLSELMVCNCRSLKSLSESSLQHLTALQTLKIWNCPELEIMSVDFQHLISL 1
            L+SL  L +  C    SL+E  ++HLTAL+ L++ NCPEL  +    QHL SL
Sbjct: 386 GLSSLRRLKIQYCDKFTSLTEG-VRHLTALEDLELGNCPELNSLPESIQHLTSL 438


>ref|XP_002335051.1| predicted protein [Populus trichocarpa] gi|222832701|gb|EEE71178.1|
           predicted protein [Populus trichocarpa]
          Length = 153

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 45/101 (44%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
 Frame = -3

Query: 336 VETLPEAPLRNLTCLQELLINDCDKLRRLPTE-LENFSTIRNLKIWRCGGLKSMTKGLQN 160
           +E+LPE  LRNL  L+ L+I DC +L  LP   L   S++R L I  C    S+++G+++
Sbjct: 29  LESLPEEGLRNLNSLEFLMIFDCGRLNCLPMNGLCGLSSLRRLNIQYCDKFTSLSEGVRH 88

Query: 159 LTSLSELMVCNCRSLKSLSESSLQHLTALQTLKIWNCPELE 37
           LT+L +L +  C  L SL ES +QHLT+L++L IW+CP L+
Sbjct: 89  LTALEDLWLSECPELNSLPES-IQHLTSLRSLTIWDCPNLK 128



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 47/114 (41%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
 Frame = -3

Query: 336 VETLPEAPLRNLTCLQELLINDCDKLRRLPTE-LENFSTIRNLKIWRCGGLKSMT-KGLQ 163
           +E+L    L NL+ L+ L I +C KL  LP E L N +++  L I+ CG L  +   GL 
Sbjct: 4   LESLSNRVLDNLSSLKRLSIWECGKLESLPEEGLRNLNSLEFLMIFDCGRLNCLPMNGLC 63

Query: 162 NLTSLSELMVCNCRSLKSLSESSLQHLTALQTLKIWNCPELEIMSVDFQHLISL 1
            L+SL  L +  C    SLSE  ++HLTAL+ L +  CPEL  +    QHL SL
Sbjct: 64  GLSSLRRLNIQYCDKFTSLSEG-VRHLTALEDLWLSECPELNSLPESIQHLTSL 116


>ref|XP_002302960.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844686|gb|EEE82233.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1091

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 46/112 (41%), Positives = 68/112 (60%)
 Frame = -3

Query: 336  VETLPEAPLRNLTCLQELLINDCDKLRRLPTELENFSTIRNLKIWRCGGLKSMTKGLQNL 157
            +E+LPE  LRNL  L+ L IN C +L  LP  +   S++R L I  C    S+++G+++L
Sbjct: 919  LESLPEEGLRNLNSLEVLSINGCGRLNSLP--MNCLSSLRRLSIKYCDQFASLSEGVRHL 976

Query: 156  TSLSELMVCNCRSLKSLSESSLQHLTALQTLKIWNCPELEIMSVDFQHLISL 1
            T+L +L +  C  L SL ES +QHLT+L++L IW C  L  +     +L SL
Sbjct: 977  TALEDLSLFGCPELNSLPES-IQHLTSLRSLSIWYCKGLTSLPYQIGYLTSL 1027



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
 Frame = -3

Query: 336  VETLPEAPLRNLTCLQELLINDCDKLRRLPTE-LENFSTIRNLKIWRCGGLKSMTKGLQN 160
            +++L    L NL+ L+ L I  CD+L  LP E L N +++  L I  CG L S+   +  
Sbjct: 894  MQSLSNNVLDNLSSLKTLSITACDELESLPEEGLRNLNSLEVLSINGCGRLNSLP--MNC 951

Query: 159  LTSLSELMVCNCRSLKSLSESSLQHLTALQTLKIWNCPELEIMSVDFQHLISL 1
            L+SL  L +  C    SLSE  ++HLTAL+ L ++ CPEL  +    QHL SL
Sbjct: 952  LSSLRRLSIKYCDQFASLSEG-VRHLTALEDLSLFGCPELNSLPESIQHLTSL 1003



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 35/92 (38%), Positives = 55/92 (59%)
 Frame = -3

Query: 312  LRNLTCLQELLINDCDKLRRLPTELENFSTIRNLKIWRCGGLKSMTKGLQNLTSLSELMV 133
            +R+LT L++L +  C +L  LP  +++ +++R+L IW C GL S+   +  LTSLS L +
Sbjct: 973  VRHLTALEDLSLFGCPELNSLPESIQHLTSLRSLSIWYCKGLTSLPYQIGYLTSLSSLKI 1032

Query: 132  CNCRSLKSLSESSLQHLTALQTLKIWNCPELE 37
              C +L S  +  +Q L+ L  L I  CP LE
Sbjct: 1033 RGCPNLMSFPD-GVQSLSKLSKLTIDECPNLE 1063


>ref|XP_002302911.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844637|gb|EEE82184.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1053

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 46/101 (45%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
 Frame = -3

Query: 336  VETLPEAPLRNLTCLQELLINDCDKLRRLPTE-LENFSTIRNLKIWRCGGLKSMTKGLQN 160
            +E+LPE  LRNL  L+ L I+ C +L  LP   L   S++R L I  C    S+++G+++
Sbjct: 931  LESLPEEGLRNLNSLEVLRISFCGRLNCLPMNGLCGLSSLRKLVIVDCDKFTSLSEGVRH 990

Query: 159  LTSLSELMVCNCRSLKSLSESSLQHLTALQTLKIWNCPELE 37
            L  L +L + NC  L SL ES +QHLT+LQ+L IW+CP LE
Sbjct: 991  LRVLEDLDLVNCPELNSLPES-IQHLTSLQSLTIWDCPNLE 1030



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 47/114 (41%), Positives = 66/114 (57%), Gaps = 2/114 (1%)
 Frame = -3

Query: 336  VETLPEAPLRNLTCLQELLINDCDKLRRLPTE-LENFSTIRNLKIWRCGGLKSMT-KGLQ 163
            +E+L    L NL+ L+ L I DC KL  LP E L N +++  L+I  CG L  +   GL 
Sbjct: 906  LESLSNRVLDNLSALKSLKIGDCGKLESLPEEGLRNLNSLEVLRISFCGRLNCLPMNGLC 965

Query: 162  NLTSLSELMVCNCRSLKSLSESSLQHLTALQTLKIWNCPELEIMSVDFQHLISL 1
             L+SL +L++ +C    SLSE  ++HL  L+ L + NCPEL  +    QHL SL
Sbjct: 966  GLSSLRKLVIVDCDKFTSLSEG-VRHLRVLEDLDLVNCPELNSLPESIQHLTSL 1018


>ref|XP_002302905.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844631|gb|EEE82178.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 968

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 46/101 (45%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
 Frame = -3

Query: 336  VETLPEAPLRNLTCLQELLINDCDKLRRLPTE-LENFSTIRNLKIWRCGGLKSMTKGLQN 160
            +E+LPE  LRNL  L+ L I+ C +L  LP   L   S++R L I  C    S+++G+++
Sbjct: 846  LESLPEEGLRNLNSLEVLRISFCGRLNCLPMNGLCGLSSLRKLVIVDCDKFTSLSEGVRH 905

Query: 159  LTSLSELMVCNCRSLKSLSESSLQHLTALQTLKIWNCPELE 37
            L  L +L + NC  L SL ES +QHLT+LQ+L IW+CP LE
Sbjct: 906  LRVLEDLDLVNCPELNSLPES-IQHLTSLQSLTIWDCPNLE 945



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 47/114 (41%), Positives = 66/114 (57%), Gaps = 2/114 (1%)
 Frame = -3

Query: 336  VETLPEAPLRNLTCLQELLINDCDKLRRLPTE-LENFSTIRNLKIWRCGGLKSMT-KGLQ 163
            +E+L    L NL+ L+ L I DC KL  LP E L N +++  L+I  CG L  +   GL 
Sbjct: 821  LESLSNRVLDNLSALKSLKIGDCGKLESLPEEGLRNLNSLEVLRISFCGRLNCLPMNGLC 880

Query: 162  NLTSLSELMVCNCRSLKSLSESSLQHLTALQTLKIWNCPELEIMSVDFQHLISL 1
             L+SL +L++ +C    SLSE  ++HL  L+ L + NCPEL  +    QHL SL
Sbjct: 881  GLSSLRKLVIVDCDKFTSLSEG-VRHLRVLEDLDLVNCPELNSLPESIQHLTSL 933


Top