BLASTX nr result

ID: Coptis24_contig00009063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009063
         (1703 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277342.1| PREDICTED: SNF1-related protein kinase regul...   100   1e-18
emb|CAN74704.1| hypothetical protein VITISV_029225 [Vitis vinifera]   100   1e-18
ref|XP_004135193.1| PREDICTED: SNF1-related protein kinase regul...   100   2e-18
ref|NP_564975.2| Cystathionine beta-synthase (CBS) protein [Arab...    97   1e-17
ref|XP_002520125.1| AMP-activated protein kinase, gamma regulato...    97   1e-17

>ref|XP_002277342.1| PREDICTED: SNF1-related protein kinase regulatory subunit
            gamma-1-like [Vitis vinifera]
            gi|296086419|emb|CBI32008.3| unnamed protein product
            [Vitis vinifera]
          Length = 444

 Score =  100 bits (249), Expect = 1e-18
 Identities = 51/95 (53%), Positives = 61/95 (64%)
 Frame = -1

Query: 1688 PTRIGKVKQIIKSFRWAPFLPVATDIXXXXXXXXXXXXXXXXVPIIETGNPFVKNFITQS 1509
            P +   V+ I+KS+R APFLPVATD                 VP+IE G PFVKN+ITQS
Sbjct: 199  PFKSTTVQSILKSYRSAPFLPVATDSSMLSVLLLLSKYRMRNVPVIEPGQPFVKNYITQS 258

Query: 1508 AVVQILQQCKGRDWFDYIAGRPIFDFGLPLTSYEE 1404
            A+VQ L++CKGRDWFD IA  PI D GLP  S+ E
Sbjct: 259  AIVQGLERCKGRDWFDCIAAHPISDLGLPFMSHNE 293


>emb|CAN74704.1| hypothetical protein VITISV_029225 [Vitis vinifera]
          Length = 355

 Score =  100 bits (249), Expect = 1e-18
 Identities = 52/95 (54%), Positives = 62/95 (65%)
 Frame = -1

Query: 1688 PTRIGKVKQIIKSFRWAPFLPVATDIXXXXXXXXXXXXXXXXVPIIETGNPFVKNFITQS 1509
            P +   V+ I+KS+R APFLPVATD                 VP+IE G PFVKN+ITQS
Sbjct: 199  PFKSTTVQSILKSYRSAPFLPVATDSSXLSVLLLLSKYRMRNVPVIEPGQPFVKNYITQS 258

Query: 1508 AVVQILQQCKGRDWFDYIAGRPIFDFGLPLTSYEE 1404
            A+VQ L++CKGRDWFD IA  PI D GLP  S+ E
Sbjct: 259  AIVQGLERCKGRDWFDCIAAHPISDLGLPFMSHNE 293


>ref|XP_004135193.1| PREDICTED: SNF1-related protein kinase regulatory subunit
            gamma-1-like [Cucumis sativus]
            gi|449478452|ref|XP_004155322.1| PREDICTED: SNF1-related
            protein kinase regulatory subunit gamma-1-like [Cucumis
            sativus]
          Length = 442

 Score =  100 bits (248), Expect = 2e-18
 Identities = 50/95 (52%), Positives = 61/95 (64%)
 Frame = -1

Query: 1688 PTRIGKVKQIIKSFRWAPFLPVATDIXXXXXXXXXXXXXXXXVPIIETGNPFVKNFITQS 1509
            P +   V+ I+KS+RWAPFLPV  D                 VP+IE+G P +KN+ITQS
Sbjct: 198  PFKSTTVEMILKSYRWAPFLPVTLDNSMLCVLLLLSKYRLRNVPVIESGKPEIKNYITQS 257

Query: 1508 AVVQILQQCKGRDWFDYIAGRPIFDFGLPLTSYEE 1404
            AVVQ L++CKGRDWFD IA RPI D GLP  S +E
Sbjct: 258  AVVQGLERCKGRDWFDCIAARPISDLGLPFVSCKE 292


>ref|NP_564975.2| Cystathionine beta-synthase (CBS) protein [Arabidopsis thaliana]
            gi|75262290|sp|Q9CAR3.1|KINGL_ARATH RecName:
            Full=SNF1-related protein kinase regulatory subunit
            gamma-1-like; AltName: Full=AKIN subunit gamma-1-like;
            AltName: Full=CBS domain-containing protein CBSCBS2
            gi|12325233|gb|AAG52563.1|AC010675_11 hypothetical
            protein; 77242-78931 [Arabidopsis thaliana]
            gi|190684768|gb|ACE82595.1| At1g69800 [Arabidopsis
            thaliana] gi|222424344|dbj|BAH20128.1| AT1G69800
            [Arabidopsis thaliana] gi|332196855|gb|AEE34976.1|
            Cystathionine beta-synthase (CBS) protein [Arabidopsis
            thaliana]
          Length = 447

 Score = 97.1 bits (240), Expect = 1e-17
 Identities = 49/101 (48%), Positives = 64/101 (63%)
 Frame = -1

Query: 1688 PTRIGKVKQIIKSFRWAPFLPVATDIXXXXXXXXXXXXXXXXVPIIETGNPFVKNFITQS 1509
            P +   V+ I+KSFRWAPFLPV+T+                 VP+I+TG P +KN++TQS
Sbjct: 202  PFKSTTVRTILKSFRWAPFLPVSTESSMLSVMLLLSKYRLRNVPVIKTGEPDIKNYVTQS 261

Query: 1508 AVVQILQQCKGRDWFDYIAGRPIFDFGLPLTSYEEELIGVE 1386
            AVV  L+ CKGRDWFD+I+  PI D GLP  S   E+I +E
Sbjct: 262  AVVHGLEGCKGRDWFDHISALPISDLGLPFMS-PNEVISIE 301


>ref|XP_002520125.1| AMP-activated protein kinase, gamma regulatory subunit, putative
            [Ricinus communis] gi|223540617|gb|EEF42180.1|
            AMP-activated protein kinase, gamma regulatory subunit,
            putative [Ricinus communis]
          Length = 443

 Score = 97.1 bits (240), Expect = 1e-17
 Identities = 49/95 (51%), Positives = 59/95 (62%)
 Frame = -1

Query: 1688 PTRIGKVKQIIKSFRWAPFLPVATDIXXXXXXXXXXXXXXXXVPIIETGNPFVKNFITQS 1509
            P +   V+ ++KS+RWAPFL VATD                 VP++E G   V+NFITQS
Sbjct: 199  PFKSTTVRSVLKSYRWAPFLAVATDSSMLSVLLLLSKYRLRNVPVVEPGKTDVQNFITQS 258

Query: 1508 AVVQILQQCKGRDWFDYIAGRPIFDFGLPLTSYEE 1404
            A+VQ L+ CKGRDWFD IA RPI DFGLP  S  E
Sbjct: 259  AIVQGLEGCKGRDWFDCIAARPISDFGLPFMSANE 293


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