BLASTX nr result
ID: Coptis24_contig00009042
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00009042
(1893 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270511.1| PREDICTED: uncharacterized protein LOC100244... 471 e-130
ref|XP_002526559.1| transcription factor, putative [Ricinus comm... 430 e-118
ref|XP_003554298.1| PREDICTED: uncharacterized protein LOC100810... 386 e-105
ref|XP_003625354.1| Two-component response regulator ARR [Medica... 382 e-103
gb|AFK35281.1| unknown [Medicago truncatula] 380 e-103
>ref|XP_002270511.1| PREDICTED: uncharacterized protein LOC100244545 [Vitis vinifera]
Length = 517
Score = 471 bits (1212), Expect = e-130
Identities = 271/518 (52%), Positives = 336/518 (64%), Gaps = 18/518 (3%)
Frame = +3
Query: 168 MEAHPSLTIQRSVTKQARSMGVSGFMSSSLPVLPTPLEEKYPKLSHSQKVCFDRELTADP 347
MEAH +L+I+ S +KQ ++G SG +SSSL VLPT LEE +PKL SQ+V RE+ P
Sbjct: 1 MEAHSTLSIRGSGSKQLNNLGASGALSSSLSVLPTSLEETHPKLPDSQQVYVGREIMTRP 60
Query: 348 VALHSTPSAYNGGVVGHLLSSTSGFSTDLHSSSASTHERYLTKSPFISQSSQDCASYPLT 527
A+H++P N G VGH+ SS+SG+STDLH SS S HER+ +PFISQSS + S PL
Sbjct: 61 QAMHASPLPSNSGAVGHIFSSSSGYSTDLHFSSVSPHERHSRSAPFISQSSSNGTSLPLA 120
Query: 528 HSSQSGIVQCTSSSNFGKENNNVSWSSVTPQSVHDFNGNIPDQNSQNES--SDHAIPTED 701
HSS SG +Q T+SS++ +ENNN SW + + DF N P Q+SQ ES + I +ED
Sbjct: 121 HSSHSGQLQSTASSHYIEENNNASWCTDSLSGFLDFPVNTPVQSSQIESRSASGVIASED 180
Query: 702 HXXXXXXXXXXXXLITDEDTSPPDWNELLVDTHIVDTLPKMAHQTPKRSSKISVRQPQNH 881
LITD+D +WNE LVDT++ D PKMA+Q PK SS S QPQ H
Sbjct: 181 LSKRHDWQEWADQLITDDDALNSNWNEFLVDTNVADVEPKMAYQVPKPSSNFSANQPQVH 240
Query: 882 QQLSV-SEELCAVACPLSSISGSSIKPRMRWTPELHECFVQAVSQLGGSERATPKGVLKL 1058
QLS S E+ V P SS++ + KPRMRWTPELHE FV+AV+QLGGSERATPKGVLKL
Sbjct: 241 PQLSAPSGEVHNVVTPSSSVNTAPTKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKL 300
Query: 1059 MNVKGLTIYHVKSHLQKYRTARYRPXXXXXXXXXXXXAAEEMSSVHSKTGIEISEALRLQ 1238
M V+GLTIYHVKSHLQKYRTARYRP + EEMSS+ KTGIEI+EALRLQ
Sbjct: 301 MKVEGLTIYHVKSHLQKYRTARYRPESSEGSSEKRLTSIEEMSSLDLKTGIEITEALRLQ 360
Query: 1239 MEVQKRLHEQLEIQRNLQLRIEEQGKVLQMIFEQQCKAADDKLKTSTLIREDPSSLNLEP 1418
MEVQKRLHEQLEIQRNLQLRIEEQG+ LQM+FE+QCK+ DKLKTS+ E+PSSL+ +
Sbjct: 361 MEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKSGIDKLKTSSSALENPSSLSSDT 420
Query: 1419 TQQLPSTKTEAEVVEKDHDTEHGTVDVKDKANENSS--------TCTEKQKTLASEVIEV 1574
P+ K+E E +HD + GT V D + + E + L SE I +
Sbjct: 421 IPNSPA-KSEMEASHDEHD-KTGTDLVNDSKTSSGNPQKLSREQNAIETEALLGSEQIAI 478
Query: 1575 -------FEPDVDEGSDAPPKKRAKTDDTASPSAKLGS 1667
E D S++ P KRAK D+++ S K S
Sbjct: 479 EPEAPRNVEQDAACESNSQPSKRAKVDESSISSVKSAS 516
>ref|XP_002526559.1| transcription factor, putative [Ricinus communis]
gi|223534120|gb|EEF35837.1| transcription factor,
putative [Ricinus communis]
Length = 491
Score = 430 bits (1105), Expect = e-118
Identities = 255/493 (51%), Positives = 311/493 (63%), Gaps = 4/493 (0%)
Frame = +3
Query: 168 MEAHPSLTIQRSVTKQARSMGVSGFMSSSLPVLPTPLEEKYPKLSHSQKVCFDRELTADP 347
MEA P+L+IQRS KQ ++GVSG +SSS PVLPT EE YPKLS +Q+V ++ L P
Sbjct: 1 MEARPTLSIQRSGVKQLSNLGVSGALSSSYPVLPTSREETYPKLSDAQQVAMEKGLMTRP 60
Query: 348 VALHSTPSAYNGGVVGHLLSSTSGFSTDLHSSSASTHERYLTKSPFISQSSQDCASYPLT 527
+ +H+ N GVVGHL SS++GFSTDL SS S E++ +PFISQS + A+ L
Sbjct: 61 L-VHTNHLPSNNGVVGHLFSSSAGFSTDLQYSSVSPQEKHSRNTPFISQSPTNVAALTLP 119
Query: 528 HSSQSGIVQCTSSSNFGKENNNVSWSSVTPQSVHDFNGNIPDQNSQNESSD--HAIPTED 701
S SG++QCT+SS + KEN+ SW + DF N QN+Q ES+ AI +E+
Sbjct: 120 QSPHSGLLQCTASSQYDKENS-ASWCPESLPGFLDFPVNSHVQNNQIESNSCTGAITSEE 178
Query: 702 HXXXXXXXXXXXXLITDEDTSPPDWNELLVDTHIVDTLPKMAHQTPKRSSKISVRQPQNH 881
LITD+D +WN+LLVD + PKMA+Q K S IS QPQ H
Sbjct: 179 FSKRNDWQEWADQLITDDDALTSNWNDLLVDNSAPEMEPKMAYQVSKPPSDISAHQPQVH 238
Query: 882 QQLSV-SEELCAVACPLSSISGSSIKPRMRWTPELHECFVQAVSQLGGSERATPKGVLKL 1058
QQL S ++ V P SS++ + KPRMRWTPELHE FV AV+QLGGSERATPKGVLKL
Sbjct: 239 QQLPAPSIDIRPVLTPTSSVNTAPSKPRMRWTPELHEAFVDAVNQLGGSERATPKGVLKL 298
Query: 1059 MNVKGLTIYHVKSHLQKYRTARYRPXXXXXXXXXXXXAAEEMSSVHSKTGIEISEALRLQ 1238
M V+GLTIYHVKSHLQKYRTARYRP EE+SS+ KTGIEI+EALRLQ
Sbjct: 299 MKVEGLTIYHVKSHLQKYRTARYRPDSLEGSSEQKLTPLEEISSLDLKTGIEITEALRLQ 358
Query: 1239 MEVQKRLHEQLEIQRNLQLRIEEQGKVLQMIFEQQCKAADDKLKTSTLIREDPSSLNLEP 1418
MEVQKRLHEQLEIQRNLQLRIEEQG+ LQM+FE+QCK+ D LK S+ E+PSS
Sbjct: 359 MEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKSGTDVLKASSSAVENPSSALSSD 418
Query: 1419 TQQLPSTKTEAEVVEKDH-DTEHGTVDVKDKANENSSTCTEKQKTLASEVIEVFEPDVDE 1595
S K E E + DH + T D K K E S EK+K L E EPD E
Sbjct: 419 AVHDSSGKNEMEASKVDHGNAITNTDDTKSKLEERSQDPNEKKKALQIEASGNPEPDNGE 478
Query: 1596 GSDAPPKKRAKTD 1634
S++ KR + D
Sbjct: 479 -SNSQSAKRPRLD 490
>ref|XP_003554298.1| PREDICTED: uncharacterized protein LOC100810560 [Glycine max]
Length = 484
Score = 386 bits (992), Expect = e-105
Identities = 244/499 (48%), Positives = 309/499 (61%), Gaps = 9/499 (1%)
Frame = +3
Query: 168 MEAHPSLTIQRSVTKQARSMGVSGFMSSSLPVLPTPLEEKYPKLSHSQKVCFDRELTADP 347
MEA + +I RS KQ +MG+S SSLP LP+PLEE YPKLS S+ V ++EL P
Sbjct: 1 MEARSAFSIDRSNAKQLNNMGMSEAFPSSLPALPSPLEETYPKLSDSKPVFMEKELKTKP 60
Query: 348 VALHSTPSAYNGGVVGHLLSSTSGFSTDLHSSSASTHERYLTKSPFISQSSQDCASYPLT 527
HS+ + G VGH+ SS+ G+STDLH SS S+HE+ + FISQS + AS PL+
Sbjct: 61 YT-HSSHLT-SSGAVGHMFSSSPGYSTDLHHSSFSSHEKQPRNTHFISQSLSNMASLPLS 118
Query: 528 HSSQSGIVQCTSSSNFGKENNNVSWSSVTPQSVHDFNGNIPDQNSQNESSD-HAIPTEDH 704
+SS S + T+S+ + N+VSW + + S DF N NSQ ESSD + + TE++
Sbjct: 119 YSSNSEPIPSTTSTPYSN-GNSVSWHTDSLPSFLDFPANTSIGNSQVESSDCNIMATEEY 177
Query: 705 XXXXXXXXXXXXLITDEDTSPPDWNELLVDTHIVDTLPKMAHQTPKRSSKISV-RQPQNH 881
LI+D D +WN+LL D +I D PK+A K SS++ + Q Q+H
Sbjct: 178 SKRNDWQEWADQLISDVDPLTSNWNDLLAD-NIQDLEPKVA----KSSSQLPIGHQSQSH 232
Query: 882 QQLSVS--EELCAVACPLSSISGSSIKPRMRWTPELHECFVQAVSQLGGSERATPKGVLK 1055
QQL S E VA P SS + + KPRMRWTPELHE FV+AV+QLGGSERATPKGVLK
Sbjct: 233 QQLPASSGENRVGVA-PTSSTNSAPAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLK 291
Query: 1056 LMNVKGLTIYHVKSHLQKYRTARYRPXXXXXXXXXXXXAAEEMSSVHSKTGIEISEALRL 1235
LM V GLTIYHVKSHLQKYRTARYRP EEMSS+ KTGIEI+EALRL
Sbjct: 292 LMKVDGLTIYHVKSHLQKYRTARYRPESSEGAAEKKLSPIEEMSSLDLKTGIEITEALRL 351
Query: 1236 QMEVQKRLHEQLEIQRNLQLRIEEQGKVLQMIFEQQCKAADDKLKTSTLIREDPSSLNLE 1415
QMEVQKRLHEQLEIQRNLQLRIEEQG+ LQM+FE+QCK + K S+ E S ++ +
Sbjct: 352 QMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKPGIETFKASSSAIESQSGVSSD 411
Query: 1416 PTQQLPSTKTEAEVVEKDH-----DTEHGTVDVKDKANENSSTCTEKQKTLASEVIEVFE 1580
+ P+ KTE+E ++ DH D +G V++ A E EKQ S+ E E
Sbjct: 412 AIKDSPA-KTESETIKVDHCKSGADQANGITTVEESALE----VGEKQDAPESQASENPE 466
Query: 1581 PDVDEGSDAPPKKRAKTDD 1637
E S A KR +T++
Sbjct: 467 QHASEDS-AKASKRPRTEE 484
>ref|XP_003625354.1| Two-component response regulator ARR [Medicago truncatula]
gi|355500369|gb|AES81572.1| Two-component response
regulator ARR [Medicago truncatula]
Length = 489
Score = 382 bits (982), Expect = e-103
Identities = 229/499 (45%), Positives = 308/499 (61%), Gaps = 9/499 (1%)
Frame = +3
Query: 168 MEAHPSLTIQRSVTKQARSMGVSGFMSSSLPVLPTPLEEKYPKLSHSQKVCFDRELTADP 347
MEA P+ +I+RS ++Q ++G+SG + SSL V PTPLEE YP+ S SQ +++L
Sbjct: 1 MEARPAFSIERSSSQQLNNIGMSGALPSSLSVHPTPLEETYPRFSDSQPTYVEKDLKTK- 59
Query: 348 VALHSTPSAYNGGVVGHLLSSTSGFSTDLHSSSASTHERYLTKSPFISQSSQDCASYPLT 527
+ + + G VGH+ SS+ G+STDLH SS S HE++ + FISQS + AS PL
Sbjct: 60 -TFNHSSHISSSGAVGHMFSSSPGYSTDLHHSSLSPHEKHSRSAHFISQSLSNMASVPLP 118
Query: 528 HSSQSGIVQCTSSSNFGKENNNVSWSSVTPQSVHDFNGNIPDQNSQNESSD-HAIPTEDH 704
+SS +G V T+S+++ N+ SW + S DF+ N N+Q ES + + TE+
Sbjct: 119 YSSNNGPVPSTTSTHYSN-GNSASWHADPLPSFLDFSANASIDNNQVESGACNIMATEEF 177
Query: 705 XXXXXXXXXXXXLITDEDTSPPDWNELLVDTHIVDTLPKMAHQTPKRSSKISV-RQPQNH 881
LI+D+DT +WN+LL D +I D PK K SS+ Q Q+H
Sbjct: 178 SKRNDWQEWADQLISDDDTLTSNWNDLLAD-NIQDLEPKAVESISKSSSQFPAGHQSQDH 236
Query: 882 QQL-SVSEELCAVACPLSSISGSSIKPRMRWTPELHECFVQAVSQLGGSERATPKGVLKL 1058
QQL ++S E P SS + ++ KPRMRWTPELHE FV+AV+QLGGSERATPKGVLKL
Sbjct: 237 QQLPALSGENHVGVAPSSSANSATTKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKL 296
Query: 1059 MNVKGLTIYHVKSHLQKYRTARYRPXXXXXXXXXXXXAAEEMSSVHSKTGIEISEALRLQ 1238
M V+GLTIYHVKSHLQKYRTARYRP E++SS+ KTGIEI+EALRLQ
Sbjct: 297 MKVEGLTIYHVKSHLQKYRTARYRPESSEGAGEKKLSPIEDISSLDLKTGIEITEALRLQ 356
Query: 1239 MEVQKRLHEQLEIQRNLQLRIEEQGKVLQMIFEQQCKAADDKLKTSTLIREDPSSLNLEP 1418
MEVQKRLHEQLEIQRNLQLRIEEQG+ LQM+FE+QCK+ + K S+ E+PS ++ +
Sbjct: 357 MEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKSGVEPFKASSSAIENPSGVSSDT 416
Query: 1419 TQQLPSTKTEAEVVEKDH-----DTEHGTVDVKDKANENSSTCTEKQKTLASEVIEVFEP 1583
+ P TK E E + DH D +G+ V++ + E + AS+ +E
Sbjct: 417 MKDSP-TKNELEASKMDHCKSGPDQANGSTTVEESSLEAVEKLDTSKSQQASKDLE---- 471
Query: 1584 DVDEGSDAP-PKKRAKTDD 1637
+E D+P KR +TD+
Sbjct: 472 -QNENEDSPQAPKRQRTDE 489
>gb|AFK35281.1| unknown [Medicago truncatula]
Length = 489
Score = 380 bits (975), Expect = e-103
Identities = 228/499 (45%), Positives = 307/499 (61%), Gaps = 9/499 (1%)
Frame = +3
Query: 168 MEAHPSLTIQRSVTKQARSMGVSGFMSSSLPVLPTPLEEKYPKLSHSQKVCFDRELTADP 347
MEA P+ +I+RS ++Q ++G+SG + SSL V PTPLEE YP+ S SQ +++L
Sbjct: 1 MEARPAFSIERSSSQQLNNIGMSGALPSSLSVHPTPLEETYPRFSDSQPTYVEKDLKTK- 59
Query: 348 VALHSTPSAYNGGVVGHLLSSTSGFSTDLHSSSASTHERYLTKSPFISQSSQDCASYPLT 527
+ + + G VGH+ SS+ G+ TDLH SS S HE++ + FISQS + AS PL
Sbjct: 60 -TFNHSSHISSSGAVGHMFSSSPGYLTDLHHSSLSPHEKHSRSAHFISQSLSNMASVPLP 118
Query: 528 HSSQSGIVQCTSSSNFGKENNNVSWSSVTPQSVHDFNGNIPDQNSQNESSD-HAIPTEDH 704
+SS +G V T+S+++ N+ SW + S DF+ N N+Q ES + + TE+
Sbjct: 119 YSSNNGPVPSTTSTHYSN-GNSASWHADPLPSFLDFSANASIDNNQVESGACNIMATEEF 177
Query: 705 XXXXXXXXXXXXLITDEDTSPPDWNELLVDTHIVDTLPKMAHQTPKRSSKISV-RQPQNH 881
LI+D+DT +WN+LL D +I D PK K SS+ Q Q+H
Sbjct: 178 SKRNDWQEWADQLISDDDTLTSNWNDLLAD-NIQDLEPKAVESISKPSSQFPAGHQSQDH 236
Query: 882 QQL-SVSEELCAVACPLSSISGSSIKPRMRWTPELHECFVQAVSQLGGSERATPKGVLKL 1058
QQL ++S E P SS + ++ KPRMRWTPELHE FV+AV+QLGGSERATPKGVLKL
Sbjct: 237 QQLPALSGENHVGVAPSSSANSATTKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKL 296
Query: 1059 MNVKGLTIYHVKSHLQKYRTARYRPXXXXXXXXXXXXAAEEMSSVHSKTGIEISEALRLQ 1238
M V+GLTIYHVKSHLQKYRTARYRP E++SS+ KTGIEI+EALRLQ
Sbjct: 297 MKVEGLTIYHVKSHLQKYRTARYRPESSEGAGEKKLSPIEDISSLDLKTGIEITEALRLQ 356
Query: 1239 MEVQKRLHEQLEIQRNLQLRIEEQGKVLQMIFEQQCKAADDKLKTSTLIREDPSSLNLEP 1418
MEVQKRLHEQLEIQRNLQLRIEEQG+ LQM+FE+QCK+ + K S+ E+PS ++ +
Sbjct: 357 MEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKSGVEPFKASSSAIENPSGVSSDT 416
Query: 1419 TQQLPSTKTEAEVVEKDH-----DTEHGTVDVKDKANENSSTCTEKQKTLASEVIEVFEP 1583
+ P TK E E + DH D +G+ V++ + E + AS+ +E
Sbjct: 417 MKDSP-TKNELEASKMDHCKSRPDQANGSTTVEESSLEAVEKLDTSKSQQASKDLE---- 471
Query: 1584 DVDEGSDAP-PKKRAKTDD 1637
+E D+P KR +TD+
Sbjct: 472 -QNENEDSPQAPKRQRTDE 489