BLASTX nr result

ID: Coptis24_contig00009030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009030
         (944 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272636.1| PREDICTED: uncharacterized protein LOC100244...   120   5e-25
emb|CBI40348.3| unnamed protein product [Vitis vinifera]               87   7e-15
ref|NP_001236776.1| uncharacterized protein LOC100306306 [Glycin...    84   4e-14
ref|XP_002511846.1| conserved hypothetical protein [Ricinus comm...    74   5e-11
ref|XP_002320787.1| predicted protein [Populus trichocarpa] gi|2...    73   1e-10

>ref|XP_002272636.1| PREDICTED: uncharacterized protein LOC100244723 [Vitis vinifera]
          Length = 209

 Score =  120 bits (301), Expect = 5e-25
 Identities = 65/125 (52%), Positives = 83/125 (66%), Gaps = 4/125 (3%)
 Frame = +3

Query: 3   RKNMKLVMDICKQMTMETASIEMSKKPPEGQSLSSENMDGQEHVDRHHEEKQVKRHHPDR 182
           R+ +K++MD+ KQMT ET SI   K  PE Q   SEN DGQ+  +RH + KQ ++  PD 
Sbjct: 85  REQLKVLMDLYKQMTAETVSIGKCKNVPEAQPTLSENKDGQKPHERHQDVKQAEQSVPDC 144

Query: 183 S-ADRSPDLPF-SGNNSDKL--EDDQPQGSYVIGGSNFGWNFVLFPGSKAVYYGVTKESF 350
           + A  S D+PF + N S+K   ED   QG+YV+GGS FGWNF+ FPGSK  YYGVTKE+F
Sbjct: 145 AFAKPSEDMPFPTANLSEKQRPEDGWAQGTYVVGGSAFGWNFITFPGSKPAYYGVTKETF 204

Query: 351 RMKIK 365
           R   K
Sbjct: 205 RAAAK 209


>emb|CBI40348.3| unnamed protein product [Vitis vinifera]
          Length = 185

 Score = 86.7 bits (213), Expect = 7e-15
 Identities = 53/124 (42%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
 Frame = +3

Query: 3   RKNMKLVMDICKQMTMETASIEMSKKPPEGQSLSSENMDGQEHVDRHHEEKQVKRHHPDR 182
           R+ +K++MD+ KQMT ET SI   K  PE Q   +                         
Sbjct: 85  REQLKVLMDLYKQMTAETVSIGKCKNVPEAQPTLNCAF---------------------- 122

Query: 183 SADRSPDLPF-SGNNSDKL--EDDQPQGSYVIGGSNFGWNFVLFPGSKAVYYGVTKESFR 353
            A  S D+PF + N S+K   ED   QG+YV+GGS FGWNF+ FPGSK  YYGVTKE+FR
Sbjct: 123 -AKPSEDMPFPTANLSEKQRPEDGWAQGTYVVGGSAFGWNFITFPGSKPAYYGVTKETFR 181

Query: 354 MKIK 365
              K
Sbjct: 182 AAAK 185


>ref|NP_001236776.1| uncharacterized protein LOC100306306 [Glycine max]
           gi|255628159|gb|ACU14424.1| unknown [Glycine max]
          Length = 190

 Score = 84.3 bits (207), Expect = 4e-14
 Identities = 44/120 (36%), Positives = 70/120 (58%), Gaps = 3/120 (2%)
 Frame = +3

Query: 3   RKNMKLVMDICKQMTMETASIEMSKKPPEGQSLSSENMDGQ---EHVDRHHEEKQVKRHH 173
           ++ +K+V+ + + M  + AS+  SK   +GQ  + +NMD +   E   +H ++ QV++  
Sbjct: 66  QEQLKIVVKLYENMKADAASLAKSKNVQDGQMKAGQNMDQKTLKEQQPQHGKQSQVEKSF 125

Query: 174 PDRSADRSPDLPFSGNNSDKLEDDQPQGSYVIGGSNFGWNFVLFPGSKAVYYGVTKESFR 353
             R ++     P  G     +E+ Q QG+YV+GGS FGWNF+ F G + VYYG TKE FR
Sbjct: 126 A-RPSEIKLTPPAPGFQKQLVEETQTQGTYVVGGSAFGWNFITFSGKEPVYYGRTKEQFR 184


>ref|XP_002511846.1| conserved hypothetical protein [Ricinus communis]
           gi|223549026|gb|EEF50515.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 246

 Score = 73.9 bits (180), Expect = 5e-11
 Identities = 43/117 (36%), Positives = 63/117 (53%)
 Frame = +3

Query: 3   RKNMKLVMDICKQMTMETASIEMSKKPPEGQSLSSENMDGQEHVDRHHEEKQVKRHHPDR 182
           R+ +KL+M++ K++T E    +  K  P GQ LSSEN   ++   +  + K  ++   D 
Sbjct: 133 RQRLKLLMELYKELTAEAFITKKPKNEPGGQHLSSENGAAEKPQKQLQDVKPTEQLQSDH 192

Query: 183 SADRSPDLPFSGNNSDKLEDDQPQGSYVIGGSNFGWNFVLFPGSKAVYYGVTKESFR 353
              +          S+K      + S  IGGS FGWNF+ FPGSK V+YG TKE+FR
Sbjct: 193 VFAKP---------SEKEAIHLEEQSCYIGGSAFGWNFITFPGSKPVFYGRTKEAFR 240


>ref|XP_002320787.1| predicted protein [Populus trichocarpa] gi|222861560|gb|EEE99102.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
 Frame = +3

Query: 12  MKLVMDICKQMTMETASIEMSKKPPEGQSLSSENMDGQEHVDRHHEEKQVKRHHPDRSAD 191
           +KL+M++ KQMT E A+I   K  P     S   +  QE +    ++ Q           
Sbjct: 168 LKLLMELYKQMTAEKATITKWKITPNSNE-SGVGLKPQEQLQETADQSQ----------- 215

Query: 192 RSPDLPFSG-NNSDKLEDDQPQGSYVIGGSNFGWNFVLFPGSKAVYYGVTKESFR 353
             P   F+  +   + E  + QG++++GGS FGWNF+ FPGSK +YYG TKE FR
Sbjct: 216 --PGQVFAKPSEKQQAEHSENQGTHIVGGSAFGWNFITFPGSKPIYYGRTKELFR 268


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