BLASTX nr result

ID: Coptis24_contig00009029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009029
         (765 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283029.1| PREDICTED: uncharacterized protein LOC100247...   213   5e-53
emb|CAN71304.1| hypothetical protein VITISV_001728 [Vitis vinifera]   212   6e-53
ref|XP_002324755.1| predicted protein [Populus trichocarpa] gi|1...   211   1e-52
ref|XP_002516461.1| hydrogen-transporting ATP synthase, rotation...   209   4e-52
ref|XP_002277333.1| PREDICTED: uncharacterized protein LOC100267...   209   7e-52

>ref|XP_002283029.1| PREDICTED: uncharacterized protein LOC100247007 isoform 1 [Vitis
           vinifera] gi|359493934|ref|XP_003634695.1| PREDICTED:
           uncharacterized protein LOC100247007 isoform 2 [Vitis
           vinifera] gi|302143185|emb|CBI20480.3| unnamed protein
           product [Vitis vinifera]
          Length = 122

 Score =  213 bits (541), Expect = 5e-53
 Identities = 100/122 (81%), Positives = 109/122 (89%)
 Frame = -1

Query: 681 MASKLHQLQSKAVQASGFVAKRGSAYYKQLLEQNKQYIQEPPTVEKCNLLSKQLFYTRLA 502
           MASKL QLQSKA QAS FV K G AY+KQLLEQNKQY+QEPPTVEKCNLL+KQLFYTRLA
Sbjct: 1   MASKLQQLQSKAAQASQFVVKHGCAYHKQLLEQNKQYVQEPPTVEKCNLLAKQLFYTRLA 60

Query: 501 SIPGRAEAFRKEIDYVKHMWRNKQDLKVEDASNAALFGLECFCWFCVGEIAGRGFTFTGY 322
           SIPGR E+F KE+DYVKHMW+N+Q+LKVEDA  AALFGLEC+ WFC GEI GRGFTFTGY
Sbjct: 61  SIPGRYESFWKELDYVKHMWKNRQELKVEDAGIAALFGLECYAWFCAGEIVGRGFTFTGY 120

Query: 321 YV 316
           YV
Sbjct: 121 YV 122


>emb|CAN71304.1| hypothetical protein VITISV_001728 [Vitis vinifera]
          Length = 122

 Score =  212 bits (540), Expect = 6e-53
 Identities = 100/122 (81%), Positives = 109/122 (89%)
 Frame = -1

Query: 681 MASKLHQLQSKAVQASGFVAKRGSAYYKQLLEQNKQYIQEPPTVEKCNLLSKQLFYTRLA 502
           MASKL QLQSKA QAS FV K G AY+KQLLEQNKQY+QEPPTVEKCNLL+KQLFYTRLA
Sbjct: 1   MASKLQQLQSKAAQASQFVXKHGCAYHKQLLEQNKQYVQEPPTVEKCNLLAKQLFYTRLA 60

Query: 501 SIPGRAEAFRKEIDYVKHMWRNKQDLKVEDASNAALFGLECFCWFCVGEIAGRGFTFTGY 322
           SIPGR E+F KE+DYVKHMW+N+Q+LKVEDA  AALFGLEC+ WFC GEI GRGFTFTGY
Sbjct: 61  SIPGRYESFWKELDYVKHMWKNRQELKVEDAGIAALFGLECYAWFCAGEIVGRGFTFTGY 120

Query: 321 YV 316
           YV
Sbjct: 121 YV 122


>ref|XP_002324755.1| predicted protein [Populus trichocarpa] gi|118483071|gb|ABK93445.1|
           unknown [Populus trichocarpa]
           gi|222866189|gb|EEF03320.1| predicted protein [Populus
           trichocarpa]
          Length = 122

 Score =  211 bits (538), Expect = 1e-52
 Identities = 101/122 (82%), Positives = 111/122 (90%)
 Frame = -1

Query: 681 MASKLHQLQSKAVQASGFVAKRGSAYYKQLLEQNKQYIQEPPTVEKCNLLSKQLFYTRLA 502
           MASKL QLQSKA QAS FV+K GSAYYKQLLEQNKQYIQ+PP+VEKCNLLSKQLFYTRLA
Sbjct: 1   MASKLTQLQSKACQASKFVSKHGSAYYKQLLEQNKQYIQDPPSVEKCNLLSKQLFYTRLA 60

Query: 501 SIPGRAEAFRKEIDYVKHMWRNKQDLKVEDASNAALFGLECFCWFCVGEIAGRGFTFTGY 322
           SIP R+EAF KE+DYVKH+W+++Q+LKVEDA  AALFGLECF WFC GEI GRGFTFTGY
Sbjct: 61  SIPVRSEAFWKELDYVKHLWKHRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 321 YV 316
           YV
Sbjct: 121 YV 122


>ref|XP_002516461.1| hydrogen-transporting ATP synthase, rotational mechanism, putative
           [Ricinus communis] gi|223544281|gb|EEF45802.1|
           hydrogen-transporting ATP synthase, rotational
           mechanism, putative [Ricinus communis]
          Length = 122

 Score =  209 bits (533), Expect = 4e-52
 Identities = 100/122 (81%), Positives = 107/122 (87%)
 Frame = -1

Query: 681 MASKLHQLQSKAVQASGFVAKRGSAYYKQLLEQNKQYIQEPPTVEKCNLLSKQLFYTRLA 502
           MASKL QLQSKA QAS FVAK G AY+KQLLEQNKQYIQEPPTVEKCNLLSKQLFYTRL 
Sbjct: 1   MASKLAQLQSKATQASQFVAKHGCAYFKQLLEQNKQYIQEPPTVEKCNLLSKQLFYTRLE 60

Query: 501 SIPGRAEAFRKEIDYVKHMWRNKQDLKVEDASNAALFGLECFCWFCVGEIAGRGFTFTGY 322
           SIPGR EAF KE+DYVKH+W+N+ DLKVEDA  A +FGLECF WFC GEI GRGFTFTGY
Sbjct: 61  SIPGRYEAFWKELDYVKHLWKNRTDLKVEDAGIATMFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 321 YV 316
           +V
Sbjct: 121 HV 122


>ref|XP_002277333.1| PREDICTED: uncharacterized protein LOC100267911 [Vitis vinifera]
           gi|147818794|emb|CAN67282.1| hypothetical protein
           VITISV_021594 [Vitis vinifera]
           gi|296081617|emb|CBI20622.3| unnamed protein product
           [Vitis vinifera]
          Length = 122

 Score =  209 bits (531), Expect = 7e-52
 Identities = 101/122 (82%), Positives = 108/122 (88%)
 Frame = -1

Query: 681 MASKLHQLQSKAVQASGFVAKRGSAYYKQLLEQNKQYIQEPPTVEKCNLLSKQLFYTRLA 502
           MASKL QLQSKA QAS FVAK G AYYKQL+EQNKQYIQEPPTVEKCNLLSKQLFYTRLA
Sbjct: 1   MASKLVQLQSKASQASQFVAKHGCAYYKQLMEQNKQYIQEPPTVEKCNLLSKQLFYTRLA 60

Query: 501 SIPGRAEAFRKEIDYVKHMWRNKQDLKVEDASNAALFGLECFCWFCVGEIAGRGFTFTGY 322
           SIPGR EAF KE+D VK +W+N+Q++KVEDA  AALFGLECF WFC GEI GRGFTFTGY
Sbjct: 61  SIPGRYEAFWKELDCVKQLWKNRQEMKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 321 YV 316
           YV
Sbjct: 121 YV 122


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