BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009017
         (1075 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera]   362   7e-98
ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|2...   344   2e-92
ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containi...   336   5e-90
ref|XP_002514778.1| pentatricopeptide repeat-containing protein,...   333   6e-89
gb|ACI14438.1| Os01g67210-like protein [Triticum urartu]              319   9e-85

>emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera]
          Length = 549

 Score =  362 bits (930), Expect = 7e-98
 Identities = 182/288 (63%), Positives = 223/288 (77%)
 Frame = -1

Query: 1075 VCEKMLTAGKLPDDIKEIGNLIACFCKGNMTKEAHLVYLKAKEKKKRLPHFSIKLLVSSL 896
            VCEKML A  LPD  K + N+I+ FCKG   K+A+LVYL AKEK K  P  ++  L++SL
Sbjct: 263  VCEKMLNASSLPDSEK-VWNIISWFCKGRKVKDAYLVYLLAKEKNKYPPKTTVNFLIASL 321

Query: 895  CKENDTVKLALDLLDDFNESGRKYAIKHYSGVIRGLLRIKDIEAAKTLLFKMIDEGPPPG 716
            C+E+ T+ +A+++LDDF+    KYAIK Y+ VIRGL R KD++ AK LL KMI+ GPPPG
Sbjct: 322  CREDGTISMAVEMLDDFSGEECKYAIKPYTAVIRGLCRSKDVDGAKRLLLKMIEAGPPPG 381

Query: 715  NAVFNSVINVLCKAGRMEEARDLVKVMENRGLRPDVYTYCVIMSGYAKKGLMEEAQNVFS 536
            NAVFN VIN L KAG MEEA  ++K+ME RGL+PDVYTY VIMSGYA  G+MEEA  V S
Sbjct: 382  NAVFNFVINGLSKAGEMEEAMKMMKLMETRGLKPDVYTYSVIMSGYAHGGMMEEACRVLS 441

Query: 535  EAKNTHSILSPVTYHVLTRGYCKIEEFDKALKLFNEMKESGLKPNADEYNKMIQSLCLEA 356
            EAK  HS LSPVTYH L RGYCK+E+FDKA++L  EMKE G++PN DEYNK+IQSLCL+A
Sbjct: 442  EAKRNHSKLSPVTYHTLIRGYCKLEQFDKAVELLGEMKEHGVQPNTDEYNKLIQSLCLKA 501

Query: 355  FDWRTAEKLLEEMKENDLHVDGITRDLITAVKELEEHKVNAEKEFEIE 212
             DW+TAEKLLEEMK+N LH++GITR LI AVKELEE +  A +E  +E
Sbjct: 502  LDWQTAEKLLEEMKQNGLHLNGITRGLIRAVKELEE-EGRATEELRVE 548


>ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|222847615|gb|EEE85162.1|
            predicted protein [Populus trichocarpa]
          Length = 476

 Score =  344 bits (883), Expect = 2e-92
 Identities = 173/287 (60%), Positives = 218/287 (75%)
 Frame = -1

Query: 1075 VCEKMLTAGKLPDDIKEIGNLIACFCKGNMTKEAHLVYLKAKEKKKRLPHFSIKLLVSSL 896
            VCEKML  G LPD  K IG +I  FCKG+  K+AH VYL AKEK K  P  ++  L+ SL
Sbjct: 191  VCEKMLDQGPLPDSEK-IGKIICWFCKGSKAKDAHKVYLLAKEKSKCPPKPALYFLIGSL 249

Query: 895  CKENDTVKLALDLLDDFNESGRKYAIKHYSGVIRGLLRIKDIEAAKTLLFKMIDEGPPPG 716
            C+++ TV LAL++L+DF    +KYAIK +S VIRGL RIKD++ AK LL KMI EGPPPG
Sbjct: 250  CRDDGTVNLALEMLNDFEGEAKKYAIKPFSSVIRGLCRIKDLDGAKQLLSKMIVEGPPPG 309

Query: 715  NAVFNSVINVLCKAGRMEEARDLVKVMENRGLRPDVYTYCVIMSGYAKKGLMEEAQNVFS 536
            NAVFN+VI+  CK G M+EA +++K+ME+RGL+PDVYTY VI+SGY+  G MEEA  + S
Sbjct: 310  NAVFNTVISGYCKGGDMKEAIEIMKLMESRGLKPDVYTYTVIISGYSNGGQMEEACYILS 369

Query: 535  EAKNTHSILSPVTYHVLTRGYCKIEEFDKALKLFNEMKESGLKPNADEYNKMIQSLCLEA 356
            EAK  HS LSPVTYH L RGYCK+++FDKAL+L  EM++ G++PNADEYNK+IQSLCL++
Sbjct: 370  EAKKKHSKLSPVTYHALIRGYCKLDQFDKALELLAEMEKFGVQPNADEYNKLIQSLCLKS 429

Query: 355  FDWRTAEKLLEEMKENDLHVDGITRDLITAVKELEEHKVNAEKEFEI 215
             DW TAEKL  EMKE  L+++ ITR LITAVKELE+  +  E   E+
Sbjct: 430  LDWGTAEKLFAEMKEKGLYLNSITRSLITAVKELEQEGLAKEVSIEV 476


>ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
            mitochondrial-like [Cucumis sativus]
            gi|449477884|ref|XP_004155152.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g02650,
            mitochondrial-like [Cucumis sativus]
          Length = 479

 Score =  336 bits (862), Expect = 5e-90
 Identities = 165/283 (58%), Positives = 213/283 (75%)
 Frame = -1

Query: 1075 VCEKMLTAGKLPDDIKEIGNLIACFCKGNMTKEAHLVYLKAKEKKKRLPHFSIKLLVSSL 896
            VCEKML +G +P+    +G +I+ FCKGN  K AH VYL AKEK   LP   + +L+ SL
Sbjct: 193  VCEKMLDSGSMPES-NRVGKIISLFCKGNKAKNAHSVYLLAKEKHVNLPQCYMNILIHSL 251

Query: 895  CKENDTVKLALDLLDDFNESGRKYAIKHYSGVIRGLLRIKDIEAAKTLLFKMIDEGPPPG 716
            C++++TVKLAL++L+DF+   R+ AIK Y  VIR L RIKD   AKTLL KMI EGPPPG
Sbjct: 252  CRDDETVKLALEMLNDFSTGERRRAIKPYMEVIRSLCRIKDTSKAKTLLQKMIAEGPPPG 311

Query: 715  NAVFNSVINVLCKAGRMEEARDLVKVMENRGLRPDVYTYCVIMSGYAKKGLMEEAQNVFS 536
            NA FN+VI    KAG +EEA +L+K+ME+RGL+PDVY+Y  ++SGYAK G M+EA  V  
Sbjct: 312  NAAFNAVICGYSKAGDLEEAMELIKLMESRGLKPDVYSYTAVISGYAKGGQMKEAYEVLD 371

Query: 535  EAKNTHSILSPVTYHVLTRGYCKIEEFDKALKLFNEMKESGLKPNADEYNKMIQSLCLEA 356
            EAK  H+ LS +TYH L R +CK+EE+D ALKL +EMK  G++PN DEYNK+I+SLCL+A
Sbjct: 372  EAKKKHAKLSHITYHTLIRNHCKLEEYDSALKLLSEMKNFGVQPNVDEYNKLIRSLCLKA 431

Query: 355  FDWRTAEKLLEEMKENDLHVDGITRDLITAVKELEEHKVNAEK 227
             DWRT+E+L EEMKEN LH++GITR LI AV+ELEE ++  E+
Sbjct: 432  VDWRTSERLFEEMKENGLHLNGITRGLIRAVRELEEEELTTEE 474


>ref|XP_002514778.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545829|gb|EEF47332.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 584

 Score =  333 bits (853), Expect = 6e-89
 Identities = 172/282 (60%), Positives = 209/282 (74%)
 Frame = -1

Query: 1075 VCEKMLTAGKLPDDIKEIGNLIACFCKGNMTKEAHLVYLKAKEKKKRLPHFSIKLLVSSL 896
            V EKML A  LPD  K IG +I  FCKG+   +A+LVYL AKEK K  P  S+  L+  L
Sbjct: 299  VREKMLRAEALPDTEK-IGKIICWFCKGDKANDAYLVYLLAKEKNKYPPQPSVNFLIGLL 357

Query: 895  CKENDTVKLALDLLDDFNESGRKYAIKHYSGVIRGLLRIKDIEAAKTLLFKMIDEGPPPG 716
            C++N+TVKLAL++LD F+   RKYAIK +S VIR L RIKD++ AK LL KM+DEGPPPG
Sbjct: 358  CQKNETVKLALEMLDAFSGPKRKYAIKPFSSVIRALCRIKDLDGAKMLLSKMVDEGPPPG 417

Query: 715  NAVFNSVINVLCKAGRMEEARDLVKVMENRGLRPDVYTYCVIMSGYAKKGLMEEAQNVFS 536
            NAVFNS+IN   K G M+EA  + ++M  RGL+PD++TY VIMSGYA  G MEEA  V S
Sbjct: 418  NAVFNSIINGYSKCGDMKEAIKMKQLMVRRGLKPDLFTYAVIMSGYASGGQMEEACKVLS 477

Query: 535  EAKNTHSILSPVTYHVLTRGYCKIEEFDKALKLFNEMKESGLKPNADEYNKMIQSLCLEA 356
            EAK  HS LSPV YH + RGYCK+E+FDKAL L  EMK  G++ NADEYNK+IQSLCL+A
Sbjct: 478  EAKKKHSKLSPVMYHTVIRGYCKLEQFDKALDLLAEMKTFGVQANADEYNKLIQSLCLKA 537

Query: 355  FDWRTAEKLLEEMKENDLHVDGITRDLITAVKELEEHKVNAE 230
             DW  AEKLLE+MKE+ LH++GITR LI AVKELE+  +  E
Sbjct: 538  LDWERAEKLLEKMKEDGLHLNGITRGLIRAVKELEDEGIEKE 579


>gb|ACI14438.1| Os01g67210-like protein [Triticum urartu]
          Length = 358

 Score =  319 bits (817), Expect = 9e-85
 Identities = 156/284 (54%), Positives = 213/284 (75%)
 Frame = -1

Query: 1075 VCEKMLTAGKLPDDIKEIGNLIACFCKGNMTKEAHLVYLKAKEKKKRLPHFSIKLLVSSL 896
            VCEKM+++G  PD  K  G ++  FCKG   KEAH VYL AKEKK ++P  S+  LV +L
Sbjct: 74   VCEKMISSGCFPDGEKA-GEIVTFFCKGKKVKEAHSVYLAAKEKKVQIPTSSLDFLVGAL 132

Query: 895  CKENDTVKLALDLLDDFNESGRKYAIKHYSGVIRGLLRIKDIEAAKTLLFKMIDEGPPPG 716
             K ++TV +AL+LL+++     K+A K ++ VI  L R+K+++ AK LL +M++ GP PG
Sbjct: 133  AKNDETVSMALELLEEYKGESLKHAGKSFAAVIHSLCRMKNVKDAKKLLMRMVNLGPAPG 192

Query: 715  NAVFNSVINVLCKAGRMEEARDLVKVMENRGLRPDVYTYCVIMSGYAKKGLMEEAQNVFS 536
            +AVFN VI  L K G ME+A+D+++VME+RGLRPDVYTY VIMSGYAK G+++EA ++  
Sbjct: 193  SAVFNFVITGLSKEGEMEDAKDMIRVMESRGLRPDVYTYSVIMSGYAKGGMIDEAHSLLR 252

Query: 535  EAKNTHSILSPVTYHVLTRGYCKIEEFDKALKLFNEMKESGLKPNADEYNKMIQSLCLEA 356
            EAK  +  L+ VTYH+L RGYCK+EEF+KAL+   EMK+ G++PN DEYNK+IQSLCL+A
Sbjct: 253  EAKKIYRKLNRVTYHILIRGYCKMEEFEKALECLKEMKKDGVQPNVDEYNKLIQSLCLKA 312

Query: 355  FDWRTAEKLLEEMKENDLHVDGITRDLITAVKELEEHKVNAEKE 224
             DWRTAEKLLEEM+ + L++ GITR LI AVKELE  +V+ + +
Sbjct: 313  MDWRTAEKLLEEMEGSGLYLKGITRSLIAAVKELEMEEVSKDSQ 356