BLASTX nr result
ID: Coptis24_contig00009013
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00009013
(1342 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278150.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera... 410 e-167
gb|AAG29095.1|AF224745_1 Glu-tRNA(Gln) amidotransferase subunit ... 400 e-166
ref|NP_189194.1| Amidase family protein [Arabidopsis thaliana] g... 400 e-166
ref|XP_002876924.1| hypothetical protein ARALYDRAFT_484328 [Arab... 398 e-165
ref|XP_003599919.1| Glutamyl-tRNA(Gln) amidotransferase subunit ... 399 e-165
>ref|XP_002278150.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A,
chloroplastic/mitochondrial [Vitis vinifera]
gi|353558711|sp|E0CTY1.1|GATA_VITVI RecName:
Full=Glutamyl-tRNA(Gln) amidotransferase subunit A,
chloroplastic/mitochondrial; Short=Glu-AdT subunit A;
Flags: Precursor gi|302143486|emb|CBI22047.3| unnamed
protein product [Vitis vinifera]
Length = 546
Score = 410 bits (1053), Expect(2) = e-167
Identities = 209/305 (68%), Positives = 241/305 (79%)
Frame = +1
Query: 40 NSSPSSQILKTRHSLLNHERKAVDIAEEYLSRLKITEPTIRSFLHVSENVVKEAEGIDRK 219
+S P SQIL R +L+N AV++A+ L+RL++TEP I SF+ VSE V++EAE ID K
Sbjct: 46 SSPPQSQILTIRDNLINRRTTAVELAQLSLNRLRLTEPQINSFISVSETVLREAEEIDAK 105
Query: 220 VERKEELGCLAGVLVGVKDNICTFDMPSTGGSKILDGYRPAFDATAVKKVRECGGIVFGK 399
+ R EELG LAGV VGVKDNICT DMPSTGGS+IL+ YRP FDATAVK+V++CGGIV GK
Sbjct: 106 IARNEELGPLAGVFVGVKDNICTADMPSTGGSRILENYRPPFDATAVKRVKDCGGIVVGK 165
Query: 400 TNLDEFGMGSSTERSGFQVTSNPWDATRVPXXXXXXXXXXXXXXQCMVSLGSDTGGSVRQ 579
TNLDEFGMGS+TE S FQVT+NPWD +RVP QC+VSLGSDTGGSVRQ
Sbjct: 166 TNLDEFGMGSTTEGSAFQVTANPWDVSRVPGGSSGGSAAAVSARQCVVSLGSDTGGSVRQ 225
Query: 580 PASFCGVVGIKPTYGRVSRFGLMAYASSLDVIGCFSSSVVDTAILLEAISGHDRFDATSS 759
PASFCGVVG+KPTYGRVSRFGLMAYASSLDVIGCF SSV DT ILL AI+G+D D+TSS
Sbjct: 226 PASFCGVVGLKPTYGRVSRFGLMAYASSLDVIGCFGSSVADTGILLHAIAGYDGLDSTSS 285
Query: 760 KRKVPNLASQLVPTESLESKPLKGLRVGVICETLADGVDVGVVSAIQAAAAHLEELGSTV 939
K +VPN SQ + SLESKPLKGLRVG+I ETL DGVD VVS+I AA+HLEELG TV
Sbjct: 286 KHEVPNYTSQFMSISSLESKPLKGLRVGLIRETLDDGVDKAVVSSIVGAASHLEELGCTV 345
Query: 940 TETGV 954
TE +
Sbjct: 346 TEVSL 350
Score = 205 bits (521), Expect(2) = e-167
Identities = 103/132 (78%), Positives = 112/132 (84%)
Frame = +2
Query: 947 QVSLPSFSLGLPAYYILAXXXXXXXXXRYDAVRYGNQVSAEELSSLYGASRANGFGSEVK 1126
+VSLPSFSLGLPAYYILA RYD VRYG+QV A+ L+SLYG SRA GFG EVK
Sbjct: 347 EVSLPSFSLGLPAYYILASSESSSNLSRYDGVRYGSQVGADRLNSLYGDSRAKGFGPEVK 406
Query: 1127 MRILMGTYALSAGYYDAYYKRAQQVRTLVRESFRTALQENDVLISPAAPSAAYKIGEKKD 1306
MRIL GTYALSAGYYDAYYKRAQQVRTLV++SF+ AL END+LISPAAPS AY IGEKK+
Sbjct: 407 MRILTGTYALSAGYYDAYYKRAQQVRTLVQKSFKAALNENDILISPAAPSPAYSIGEKKN 466
Query: 1307 DPLAMYAGDIMT 1342
DPLAMYAGDIMT
Sbjct: 467 DPLAMYAGDIMT 478
>gb|AAG29095.1|AF224745_1 Glu-tRNA(Gln) amidotransferase subunit A [Arabidopsis thaliana]
Length = 537
Score = 400 bits (1029), Expect(2) = e-166
Identities = 201/304 (66%), Positives = 239/304 (78%)
Frame = +1
Query: 43 SSPSSQILKTRHSLLNHERKAVDIAEEYLSRLKITEPTIRSFLHVSENVVKEAEGIDRKV 222
S P SQIL TR SLL+ E AV+IA+ YLSR+++TEP ++ FLHVSENV+K+A+ ID+++
Sbjct: 40 SPPQSQILTTRRSLLSGETTAVEIAKSYLSRIRLTEPQLKCFLHVSENVLKDAQEIDQRI 99
Query: 223 ERKEELGCLAGVLVGVKDNICTFDMPSTGGSKILDGYRPAFDATAVKKVRECGGIVFGKT 402
+ EELG LAGVL+GVKDNICT MPST S+IL+ YRP FDATAVKK++E GGIV GKT
Sbjct: 100 AKGEELGPLAGVLIGVKDNICTQGMPSTAASRILEHYRPPFDATAVKKIKELGGIVVGKT 159
Query: 403 NLDEFGMGSSTERSGFQVTSNPWDATRVPXXXXXXXXXXXXXXQCMVSLGSDTGGSVRQP 582
N+DEFGMGS+TE S FQVT+NPWD +RVP QCMVSLGSDTGGSVRQP
Sbjct: 160 NMDEFGMGSTTEASAFQVTANPWDLSRVPGGSSGGSAAAVAARQCMVSLGSDTGGSVRQP 219
Query: 583 ASFCGVVGIKPTYGRVSRFGLMAYASSLDVIGCFSSSVVDTAILLEAISGHDRFDATSSK 762
ASFCGVVG+KPTYGRVSRFGLMAYASSLDVIGCF S+V D +LL AISG+DRFD+TSSK
Sbjct: 220 ASFCGVVGLKPTYGRVSRFGLMAYASSLDVIGCFGSTVADAGMLLHAISGYDRFDSTSSK 279
Query: 763 RKVPNLASQLVPTESLESKPLKGLRVGVICETLADGVDVGVVSAIQAAAAHLEELGSTVT 942
+ VP SQ + + ESKPL G++VG+I ETL DGVD GV SA Q AA+HLE LG +T
Sbjct: 280 QDVPEFRSQFLSVDHFESKPLNGVKVGIIRETLEDGVDSGVRSATQEAASHLEALGCILT 339
Query: 943 ETGV 954
E +
Sbjct: 340 EVSL 343
Score = 212 bits (539), Expect(2) = e-166
Identities = 104/134 (77%), Positives = 114/134 (85%)
Frame = +2
Query: 941 LRQVSLPSFSLGLPAYYILAXXXXXXXXXRYDAVRYGNQVSAEELSSLYGASRANGFGSE 1120
L +VSLPSFSLGLPAYY++A RYD VRYGNQV AEEL+ LY SR GFG E
Sbjct: 338 LTEVSLPSFSLGLPAYYVIASSESSSNLSRYDGVRYGNQVMAEELNKLYECSRGEGFGGE 397
Query: 1121 VKMRILMGTYALSAGYYDAYYKRAQQVRTLVRESFRTALQENDVLISPAAPSAAYKIGEK 1300
VKMRILMGTYALSAGYYDAYYKRAQQVRTL+R+ F+ AL++ND+LISPAAPSAAYKIGEK
Sbjct: 398 VKMRILMGTYALSAGYYDAYYKRAQQVRTLIRKDFKAALEQNDILISPAAPSAAYKIGEK 457
Query: 1301 KDDPLAMYAGDIMT 1342
KDDPLAMYAGDIMT
Sbjct: 458 KDDPLAMYAGDIMT 471
>ref|NP_189194.1| Amidase family protein [Arabidopsis thaliana]
gi|75273321|sp|Q9LI77.1|GATA_ARATH RecName:
Full=Glutamyl-tRNA(Gln) amidotransferase subunit A,
chloroplastic/mitochondrial; Short=Glu-AdT subunit A;
Flags: Precursor gi|11994757|dbj|BAB03086.1| glutamyl
tRNA amidotransferase, subunit A [Arabidopsis thaliana]
gi|15010726|gb|AAK74022.1| AT3g25660/T5M7_8 [Arabidopsis
thaliana] gi|23308481|gb|AAN18210.1| At3g25660/T5M7_8
[Arabidopsis thaliana] gi|110741094|dbj|BAE98641.1|
putative glutamyl-tRNA amidotransferase subunit A
[Arabidopsis thaliana] gi|332643527|gb|AEE77048.1|
Amidase family protein [Arabidopsis thaliana]
Length = 537
Score = 400 bits (1029), Expect(2) = e-166
Identities = 201/304 (66%), Positives = 239/304 (78%)
Frame = +1
Query: 43 SSPSSQILKTRHSLLNHERKAVDIAEEYLSRLKITEPTIRSFLHVSENVVKEAEGIDRKV 222
S P SQIL TR SLL+ E AV+IA+ YLSR+++TEP ++ FLHVSENV+K+A+ ID+++
Sbjct: 40 SPPQSQILTTRRSLLSGETTAVEIAKSYLSRIRLTEPQLKCFLHVSENVLKDAQEIDQRI 99
Query: 223 ERKEELGCLAGVLVGVKDNICTFDMPSTGGSKILDGYRPAFDATAVKKVRECGGIVFGKT 402
+ EELG LAGVL+GVKDNICT MPST S+IL+ YRP FDATAVKK++E GGIV GKT
Sbjct: 100 AKGEELGPLAGVLIGVKDNICTQGMPSTAASRILEHYRPPFDATAVKKIKELGGIVVGKT 159
Query: 403 NLDEFGMGSSTERSGFQVTSNPWDATRVPXXXXXXXXXXXXXXQCMVSLGSDTGGSVRQP 582
N+DEFGMGS+TE S FQVT+NPWD +RVP QCMVSLGSDTGGSVRQP
Sbjct: 160 NMDEFGMGSTTEASAFQVTANPWDLSRVPGGSSGGSAAAVAARQCMVSLGSDTGGSVRQP 219
Query: 583 ASFCGVVGIKPTYGRVSRFGLMAYASSLDVIGCFSSSVVDTAILLEAISGHDRFDATSSK 762
ASFCGVVG+KPTYGRVSRFGLMAYASSLDVIGCF S+V D +LL AISG+DRFD+TSSK
Sbjct: 220 ASFCGVVGLKPTYGRVSRFGLMAYASSLDVIGCFGSTVADAGMLLHAISGYDRFDSTSSK 279
Query: 763 RKVPNLASQLVPTESLESKPLKGLRVGVICETLADGVDVGVVSAIQAAAAHLEELGSTVT 942
+ VP SQ + + ESKPL G++VG+I ETL DGVD GV SA Q AA+HLE LG +T
Sbjct: 280 QDVPEFQSQFLSVDHFESKPLNGVKVGIIRETLEDGVDSGVRSATQEAASHLEALGCILT 339
Query: 943 ETGV 954
E +
Sbjct: 340 EVSL 343
Score = 212 bits (539), Expect(2) = e-166
Identities = 104/134 (77%), Positives = 114/134 (85%)
Frame = +2
Query: 941 LRQVSLPSFSLGLPAYYILAXXXXXXXXXRYDAVRYGNQVSAEELSSLYGASRANGFGSE 1120
L +VSLPSFSLGLPAYY++A RYD VRYGNQV AEEL+ LY SR GFG E
Sbjct: 338 LTEVSLPSFSLGLPAYYVIASSESSSNLSRYDGVRYGNQVMAEELNKLYECSRGEGFGGE 397
Query: 1121 VKMRILMGTYALSAGYYDAYYKRAQQVRTLVRESFRTALQENDVLISPAAPSAAYKIGEK 1300
VKMRILMGTYALSAGYYDAYYKRAQQVRTL+R+ F+ AL++ND+LISPAAPSAAYKIGEK
Sbjct: 398 VKMRILMGTYALSAGYYDAYYKRAQQVRTLIRKDFKAALEQNDILISPAAPSAAYKIGEK 457
Query: 1301 KDDPLAMYAGDIMT 1342
KDDPLAMYAGDIMT
Sbjct: 458 KDDPLAMYAGDIMT 471
>ref|XP_002876924.1| hypothetical protein ARALYDRAFT_484328 [Arabidopsis lyrata subsp.
lyrata] gi|297322762|gb|EFH53183.1| hypothetical protein
ARALYDRAFT_484328 [Arabidopsis lyrata subsp. lyrata]
Length = 534
Score = 398 bits (1023), Expect(2) = e-165
Identities = 200/304 (65%), Positives = 238/304 (78%)
Frame = +1
Query: 43 SSPSSQILKTRHSLLNHERKAVDIAEEYLSRLKITEPTIRSFLHVSENVVKEAEGIDRKV 222
S P SQIL TR SLL+ E AV+IA+ YLSR+++TEP ++ FLHVSENV+K+A+ ID+++
Sbjct: 37 SPPQSQILTTRRSLLSGETTAVEIAKSYLSRIRLTEPQLKCFLHVSENVLKDAQEIDQRI 96
Query: 223 ERKEELGCLAGVLVGVKDNICTFDMPSTGGSKILDGYRPAFDATAVKKVRECGGIVFGKT 402
+ EELG LAGVL+GVKDNICT MPST S+IL+ YRP FDATAV+K++E GGIV GKT
Sbjct: 97 AKGEELGPLAGVLIGVKDNICTQGMPSTAASRILEHYRPPFDATAVRKIKELGGIVVGKT 156
Query: 403 NLDEFGMGSSTERSGFQVTSNPWDATRVPXXXXXXXXXXXXXXQCMVSLGSDTGGSVRQP 582
N+DEFGMGS+TE S FQVT NPWD +RVP QCMVSLGSDTGGSVRQP
Sbjct: 157 NMDEFGMGSTTEASAFQVTVNPWDLSRVPGGSSGGSAAAVAARQCMVSLGSDTGGSVRQP 216
Query: 583 ASFCGVVGIKPTYGRVSRFGLMAYASSLDVIGCFSSSVVDTAILLEAISGHDRFDATSSK 762
ASFCGVVG+KPTYGRVSRFGLMAYASSLDVIGCF S+V D +LL AISG+DRFD+TSSK
Sbjct: 217 ASFCGVVGLKPTYGRVSRFGLMAYASSLDVIGCFGSTVADAGMLLHAISGYDRFDSTSSK 276
Query: 763 RKVPNLASQLVPTESLESKPLKGLRVGVICETLADGVDVGVVSAIQAAAAHLEELGSTVT 942
+ VP SQ + + ESKPL G++VG+I ETL DGVD GV SA Q AA+HLE LG +T
Sbjct: 277 QDVPEFQSQFLSMDHFESKPLNGVKVGIIRETLEDGVDSGVRSATQEAASHLEALGCVLT 336
Query: 943 ETGV 954
E +
Sbjct: 337 EVSL 340
Score = 212 bits (539), Expect(2) = e-165
Identities = 104/134 (77%), Positives = 114/134 (85%)
Frame = +2
Query: 941 LRQVSLPSFSLGLPAYYILAXXXXXXXXXRYDAVRYGNQVSAEELSSLYGASRANGFGSE 1120
L +VSLPSFSLGLPAYY++A RYD VRYGNQV AEEL+ LY SR GFG E
Sbjct: 335 LTEVSLPSFSLGLPAYYVIASSESSSNLSRYDGVRYGNQVMAEELNKLYECSRGEGFGGE 394
Query: 1121 VKMRILMGTYALSAGYYDAYYKRAQQVRTLVRESFRTALQENDVLISPAAPSAAYKIGEK 1300
VKMRILMGTYALSAGYYDAYYKRAQQVRTL+R+ F+ AL++ND+LISPAAPSAAYKIGEK
Sbjct: 395 VKMRILMGTYALSAGYYDAYYKRAQQVRTLIRKDFKAALEQNDILISPAAPSAAYKIGEK 454
Query: 1301 KDDPLAMYAGDIMT 1342
KDDPLAMYAGDIMT
Sbjct: 455 KDDPLAMYAGDIMT 468
>ref|XP_003599919.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Medicago truncatula]
gi|355488967|gb|AES70170.1| Glutamyl-tRNA(Gln)
amidotransferase subunit A [Medicago truncatula]
Length = 537
Score = 399 bits (1024), Expect(2) = e-165
Identities = 199/306 (65%), Positives = 240/306 (78%), Gaps = 2/306 (0%)
Frame = +1
Query: 43 SSPSSQILKTRHSLLNHERKAVDIAEEYLSRLKITEPTIRSFLHV--SENVVKEAEGIDR 216
++P SQIL RHSLL + A D+ + +L+R+++TEP +RSFLH+ ++++ +A +DR
Sbjct: 37 TAPPSQILTLRHSLLTNTLSATDLIQSHLTRIRLTEPHLRSFLHLPSDQSLLDQAHDLDR 96
Query: 217 KVERKEELGCLAGVLVGVKDNICTFDMPSTGGSKILDGYRPAFDATAVKKVRECGGIVFG 396
++ EE+G LAGVLV VKDNICT DMPSTGGS+ILDGYRP FDATAVK+V+E GGIV G
Sbjct: 97 RIAAGEEVGPLAGVLVAVKDNICTADMPSTGGSRILDGYRPPFDATAVKRVKELGGIVVG 156
Query: 397 KTNLDEFGMGSSTERSGFQVTSNPWDATRVPXXXXXXXXXXXXXXQCMVSLGSDTGGSVR 576
KTN+DEFGMGS+TE S FQVT+NPWD +RVP QC+VSLGSDTGGSVR
Sbjct: 157 KTNMDEFGMGSTTEASAFQVTANPWDVSRVPGGSSGGSAAAVSARQCVVSLGSDTGGSVR 216
Query: 577 QPASFCGVVGIKPTYGRVSRFGLMAYASSLDVIGCFSSSVVDTAILLEAISGHDRFDATS 756
QPASFCGVVG+KPTYGRVSRFGLMAYASSLD IGCF SSV D ILL AI+GHDRFDATS
Sbjct: 217 QPASFCGVVGLKPTYGRVSRFGLMAYASSLDAIGCFGSSVADAGILLHAIAGHDRFDATS 276
Query: 757 SKRKVPNLASQLVPTESLESKPLKGLRVGVICETLADGVDVGVVSAIQAAAAHLEELGST 936
SK++VPN S SLESKPLKGLR+G+I ET+ DGVD GVVSAI+ AA+H E LG +
Sbjct: 277 SKQEVPNFLSHFDSASSLESKPLKGLRIGLIRETIEDGVDAGVVSAIRDAASHFEALGCS 336
Query: 937 VTETGV 954
V+E +
Sbjct: 337 VSEVSL 342
Score = 210 bits (534), Expect(2) = e-165
Identities = 104/132 (78%), Positives = 114/132 (86%)
Frame = +2
Query: 947 QVSLPSFSLGLPAYYILAXXXXXXXXXRYDAVRYGNQVSAEELSSLYGASRANGFGSEVK 1126
+VSLPSFSLGLPAYY+LA RYD +RYGNQV AEEL+SLYG SRA G GSEVK
Sbjct: 339 EVSLPSFSLGLPAYYVLALSESSSNLSRYDGIRYGNQVYAEELNSLYGESRAKGLGSEVK 398
Query: 1127 MRILMGTYALSAGYYDAYYKRAQQVRTLVRESFRTALQENDVLISPAAPSAAYKIGEKKD 1306
MRILMGTYALSAGYYDAYYKRAQQVRT++R SF+ AL + D+LISPAAPSAAYKIGEKK+
Sbjct: 399 MRILMGTYALSAGYYDAYYKRAQQVRTIIRNSFKEALDQYDILISPAAPSAAYKIGEKKN 458
Query: 1307 DPLAMYAGDIMT 1342
DPLAMYAGDIMT
Sbjct: 459 DPLAMYAGDIMT 470