BLASTX nr result

ID: Coptis24_contig00009012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009012
         (773 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]   189   7e-46
ref|XP_002515544.1| conserved hypothetical protein [Ricinus comm...   171   2e-40
ref|XP_002324850.1| predicted protein [Populus trichocarpa] gi|2...   171   2e-40
ref|XP_002515541.1| conserved hypothetical protein [Ricinus comm...   165   9e-39
ref|XP_002513460.1| conserved hypothetical protein [Ricinus comm...   164   3e-38

>emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]
          Length = 439

 Score =  189 bits (479), Expect = 7e-46
 Identities = 100/223 (44%), Positives = 139/223 (62%), Gaps = 3/223 (1%)
 Frame = +3

Query: 39  MGQPDHFIRSSCDDIKHLLDILRVYFVPSTTRIPTTETAKVRRIPSATTLHESGVKFNMG 218
           +G  +  IR S  D+KHLLD+LR++FVP ++   +T  +K   I S T LHE+GVKF MG
Sbjct: 214 LGLQEVLIRDSQPDVKHLLDLLRLWFVPPSST-KSTSKSKFELIRSVTELHEAGVKFRMG 272

Query: 219 TTNCFLDITFTNGVINIPTMRVADRTEWVFRNLIAMEQS-QEDTTTFIGDYFYILDSLVN 395
           T +C ++I F NGV+ IP + + D T+ +  NLIA EQ     T  +I DY  +++ L+N
Sbjct: 273 TVSCLMEIKFINGVLEIPPLTIEDTTDSLLGNLIAFEQCCNRFTPHYITDYVILMEYLIN 332

Query: 396 TANDVAFLESNGIIENGLGSNEEVAQMINNIENEVV--TESHYYGALIQDLNDYYSRPCH 569
           +  DVA L   GII N LG NE V+ +   +  EVV  ++   +  L +D+N Y+    H
Sbjct: 333 SPKDVALLSRYGIINNLLGDNEGVSHLFKKLGKEVVFNSDKFQFSNLCRDVNKYHKTRWH 392

Query: 570 QWMAKLRRDYFNNPWTIISLCAAFFLLVCTLIQTVCSVISVRR 698
            W A LRRDYFNNPW IIS   A  LL  TLIQTVCS++S+++
Sbjct: 393 IWRATLRRDYFNNPWAIISFIGAVLLLFFTLIQTVCSLLSLKK 435


>ref|XP_002515544.1| conserved hypothetical protein [Ricinus communis]
           gi|223545488|gb|EEF46993.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 439

 Score =  171 bits (433), Expect = 2e-40
 Identities = 94/221 (42%), Positives = 132/221 (59%), Gaps = 2/221 (0%)
 Frame = +3

Query: 36  KMGQPDHFIRSSCDDIKHLLDILRVYFVPSTTRIPTTETAKVRRIPSATTLHESGVKFNM 215
           ++G+  H +R S  ++ H +D LR+   P   R    E  K     S+T L E+GVKF +
Sbjct: 216 QLGRASHPMRRS--EVNHFVDFLRLCHQPIKPRQTPRENRKFEMTRSSTELREAGVKFKV 273

Query: 216 GTTNCFLDITFTNGVINIPTMRVADRTEWVFRNLIAMEQSQEDTTTFIGDYFYILDSLVN 395
            +T   LDI F +GV+ IP +RV++ TE  FRNLIA EQ     T++I DY  I+DSL+N
Sbjct: 274 ASTTHLLDIQFNDGVLEIPYIRVSEITEAFFRNLIAFEQC-HCHTSYISDYIVIMDSLIN 332

Query: 396 TANDVAFLESNGIIENGLGSNEEVAQMINNIENEVVTESH--YYGALIQDLNDYYSRPCH 569
           T +DV  L   GI++  L +N E + + NN+  E++ +SH  YY  L +DLN +     H
Sbjct: 333 TPHDVEVLVKYGIMKVMLANNVEASTLFNNLAKEILYDSHVFYYSLLCEDLNTFCKVRWH 392

Query: 570 QWMAKLRRDYFNNPWTIISLCAAFFLLVCTLIQTVCSVISV 692
           +W A L+ +YFN PWT IS+ A   LLV T IQ VCS+I V
Sbjct: 393 RWKATLKHNYFNTPWTAISVIAGVILLVLTFIQAVCSIIQV 433


>ref|XP_002324850.1| predicted protein [Populus trichocarpa] gi|222866284|gb|EEF03415.1|
           predicted protein [Populus trichocarpa]
          Length = 410

 Score =  171 bits (432), Expect = 2e-40
 Identities = 86/206 (41%), Positives = 130/206 (63%), Gaps = 2/206 (0%)
 Frame = +3

Query: 81  IKHLLDILRVYFVPSTTRIPTTETAKVRRIPSATTLHESGVKFNMGTTNCFLDITFTNGV 260
           ++HL+D L +   P  ++  + +  K   IPSAT LH++GVKF +G++    DI F NG+
Sbjct: 208 VQHLVDFLWICHQPPQSK--SKKKLKTLGIPSATELHQAGVKFKLGSSKNLFDIKFKNGI 265

Query: 261 INIPTMRVADRTEWVFRNLIAMEQSQEDTTTFIGDYFYILDSLVNTANDVAFLESNGIIE 440
           + IP + +   TE +FRNL+A EQ    +  +I DY  I++ LVNTA DV  L  +GI+E
Sbjct: 266 LEIPRLEIVGATELLFRNLLAFEQCH-CSKNYINDYVIIINHLVNTAKDVELLVKDGIVE 324

Query: 441 NGLGSNEEVAQMINNIENE--VVTESHYYGALIQDLNDYYSRPCHQWMAKLRRDYFNNPW 614
           N L  +E ++ + + +  E  V+ +  Y+  L+++LN Y  +P H+W A L++ YFNNPW
Sbjct: 325 NWLWDDEGMSALFHGLVKETFVIVDHFYFSGLVEELNAYCRKPWHKWQATLKQHYFNNPW 384

Query: 615 TIISLCAAFFLLVCTLIQTVCSVISV 692
           +IIS  AA  LLV T IQ VCS++SV
Sbjct: 385 SIISFIAAVILLVLTTIQAVCSILSV 410


>ref|XP_002515541.1| conserved hypothetical protein [Ricinus communis]
           gi|223545485|gb|EEF46990.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 433

 Score =  165 bits (418), Expect = 9e-39
 Identities = 86/212 (40%), Positives = 124/212 (58%), Gaps = 2/212 (0%)
 Frame = +3

Query: 63  RSSCDDIKHLLDILRVYFVPSTTRIPTTETAKVRRIPSATTLHESGVKFNMGTTNCFLDI 242
           +S  +  KH  D+LR + +P       T+  K+  I SAT L  +GVKF + +T C L +
Sbjct: 220 KSPQEGAKHFTDMLRSFLLPWCKSSEPTDDDKMLYIHSATELQGAGVKFKVSSTKCLLRL 279

Query: 243 TFTNGVINIPTMRVADRTEWVFRNLIAMEQSQEDTTTFIGDYFYILDSLVNTANDVAFLE 422
            FT+ V+ IP  R+  RTE + RNL+A+EQ      T+I DY +++D L+NT NDV  L 
Sbjct: 280 QFTDQVLEIPRFRIHSRTESILRNLMALEQCLYPCNTYICDYIFLMDCLINTENDVDLLI 339

Query: 423 SNGIIENGLGSNEEVAQMINNIENEVV--TESHYYGALIQDLNDYYSRPCHQWMAKLRRD 596
              II NGLG++ EVA ++NN+   +       +Y  + ++LN+YY    H W A   RD
Sbjct: 340 DKKIIVNGLGNSSEVATLLNNLCKHITLCEGCFFYSKISEELNNYYEVLWHSWNATFIRD 399

Query: 597 YFNNPWTIISLCAAFFLLVCTLIQTVCSVISV 692
           YF NPW   S  AA  LL+ TL+QT+ S+IS+
Sbjct: 400 YFGNPWLTASTIAAVVLLILTLVQTIFSIISL 431


>ref|XP_002513460.1| conserved hypothetical protein [Ricinus communis]
           gi|223547368|gb|EEF48863.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 410

 Score =  164 bits (414), Expect = 3e-38
 Identities = 80/206 (38%), Positives = 128/206 (62%), Gaps = 2/206 (0%)
 Frame = +3

Query: 81  IKHLLDILRVYFVPSTTRIPTTETAKVRRIPSATTLHESGVKFNMGTTNCFLDITFTNGV 260
           I+H++D LRV   P   ++   +  K   IPS T LH++GVKF +G++   L+I F  G+
Sbjct: 205 IEHMVDFLRVCQQPP--KLQNRKKLKKLIIPSVTELHQAGVKFELGSSRKLLNIKFNRGI 262

Query: 261 INIPTMRVADRTEWVFRNLIAMEQSQEDTTTFIGDYFYILDSLVNTANDVAFLESNGIIE 440
           + +P++++ D TE + RNL A EQ   D   ++ DY  ++  LV    DV  L  NGIIE
Sbjct: 263 LKVPSLQIDDNTEILLRNLQAFEQCLCDRGNYVSDYISLVSLLVKAPKDVDLLAQNGIIE 322

Query: 441 NGLGSNEEVAQMINNIENE--VVTESHYYGALIQDLNDYYSRPCHQWMAKLRRDYFNNPW 614
           N L ++E V+ +   +E E  ++ +  Y+ +L+++LN Y   P ++W A L++DYFN PW
Sbjct: 323 NWLVNSEGVSTLFQKLEQENLLIPDDFYFSSLVEELNSYCKNPWNKWKATLKQDYFNTPW 382

Query: 615 TIISLCAAFFLLVCTLIQTVCSVISV 692
            +IS+ AA  LL+ T+IQ+VCS++ V
Sbjct: 383 AVISVIAAAILLILTVIQSVCSILQV 408


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