BLASTX nr result

ID: Coptis24_contig00009011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009011
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15895.3| unnamed protein product [Vitis vinifera]               76   3e-12
ref|XP_002892378.1| F10K1.23 [Arabidopsis lyrata subsp. lyrata] ...    69   5e-10
ref|XP_003599330.1| hypothetical protein MTR_3g031720 [Medicago ...    67   2e-09
gb|AAF82214.1|AC067971_22 F10K1.23 [Arabidopsis thaliana]              65   6e-09
ref|XP_003599329.1| hypothetical protein MTR_3g031680 [Medicago ...    65   6e-09

>emb|CBI15895.3| unnamed protein product [Vitis vinifera]
          Length = 298

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 47/105 (44%), Positives = 60/105 (57%), Gaps = 9/105 (8%)
 Frame = -1

Query: 288 IAVKGCESVFSCIQANNVVHAGA---------VEEIKRLKDVAVTLVSSHSVQAQTAEQL 136
           +A K CE+    +Q N++    A         +E+IKRLKDVA+  V S SVQAQ  E L
Sbjct: 189 VAAKACENALLSLQMNDIAEHRADELSGNVQIIEKIKRLKDVALASVVSLSVQAQATEHL 248

Query: 135 KKKEIQLDKMKSSVPTASRCVASSIFRDGIKKRNMRKLHELQRLQ 1
           KKK  Q  K        + C+AS++F  GIKK+N RKL E QRLQ
Sbjct: 249 KKKN-QKSKKNFLFNKGAHCLASTLFTSGIKKQNARKLLEHQRLQ 292


>ref|XP_002892378.1| F10K1.23 [Arabidopsis lyrata subsp. lyrata]
           gi|297338220|gb|EFH68637.1| F10K1.23 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 251

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/74 (43%), Positives = 52/74 (70%)
 Frame = -1

Query: 222 AVEEIKRLKDVAVTLVSSHSVQAQTAEQLKKKEIQLDKMKSSVPTASRCVASSIFRDGIK 43
           A E+++RL+D A +L SSHSVQA+ AE L+ KE+++   ++     + C  S++FR+GIK
Sbjct: 166 AAEKVRRLRDSAASLTSSHSVQARGAEYLRSKELRIQTRQTLPTKNTDCTGSNLFREGIK 225

Query: 42  KRNMRKLHELQRLQ 1
           KRN R L +L+ ++
Sbjct: 226 KRNERMLQDLRSIR 239


>ref|XP_003599330.1| hypothetical protein MTR_3g031720 [Medicago truncatula]
           gi|355488378|gb|AES69581.1| hypothetical protein
           MTR_3g031720 [Medicago truncatula]
          Length = 292

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 38/106 (35%), Positives = 61/106 (57%), Gaps = 11/106 (10%)
 Frame = -1

Query: 288 IAVKGCESVFSCIQANNV-----------VHAGAVEEIKRLKDVAVTLVSSHSVQAQTAE 142
           +AVK CE+   CI  ++V           + A  + EI RL++ ++  ++S SVQ Q  E
Sbjct: 134 VAVKACENALRCIGNSDVQKLGRDVISDNLKANTISEITRLRNFSLASITSRSVQVQATE 193

Query: 141 QLKKKEIQLDKMKSSVPTASRCVASSIFRDGIKKRNMRKLHELQRL 4
            L++K  +  K+        RC+AS+ FR+GIK++NMRKL++ Q L
Sbjct: 194 YLERKTREQQKLDLPYKE-KRCLASTSFRNGIKRQNMRKLYKRQTL 238


>gb|AAF82214.1|AC067971_22 F10K1.23 [Arabidopsis thaliana]
          Length = 277

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/74 (43%), Positives = 49/74 (66%)
 Frame = -1

Query: 222 AVEEIKRLKDVAVTLVSSHSVQAQTAEQLKKKEIQLDKMKSSVPTASRCVASSIFRDGIK 43
           A E+++RL+D A +L SSHSVQAQ A  L+ KE ++   ++       C  S++FR+GIK
Sbjct: 192 AAEKVRRLRDSAASLTSSHSVQAQGAGYLRSKEHRIQSRQTLPTKNPDCTGSNLFREGIK 251

Query: 42  KRNMRKLHELQRLQ 1
           KRN R L +L+ ++
Sbjct: 252 KRNERMLQDLRSIR 265


>ref|XP_003599329.1| hypothetical protein MTR_3g031680 [Medicago truncatula]
           gi|355488377|gb|AES69580.1| hypothetical protein
           MTR_3g031680 [Medicago truncatula]
          Length = 265

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 15/110 (13%)
 Frame = -1

Query: 288 IAVKGCESVFSCIQANNV-----------VHAGAVEEIKRLKDVAVTLVSSHS---VQAQ 151
           ++VK CE+   CI  NNV           + A A+ EI RL++ A+T ++S S      Q
Sbjct: 134 VSVKACENALRCIGNNNVQKLGRDAIPENLKANAISEITRLRNFALTSITSRSGISSLVQ 193

Query: 150 TAEQLKKKEIQLDKMKSSVP-TASRCVASSIFRDGIKKRNMRKLHELQRL 4
             E L +K    ++ K  +P    RC+AS+ FR+GIK++NMRKL+E Q L
Sbjct: 194 ATEYLDRKT--RERQKLDLPYKEKRCLASTSFRNGIKRQNMRKLYERQNL 241


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