BLASTX nr result
ID: Coptis24_contig00008952
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008952 (207 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_564250.1| peptidyl-prolyl cis-trans isomerase NIMA-intera... 114 8e-24 ref|XP_002893399.1| peptidyl-prolyl cis-trans isomerase PPIC-typ... 114 8e-24 emb|CBI15202.3| unnamed protein product [Vitis vinifera] 114 8e-24 ref|XP_002284794.1| PREDICTED: peptidyl-prolyl cis-trans isomera... 114 8e-24 ref|XP_002284796.1| PREDICTED: peptidyl-prolyl cis-trans isomera... 114 8e-24 >ref|NP_564250.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Arabidopsis thaliana] gi|9797744|gb|AAF98562.1|AC013427_5 Contains similarity to peptidyl-prolyl cis-trans isomerase EPVH from Homo sapiens gb|AF143096 and contains a Rotamase (PPIC-type PPIASE) PF|00639 domain. ESTs gb|T45176, gb|F14479, gb|AA586142, gb|F14459, gb|AI997648 come from this gene [Arabidopsis thaliana] gi|12083236|gb|AAG48777.1|AF332414_1 unknown protein [Arabidopsis thaliana] gi|21553425|gb|AAM62518.1| unknown [Arabidopsis thaliana] gi|332192582|gb|AEE30703.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Arabidopsis thaliana] Length = 142 Score = 114 bits (285), Expect = 8e-24 Identities = 51/55 (92%), Positives = 55/55 (100%) Frame = +1 Query: 43 AADGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLNNGDKVPPAEFAKLASEYS 207 AADGLGTCTYVKARH+LCEKQGKINEAYKKLQDGWL+NGDKVPPAEFAK+A+EYS Sbjct: 33 AADGLGTCTYVKARHVLCEKQGKINEAYKKLQDGWLSNGDKVPPAEFAKIAAEYS 87 >ref|XP_002893399.1| peptidyl-prolyl cis-trans isomerase PPIC-type family protein [Arabidopsis lyrata subsp. lyrata] gi|297339241|gb|EFH69658.1| peptidyl-prolyl cis-trans isomerase PPIC-type family protein [Arabidopsis lyrata subsp. lyrata] Length = 142 Score = 114 bits (285), Expect = 8e-24 Identities = 51/55 (92%), Positives = 55/55 (100%) Frame = +1 Query: 43 AADGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLNNGDKVPPAEFAKLASEYS 207 AADGLGTCTYVKARH+LCEKQGKINEAYKKLQDGWL+NGDKVPPAEFAK+A+EYS Sbjct: 33 AADGLGTCTYVKARHVLCEKQGKINEAYKKLQDGWLSNGDKVPPAEFAKIAAEYS 87 >emb|CBI15202.3| unnamed protein product [Vitis vinifera] Length = 175 Score = 114 bits (285), Expect = 8e-24 Identities = 52/55 (94%), Positives = 55/55 (100%) Frame = +1 Query: 43 AADGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLNNGDKVPPAEFAKLASEYS 207 +ADGLGTCTYVKARHILCEKQGKINEAYKKLQDGWL+NGDKVPPAEFAKLA+EYS Sbjct: 66 SADGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYS 120 >ref|XP_002284794.1| PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like isoform 1 [Vitis vinifera] Length = 144 Score = 114 bits (285), Expect = 8e-24 Identities = 52/55 (94%), Positives = 55/55 (100%) Frame = +1 Query: 43 AADGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLNNGDKVPPAEFAKLASEYS 207 +ADGLGTCTYVKARHILCEKQGKINEAYKKLQDGWL+NGDKVPPAEFAKLA+EYS Sbjct: 35 SADGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYS 89 >ref|XP_002284796.1| PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like isoform 2 [Vitis vinifera] Length = 158 Score = 114 bits (285), Expect = 8e-24 Identities = 52/55 (94%), Positives = 55/55 (100%) Frame = +1 Query: 43 AADGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLNNGDKVPPAEFAKLASEYS 207 +ADGLGTCTYVKARHILCEKQGKINEAYKKLQDGWL+NGDKVPPAEFAKLA+EYS Sbjct: 49 SADGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYS 103