BLASTX nr result

ID: Coptis24_contig00008952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008952
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_564250.1| peptidyl-prolyl cis-trans isomerase NIMA-intera...   114   8e-24
ref|XP_002893399.1| peptidyl-prolyl cis-trans isomerase PPIC-typ...   114   8e-24
emb|CBI15202.3| unnamed protein product [Vitis vinifera]              114   8e-24
ref|XP_002284794.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   114   8e-24
ref|XP_002284796.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   114   8e-24

>ref|NP_564250.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Arabidopsis
           thaliana] gi|9797744|gb|AAF98562.1|AC013427_5 Contains
           similarity to peptidyl-prolyl cis-trans isomerase EPVH
           from Homo sapiens gb|AF143096 and contains a Rotamase
           (PPIC-type PPIASE) PF|00639 domain. ESTs gb|T45176,
           gb|F14479, gb|AA586142, gb|F14459, gb|AI997648 come from
           this gene [Arabidopsis thaliana]
           gi|12083236|gb|AAG48777.1|AF332414_1 unknown protein
           [Arabidopsis thaliana] gi|21553425|gb|AAM62518.1|
           unknown [Arabidopsis thaliana]
           gi|332192582|gb|AEE30703.1| peptidyl-prolyl cis-trans
           isomerase NIMA-interacting 4 [Arabidopsis thaliana]
          Length = 142

 Score =  114 bits (285), Expect = 8e-24
 Identities = 51/55 (92%), Positives = 55/55 (100%)
 Frame = +1

Query: 43  AADGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLNNGDKVPPAEFAKLASEYS 207
           AADGLGTCTYVKARH+LCEKQGKINEAYKKLQDGWL+NGDKVPPAEFAK+A+EYS
Sbjct: 33  AADGLGTCTYVKARHVLCEKQGKINEAYKKLQDGWLSNGDKVPPAEFAKIAAEYS 87


>ref|XP_002893399.1| peptidyl-prolyl cis-trans isomerase PPIC-type family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297339241|gb|EFH69658.1| peptidyl-prolyl cis-trans
           isomerase PPIC-type family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 142

 Score =  114 bits (285), Expect = 8e-24
 Identities = 51/55 (92%), Positives = 55/55 (100%)
 Frame = +1

Query: 43  AADGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLNNGDKVPPAEFAKLASEYS 207
           AADGLGTCTYVKARH+LCEKQGKINEAYKKLQDGWL+NGDKVPPAEFAK+A+EYS
Sbjct: 33  AADGLGTCTYVKARHVLCEKQGKINEAYKKLQDGWLSNGDKVPPAEFAKIAAEYS 87


>emb|CBI15202.3| unnamed protein product [Vitis vinifera]
          Length = 175

 Score =  114 bits (285), Expect = 8e-24
 Identities = 52/55 (94%), Positives = 55/55 (100%)
 Frame = +1

Query: 43  AADGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLNNGDKVPPAEFAKLASEYS 207
           +ADGLGTCTYVKARHILCEKQGKINEAYKKLQDGWL+NGDKVPPAEFAKLA+EYS
Sbjct: 66  SADGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYS 120


>ref|XP_002284794.1| PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting
           4-like isoform 1 [Vitis vinifera]
          Length = 144

 Score =  114 bits (285), Expect = 8e-24
 Identities = 52/55 (94%), Positives = 55/55 (100%)
 Frame = +1

Query: 43  AADGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLNNGDKVPPAEFAKLASEYS 207
           +ADGLGTCTYVKARHILCEKQGKINEAYKKLQDGWL+NGDKVPPAEFAKLA+EYS
Sbjct: 35  SADGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYS 89


>ref|XP_002284796.1| PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting
           4-like isoform 2 [Vitis vinifera]
          Length = 158

 Score =  114 bits (285), Expect = 8e-24
 Identities = 52/55 (94%), Positives = 55/55 (100%)
 Frame = +1

Query: 43  AADGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLNNGDKVPPAEFAKLASEYS 207
           +ADGLGTCTYVKARHILCEKQGKINEAYKKLQDGWL+NGDKVPPAEFAKLA+EYS
Sbjct: 49  SADGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYS 103


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