BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008934
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285135.1| PREDICTED: pentatricopeptide repeat-containi...   108   6e-22
emb|CAN70199.1| hypothetical protein VITISV_021220 [Vitis vinifera]   108   6e-22
ref|XP_002885974.1| hypothetical protein ARALYDRAFT_480424 [Arab...   105   4e-21
ref|NP_565377.1| pentatricopeptide repeat-containing protein [Ar...   103   1e-20
ref|XP_002518774.1| pentatricopeptide repeat-containing protein,...   103   1e-20

>ref|XP_002285135.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15690
           [Vitis vinifera]
          Length = 593

 Score =  108 bits (269), Expect = 6e-22
 Identities = 47/77 (61%), Positives = 62/77 (80%)
 Frame = -3

Query: 231 LLNNLIEMYGKCESMNEAKQVFERMLDRDLDSWHAMMNGYAANGLGDDGLHLFEEMRKLG 52
           L N ++EMYG C SM +A++VF+ M +RD+DSWH M+NGYA N +GDDGL L+E+MRKLG
Sbjct: 285 LNNKVLEMYGNCGSMTDARRVFDHMANRDMDSWHLMINGYANNAMGDDGLQLYEQMRKLG 344

Query: 51  LKLNEKTFLAVFAACGS 1
           L+ NE+TFLAV + C S
Sbjct: 345 LEPNEQTFLAVLSTCAS 361


>emb|CAN70199.1| hypothetical protein VITISV_021220 [Vitis vinifera]
          Length = 627

 Score =  108 bits (269), Expect = 6e-22
 Identities = 47/77 (61%), Positives = 62/77 (80%)
 Frame = -3

Query: 231 LLNNLIEMYGKCESMNEAKQVFERMLDRDLDSWHAMMNGYAANGLGDDGLHLFEEMRKLG 52
           L N ++EMYG C SM +A++VF+ M +RD+DSWH M+NGYA N +GDDGL L+E+MRKLG
Sbjct: 319 LNNKVLEMYGNCGSMTDARRVFDHMTNRDMDSWHLMINGYANNAMGDDGLQLYEQMRKLG 378

Query: 51  LKLNEKTFLAVFAACGS 1
           L+ NE+TFLAV + C S
Sbjct: 379 LEPNEQTFLAVLSTCAS 395


>ref|XP_002885974.1| hypothetical protein ARALYDRAFT_480424 [Arabidopsis lyrata subsp.
           lyrata] gi|297331814|gb|EFH62233.1| hypothetical protein
           ARALYDRAFT_480424 [Arabidopsis lyrata subsp. lyrata]
          Length = 548

 Score =  105 bits (262), Expect = 4e-21
 Identities = 47/77 (61%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
 Frame = -3

Query: 228 LNNL-IEMYGKCESMNEAKQVFERMLDRDLDSWHAMMNGYAANGLGDDGLHLFEEMRKLG 52
           LNN+ I M+G+C S+ +AK+VF+ M+D+D+DSWH MM  Y+ NG+GDD LHLFEEM K G
Sbjct: 242 LNNMVISMFGECRSVTDAKRVFDHMVDKDMDSWHLMMRAYSDNGMGDDALHLFEEMTKQG 301

Query: 51  LKLNEKTFLAVFAACGS 1
           LK NE+TFL VF AC +
Sbjct: 302 LKPNEETFLTVFLACAT 318


>ref|NP_565377.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75216221|sp|Q9ZQE5.2|PP153_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g15690 gi|14335136|gb|AAK59848.1| At2g15690/F9O13.24
           [Arabidopsis thaliana] gi|20197709|gb|AAD17413.2|
           Expressed protein [Arabidopsis thaliana]
           gi|29028728|gb|AAO64743.1| At2g15690/F9O13.24
           [Arabidopsis thaliana] gi|330251336|gb|AEC06430.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 579

 Score =  103 bits (258), Expect = 1e-20
 Identities = 47/77 (61%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
 Frame = -3

Query: 228 LNNL-IEMYGKCESMNEAKQVFERMLDRDLDSWHAMMNGYAANGLGDDGLHLFEEMRKLG 52
           LNN+ I M+G+C S+ +AK+VF+ M+D+D+DSWH MM  Y+ NG+GDD LHLFEEM K G
Sbjct: 273 LNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHG 332

Query: 51  LKLNEKTFLAVFAACGS 1
           LK NE+TFL VF AC +
Sbjct: 333 LKPNEETFLTVFLACAT 349


>ref|XP_002518774.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542155|gb|EEF43699.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 573

 Score =  103 bits (258), Expect = 1e-20
 Identities = 47/77 (61%), Positives = 60/77 (77%)
 Frame = -3

Query: 231 LLNNLIEMYGKCESMNEAKQVFERMLDRDLDSWHAMMNGYAANGLGDDGLHLFEEMRKLG 52
           L   +IEMYGKC SM +A++VF+ M DRD+D WH M+NGYA+N LGD+GL LFE+MR+ G
Sbjct: 331 LNKKVIEMYGKCGSMTDARRVFDHMKDRDIDLWHLMINGYASNNLGDEGLQLFEQMRQSG 390

Query: 51  LKLNEKTFLAVFAACGS 1
           LK   +TFLAV +AC S
Sbjct: 391 LKPTAETFLAVLSACAS 407