BLASTX nr result

ID: Coptis24_contig00008832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008832
         (1079 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275283.1| PREDICTED: gamma-interferon-inducible lysoso...   296   5e-78
ref|XP_002275261.1| PREDICTED: gamma-interferon-inducible lysoso...   295   2e-77
emb|CAN76152.1| hypothetical protein VITISV_012674 [Vitis vinifera]   293   4e-77
ref|XP_003538315.1| PREDICTED: gamma-interferon-inducible lysoso...   271   2e-70
ref|XP_002313228.1| predicted protein [Populus trichocarpa] gi|2...   271   2e-70

>ref|XP_002275283.1| PREDICTED: gamma-interferon-inducible lysosomal thiol reductase
           isoform 2 [Vitis vinifera] gi|297745847|emb|CBI15903.3|
           unnamed protein product [Vitis vinifera]
          Length = 259

 Score =  296 bits (759), Expect = 5e-78
 Identities = 131/222 (59%), Positives = 168/222 (75%)
 Frame = +1

Query: 190 SDKVKLALYYETLCPYCSNFMVNYLPKIFTNGLIDIIDLNLVPYGNAKVGSDNIITCQHG 369
           SDKV L LYYE+LCPY +NF++NYL KIF NGLI I+DLNLVP+GNAK+  +N I CQHG
Sbjct: 29  SDKVSLGLYYESLCPYSANFIINYLVKIFENGLISIVDLNLVPFGNAKIRGNNTIDCQHG 88

Query: 370 PYECVLNTVEACAIHVWPDLNKHYKFIYCVERLVVEHKYSEWKSCFGKTGLNSKPIEACY 549
           P EC+LNTVEACAI VWPDL++H+ FIYC+E LV E KY +W++CF K GL+ KPI  CY
Sbjct: 89  PAECLLNTVEACAIDVWPDLSQHFSFIYCIETLVYERKYPQWETCFEKLGLDPKPISDCY 148

Query: 550 NSGLGKQLDLRYAKETNELQPPHHYVPWVTVNGEPLHDDYYNFITFVCKAYKGSRVPKAC 729
           NSG GK+L+L+YA ETN LQPPH YVPWV V+G+PL+++Y NFI+++CKAYKG  +P AC
Sbjct: 149 NSGYGKELELKYAAETNGLQPPHKYVPWVVVDGQPLYEEYENFISYICKAYKGPSIPSAC 208

Query: 730 KDQRPQIVSEAKENQNKPVCYAEETASSSSPKTNIRSSVASW 855
            +     + +   N   PVCY EET   +   + I S++ +W
Sbjct: 209 NELSLNTIVKENVNPAGPVCYTEETIKPTL-SSIIGSTIKAW 249


>ref|XP_002275261.1| PREDICTED: gamma-interferon-inducible lysosomal thiol reductase
           isoform 1 [Vitis vinifera]
          Length = 284

 Score =  295 bits (754), Expect = 2e-77
 Identities = 131/224 (58%), Positives = 170/224 (75%), Gaps = 2/224 (0%)
 Frame = +1

Query: 190 SDKVKLALYYETLCPYCSNFMVNYLPKIFTNG--LIDIIDLNLVPYGNAKVGSDNIITCQ 363
           ++KV LALYYETLCPYCSNF+VN+L K+F NG  L+ I+DL L+PYGNAK+G +  ITCQ
Sbjct: 52  AEKVPLALYYETLCPYCSNFIVNHLIKLFNNGDGLVSIVDLKLLPYGNAKIGPNGTITCQ 111

Query: 364 HGPYECVLNTVEACAIHVWPDLNKHYKFIYCVERLVVEHKYSEWKSCFGKTGLNSKPIEA 543
           HGP EC+LNTVEACAI VWPDL++H+ FIYC+E LV E KY +W++CF K GL+ KPI  
Sbjct: 112 HGPAECLLNTVEACAIDVWPDLSQHFSFIYCIETLVYERKYPQWETCFEKLGLDPKPISD 171

Query: 544 CYNSGLGKQLDLRYAKETNELQPPHHYVPWVTVNGEPLHDDYYNFITFVCKAYKGSRVPK 723
           CYNSG GK+L+L+YA ETN LQPPH YVPWV V+G+PL+++Y NFI+++CKAYKG  +P 
Sbjct: 172 CYNSGYGKELELKYAAETNGLQPPHKYVPWVVVDGQPLYEEYENFISYICKAYKGPSIPS 231

Query: 724 ACKDQRPQIVSEAKENQNKPVCYAEETASSSSPKTNIRSSVASW 855
           AC +     + +   N   PVCY EET   +   + I S++ +W
Sbjct: 232 ACNELSLNTIVKENVNPAGPVCYTEETIKPTL-SSIIGSTIKAW 274


>emb|CAN76152.1| hypothetical protein VITISV_012674 [Vitis vinifera]
          Length = 259

 Score =  293 bits (751), Expect = 4e-77
 Identities = 130/222 (58%), Positives = 167/222 (75%)
 Frame = +1

Query: 190 SDKVKLALYYETLCPYCSNFMVNYLPKIFTNGLIDIIDLNLVPYGNAKVGSDNIITCQHG 369
           SDKV L LYYE+LCPY +NF++NYL KIF NGLI I+ LNLVP+GNAK+  +N I CQHG
Sbjct: 29  SDKVSLGLYYESLCPYSANFIINYLVKIFENGLISIVXLNLVPFGNAKIRGNNTIDCQHG 88

Query: 370 PYECVLNTVEACAIHVWPDLNKHYKFIYCVERLVVEHKYSEWKSCFGKTGLNSKPIEACY 549
           P EC+LNTVEACAI VWPDL++H+ FIYC+E LV E KY +W++CF K GL+ KPI  CY
Sbjct: 89  PAECLLNTVEACAIDVWPDLSQHFSFIYCIETLVYEXKYPQWETCFEKLGLDPKPISDCY 148

Query: 550 NSGLGKQLDLRYAKETNELQPPHHYVPWVTVNGEPLHDDYYNFITFVCKAYKGSRVPKAC 729
           NSG GK+L+L+YA ETN LQPPH YVPWV V+G+PL+++Y NFI+++CKAYKG  +P AC
Sbjct: 149 NSGYGKELELKYAAETNGLQPPHKYVPWVVVDGQPLYEEYENFISYICKAYKGPSIPSAC 208

Query: 730 KDQRPQIVSEAKENQNKPVCYAEETASSSSPKTNIRSSVASW 855
            +     + +   N   PVCY EET   +   + I S++ +W
Sbjct: 209 NELSLNTIVKENVNPAGPVCYTEETIKPTL-SSIIGSTIKAW 249


>ref|XP_003538315.1| PREDICTED: gamma-interferon-inducible lysosomal thiol
           reductase-like [Glycine max]
          Length = 241

 Score =  271 bits (694), Expect = 2e-70
 Identities = 124/226 (54%), Positives = 164/226 (72%)
 Frame = +1

Query: 178 PTAASDKVKLALYYETLCPYCSNFMVNYLPKIFTNGLIDIIDLNLVPYGNAKVGSDNIIT 357
           P+ + DKV L LYYE+LCPY +NF+VN+LPKIFT  L  I+ L LVP+GNAK+ ++    
Sbjct: 18  PSESHDKVSLELYYESLCPYSANFIVNHLPKIFTPDLAPIVHLKLVPWGNAKLRANATFD 77

Query: 358 CQHGPYECVLNTVEACAIHVWPDLNKHYKFIYCVERLVVEHKYSEWKSCFGKTGLNSKPI 537
           CQHGPYEC+LNTVEACAIH+WP L+KH+ FIYCVE LV + K  EW+SCF K  L+S+PI
Sbjct: 78  CQHGPYECLLNTVEACAIHIWPQLSKHFPFIYCVEDLVFQSKREEWESCFEKLDLDSEPI 137

Query: 538 EACYNSGLGKQLDLRYAKETNELQPPHHYVPWVTVNGEPLHDDYYNFITFVCKAYKGSRV 717
             CYNS  GKQL+L+YA ET+ L+PPH YVPWV V+GEPL++DY NF++++CKAYKG+  
Sbjct: 138 NQCYNSEHGKQLELQYAAETSALEPPHKYVPWVVVDGEPLYEDYENFLSYLCKAYKGTVT 197

Query: 718 PKACKDQRPQIVSEAKENQNKPVCYAEETASSSSPKTNIRSSVASW 855
           P++C   +   + E        VCY +     +  K  +RS++ASW
Sbjct: 198 PQSC--TQASYLREVNAKPKHSVCYKDSGIMLTWEK--VRSTIASW 239


>ref|XP_002313228.1| predicted protein [Populus trichocarpa] gi|222849636|gb|EEE87183.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  271 bits (693), Expect = 2e-70
 Identities = 120/223 (53%), Positives = 158/223 (70%), Gaps = 1/223 (0%)
 Frame = +1

Query: 190 SDKVKLALYYETLCPYCSNFMVNYLPKIFTNG-LIDIIDLNLVPYGNAKVGSDNIITCQH 366
           SDKV LALYYE+LCPY +NF+VNYL K+  +  L+ I+DL L P+GNAK+  ++   CQH
Sbjct: 33  SDKVSLALYYESLCPYSANFIVNYLDKLVEDDDLLSIVDLYLSPWGNAKIRGNDTFVCQH 92

Query: 367 GPYECVLNTVEACAIHVWPDLNKHYKFIYCVERLVVEHKYSEWKSCFGKTGLNSKPIEAC 546
           GPYEC+LNTVEACAIH WP L  H+ F+YCVE+LV E KY EW+SCF + GL+ K +  C
Sbjct: 93  GPYECLLNTVEACAIHAWPKLEDHFPFVYCVEKLVYERKYPEWESCFEELGLDPKRVSEC 152

Query: 547 YNSGLGKQLDLRYAKETNELQPPHHYVPWVTVNGEPLHDDYYNFITFVCKAYKGSRVPKA 726
           Y  G G +L+L YA ETN LQPPH YVPWV V+G+P+++DY +FI ++CKAYKG+  PKA
Sbjct: 153 YTGGYGNELELEYAAETNALQPPHKYVPWVVVDGQPIYEDYEDFINYICKAYKGTATPKA 212

Query: 727 CKDQRPQIVSEAKENQNKPVCYAEETASSSSPKTNIRSSVASW 855
           C +Q    +  AK     PVCY +   S+     ++RS+ + W
Sbjct: 213 CSNQSRHSIPRAKAKSIPPVCYRDTIVSTL--LESVRSATSLW 253


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