BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008798
         (723 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q41387.1|PSBW_SPIOL RecName: Full=Photosystem II reaction cen...   127   2e-27
ref|XP_002307627.1| hypothetical protein POPTRDRAFT_715100 [Popu...   126   5e-27
ref|NP_001235636.1| uncharacterized protein LOC100306223 [Glycin...   124   2e-26
ref|NP_001236684.1| uncharacterized protein LOC100305788 [Glycin...   122   8e-26
gb|ABK96462.1| unknown [Populus trichocarpa x Populus deltoides]      120   2e-25

>sp|Q41387.1|PSBW_SPIOL RecName: Full=Photosystem II reaction center W protein,
           chloroplastic; AltName: Full=PSII 6.1 kDa protein;
           Flags: Precursor gi|728716|emb|CAA59409.1| protein of
           photosystem II [Spinacia oleracea]
          Length = 137

 Score =  127 bits (320), Expect = 2e-27
 Identities = 67/123 (54%), Positives = 81/123 (65%), Gaps = 4/123 (3%)
 Frame = -1

Query: 606 MATSTAITPTSSFVGAAIVRNASIGVSSAPVLGLPSMARRGRVSCSAEKMPSSSES---- 439
           MAT TA +  S    A++V N+ +GVSS+P+LGLPSM +R +V+CS E  PS++E+    
Sbjct: 1   MATITASSSASLVARASLVHNSRVGVSSSPILGLPSMTKRSKVTCSIENKPSTTETTTTT 60

Query: 438 GLRMGXXXXXXXXXXXXXXXXXXLVDERMTTEGTGLPFGLSNNLLGWILFGVFGLIWTLY 259
              MG                  LVDERM+TEGTGLPFGLSNNLLGWILFGVFGLIW LY
Sbjct: 61  NKSMGASLLAAAAAATISNPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWALY 120

Query: 258 FTY 250
           F Y
Sbjct: 121 FVY 123


>ref|XP_002307627.1| hypothetical protein POPTRDRAFT_715100 [Populus trichocarpa]
           gi|118486017|gb|ABK94852.1| unknown [Populus
           trichocarpa] gi|222857076|gb|EEE94623.1| hypothetical
           protein POPTRDRAFT_715100 [Populus trichocarpa]
          Length = 134

 Score =  126 bits (316), Expect = 5e-27
 Identities = 71/120 (59%), Positives = 78/120 (65%), Gaps = 1/120 (0%)
 Frame = -1

Query: 606 MATSTA-ITPTSSFVGAAIVRNASIGVSSAPVLGLPSMARRGRVSCSAEKMPSSSESGLR 430
           MAT TA  T TSS V AA+V   S+GVS +PVLGLP+MA++GRVSCS E  PS  E    
Sbjct: 1   MATITASTTTTSSLVRAALVHKPSLGVSCSPVLGLPAMAKKGRVSCSMEGKPSVEEKCKG 60

Query: 429 MGXXXXXXXXXXXXXXXXXXLVDERMTTEGTGLPFGLSNNLLGWILFGVFGLIWTLYFTY 250
           M                   LVDERM+TEGTGLPFGLSNNLL WIL GVF LIW LYFTY
Sbjct: 61  MSASLMAAVCAASMSSPALALVDERMSTEGTGLPFGLSNNLLVWILLGVFALIWALYFTY 120


>ref|NP_001235636.1| uncharacterized protein LOC100306223 [Glycine max]
           gi|255627917|gb|ACU14303.1| unknown [Glycine max]
          Length = 132

 Score =  124 bits (312), Expect = 2e-26
 Identities = 67/119 (56%), Positives = 78/119 (65%)
 Frame = -1

Query: 606 MATSTAITPTSSFVGAAIVRNASIGVSSAPVLGLPSMARRGRVSCSAEKMPSSSESGLRM 427
           MAT  A  PT+S   A +V    +G SS+ VLGLP+MA+ G+V CS E+ PSSS S + M
Sbjct: 1   MATIIAGIPTTSITRAGLVLKRPVGASSSTVLGLPAMAKAGKVRCSMEEKPSSS-SNIGM 59

Query: 426 GXXXXXXXXXXXXXXXXXXLVDERMTTEGTGLPFGLSNNLLGWILFGVFGLIWTLYFTY 250
           G                  LVDER++TEGTGLPFGLSNNLLGWILFGVFGLIW LYF Y
Sbjct: 60  GASLLAAAVAATMSSPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFVY 118


>ref|NP_001236684.1| uncharacterized protein LOC100305788 [Glycine max]
           gi|255626603|gb|ACU13646.1| unknown [Glycine max]
          Length = 136

 Score =  122 bits (306), Expect = 8e-26
 Identities = 70/123 (56%), Positives = 79/123 (64%), Gaps = 4/123 (3%)
 Frame = -1

Query: 606 MATSTAITPTSSFVGAAIVRNASIGVSSAPVLGLPSMARRGRVSCSAEKMPSS----SES 439
           MAT +A   T S   A +V+  S+G SS PVLGLP+M + GRVSCS E+ PSS    S S
Sbjct: 1   MATISAAITTPSITRACLVQKRSLGFSS-PVLGLPAMGKVGRVSCSMEEKPSSVKESSSS 59

Query: 438 GLRMGXXXXXXXXXXXXXXXXXXLVDERMTTEGTGLPFGLSNNLLGWILFGVFGLIWTLY 259
            L MG                  LVDER++TEGTGLPFGLSNNLLGWILFGVFGLIW LY
Sbjct: 60  MLGMGASLMAAASAAAMSGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALY 119

Query: 258 FTY 250
           F Y
Sbjct: 120 FVY 122


>gb|ABK96462.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 133

 Score =  120 bits (302), Expect = 2e-25
 Identities = 64/119 (53%), Positives = 76/119 (63%)
 Frame = -1

Query: 606 MATSTAITPTSSFVGAAIVRNASIGVSSAPVLGLPSMARRGRVSCSAEKMPSSSESGLRM 427
           MAT TA T TSS V AA+    S+GVSS+ VLGLP++A++G+VSCS E  P+  E    M
Sbjct: 1   MATITASTATSSIVRAALAHRPSVGVSSSHVLGLPAIAKKGKVSCSMEGKPTVEEKSKGM 60

Query: 426 GXXXXXXXXXXXXXXXXXXLVDERMTTEGTGLPFGLSNNLLGWILFGVFGLIWTLYFTY 250
                              LVDER++TEGTGLPFGLSNNLL WIL GVF  IW+LYF Y
Sbjct: 61  SASLMAAVCAATISSPALALVDERLSTEGTGLPFGLSNNLLVWILLGVFAFIWSLYFVY 119